Wall clock time and date at job start Tue Mar 31 2020 11:57:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42893 * 114.00117 * 2 1 4 4 C 1.53003 * 109.47375 * 179.97438 * 3 2 1 5 5 N 1.46499 * 109.47116 * 64.99708 * 4 3 2 6 6 C 1.36881 * 119.99641 * 282.31552 * 5 4 3 7 7 H 1.08001 * 120.00241 * 315.10071 * 6 5 4 8 8 C 1.39044 * 120.00087 * 135.10915 * 6 5 4 9 9 N 1.31370 * 119.99919 * 338.05896 * 8 6 5 10 10 Si 1.86794 * 120.00212 * 158.05665 * 8 6 5 11 11 H 1.48493 * 109.47330 * 65.00117 * 10 8 6 12 12 H 1.48499 * 109.47173 * 185.00343 * 10 8 6 13 13 H 1.48507 * 109.47005 * 305.00143 * 10 8 6 14 14 C 1.34775 * 119.99887 * 102.31594 * 5 4 3 15 15 O 1.21609 * 119.99683 * 186.71857 * 14 5 4 16 16 C 1.47666 * 120.00249 * 6.71267 * 14 5 4 17 17 C 1.39706 * 120.13082 * 323.47796 * 16 14 5 18 18 C 1.37864 * 119.88291 * 180.02562 * 17 16 14 19 19 C 1.38520 * 120.15563 * 359.97438 * 18 17 16 20 20 Cl 1.73593 * 119.86785 * 180.27658 * 19 18 17 21 21 C 1.38621 * 120.26495 * 0.02562 * 19 18 17 22 22 Cl 1.73601 * 119.94370 * 180.02562 * 21 19 18 23 23 C 1.38009 * 120.11020 * 359.97438 * 21 19 18 24 24 H 1.09003 * 109.46678 * 60.00719 * 1 2 3 25 25 H 1.08999 * 109.46755 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.46913 * 300.00395 * 1 2 3 27 27 H 1.09007 * 109.47452 * 59.99630 * 3 2 1 28 28 H 1.09005 * 109.46785 * 299.99698 * 3 2 1 29 29 H 1.09003 * 109.46576 * 304.99553 * 4 3 2 30 30 H 1.08995 * 109.46948 * 184.99973 * 4 3 2 31 31 H 0.96993 * 119.99994 * 185.04911 * 9 8 6 32 32 H 1.07997 * 120.05798 * 0.04302 * 17 16 14 33 33 H 1.07997 * 119.92031 * 180.02562 * 18 17 16 34 34 H 1.07997 * 120.07535 * 179.97438 * 23 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 0.0006 5 7 3.9768 0.5639 -1.2508 6 6 3.8594 -0.7891 -1.4222 7 1 4.1531 -1.4614 -0.6296 8 6 3.3622 -1.2980 -2.6168 9 7 2.6196 -0.5428 -3.3940 10 14 3.7502 -3.0555 -3.1168 11 1 3.1274 -3.9943 -2.1494 12 1 3.2100 -3.3143 -4.4756 13 1 5.2218 -3.2550 -3.1228 14 6 4.4982 1.3249 -2.2333 15 8 4.7510 0.8313 -3.3156 16 6 4.7625 2.7582 -1.9957 17 6 3.8915 3.5099 -1.2031 18 6 4.1429 4.8478 -0.9850 19 6 5.2568 5.4476 -1.5493 20 17 5.5700 7.1310 -1.2639 21 6 6.1251 4.7076 -2.3367 22 17 7.5189 5.4676 -3.0393 23 6 5.8840 3.3676 -2.5622 24 1 -0.3633 0.5137 -0.8901 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 1.6886 1.8464 0.8900 28 1 1.6887 1.8463 -0.8901 29 1 3.8508 0.5685 0.8428 30 1 3.9785 2.1765 0.0902 31 1 2.2124 -0.9187 -4.1900 32 1 3.0231 3.0437 -0.7618 33 1 3.4703 5.4294 -0.3721 34 1 6.5607 2.7918 -3.1762 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000318946858.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:57:34 Heat of formation + Delta-G solvation = -28.719745 kcal Electronic energy + Delta-G solvation = -22402.331902 eV Core-core repulsion = 18774.943832 eV Total energy + Delta-G solvation = -3627.388070 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -39.85585 -37.99246 -36.95411 -36.44097 -36.21312 -34.36065 -32.28501 -30.82755 -30.29214 -28.93010 -25.83743 -25.10087 -23.07856 -22.68996 -21.95556 -19.73126 -17.48742 -16.89254 -16.41538 -15.61476 -15.58278 -15.22248 -14.95619 -14.36401 -14.26693 -14.06633 -13.80182 -13.63362 -13.10862 -12.82216 -12.50508 -11.83310 -11.79903 -11.61121 -11.46536 -11.38166 -11.07485 -11.03372 -10.86341 -10.81202 -10.74299 -10.54842 -10.44057 -10.15129 -9.00167 -8.81342 -8.74359 -8.52920 -8.16746 -7.21272 -6.13952 -3.80002 0.95425 1.25018 1.91524 2.28317 3.31371 3.39265 3.41610 3.43144 4.23297 4.35503 4.47162 4.71713 4.79535 5.11612 5.23091 5.35676 5.38172 5.53008 5.67272 5.75702 5.80670 5.86003 5.87732 5.92178 6.01492 6.12373 6.15735 6.23661 6.50290 6.56670 6.73278 7.62922 7.86279 8.22481 8.96393 9.06262 9.56658 10.14339 10.94487 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.017196 B = 0.004532 C = 0.003740 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1627.879539 B = 6176.620276 C = 7485.551192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.347 6.347 3 C 0.053 3.947 4 C 0.078 3.922 5 N -0.425 5.425 6 C -0.325 4.325 7 H 0.082 0.918 8 C 0.080 3.920 9 N -0.816 5.816 10 Si 0.910 3.090 11 H -0.278 1.278 12 H -0.287 1.287 13 H -0.273 1.273 14 C 0.490 3.510 15 O -0.525 6.525 16 C -0.069 4.069 17 C -0.110 4.110 18 C -0.104 4.104 19 C -0.038 4.038 20 Cl -0.064 7.064 21 C -0.031 4.031 22 Cl -0.059 7.059 23 C -0.065 4.065 24 H 0.035 0.965 25 H 0.077 0.923 26 H 0.025 0.975 27 H 0.037 0.963 28 H 0.048 0.952 29 H 0.069 0.931 30 H 0.091 0.909 31 H 0.264 0.736 32 H 0.154 0.846 33 H 0.140 0.860 34 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.406 10.901 7.037 12.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.264 6.264 3 C -0.025 4.025 4 C -0.046 4.046 5 N -0.144 5.144 6 C -0.452 4.452 7 H 0.100 0.900 8 C -0.132 4.132 9 N -0.448 5.448 10 Si 0.738 3.262 11 H -0.204 1.204 12 H -0.213 1.213 13 H -0.199 1.199 14 C 0.278 3.722 15 O -0.404 6.404 16 C -0.074 4.074 17 C -0.129 4.129 18 C -0.123 4.123 19 C -0.066 4.066 20 Cl -0.035 7.035 21 C -0.059 4.059 22 Cl -0.030 7.030 23 C -0.085 4.085 24 H 0.054 0.946 25 H 0.096 0.904 26 H 0.044 0.956 27 H 0.055 0.945 28 H 0.066 0.934 29 H 0.088 0.912 30 H 0.109 0.891 31 H 0.074 0.926 32 H 0.171 0.829 33 H 0.158 0.842 34 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 0.737 10.681 6.231 12.388 hybrid contribution -0.210 -0.232 -0.305 0.437 sum 0.528 10.449 5.927 12.024 Atomic orbital electron populations 1.22612 0.83190 1.01891 0.98543 1.88186 1.17467 1.25920 1.94845 1.22897 0.95192 0.86007 0.98413 1.22254 0.92113 0.99241 0.91006 1.43109 1.51880 1.07150 1.12301 1.18864 1.44657 0.79647 1.02034 0.89990 1.25182 0.93334 0.98162 0.96501 1.69814 1.25064 1.36548 1.13425 0.86305 0.79170 0.83227 0.77535 1.20420 1.21270 1.19865 1.17712 0.83524 0.84072 0.86886 1.90666 1.54066 1.72492 1.23181 1.20739 0.94136 0.96936 0.95576 1.22045 1.00471 0.92871 0.97484 1.20928 0.95906 0.94925 1.00554 1.20765 0.97689 0.85859 1.02312 1.98356 1.95495 1.14517 1.95108 1.20600 0.91465 0.93355 1.00458 1.98363 1.40229 1.81554 1.82855 1.21044 0.97577 0.91352 0.98494 0.94648 0.90432 0.95619 0.94459 0.93435 0.91249 0.89115 0.92583 0.82929 0.84175 0.83511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.55 11.01 101.05 1.11 1.67 16 2 O -0.35 -6.96 9.60 -35.23 -0.34 -7.30 16 3 C 0.05 0.92 5.22 37.16 0.19 1.11 16 4 C 0.08 1.43 5.34 -4.04 -0.02 1.41 16 5 N -0.42 -10.07 2.53 -115.94 -0.29 -10.37 16 6 C -0.33 -8.59 8.12 -15.00 -0.12 -8.71 16 7 H 0.08 2.13 7.92 -52.49 -0.42 1.71 16 8 C 0.08 2.19 4.26 -17.45 -0.07 2.12 16 9 N -0.82 -23.34 11.86 55.50 0.66 -22.68 16 10 Si 0.91 21.60 29.61 -169.99 -5.03 16.57 16 11 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 12 H -0.29 -6.83 7.11 56.52 0.40 -6.42 16 13 H -0.27 -6.55 7.11 56.52 0.40 -6.15 16 14 C 0.49 11.96 6.83 -12.41 -0.08 11.88 16 15 O -0.53 -15.10 14.47 5.27 0.08 -15.03 16 16 C -0.07 -1.34 5.43 -104.97 -0.57 -1.91 16 17 C -0.11 -1.73 7.37 -39.17 -0.29 -2.02 16 18 C -0.10 -1.39 9.81 -39.61 -0.39 -1.78 16 19 C -0.04 -0.54 6.33 -39.34 -0.25 -0.79 16 20 Cl -0.06 -0.79 27.94 -51.86 -1.45 -2.24 16 21 C -0.03 -0.49 6.32 -39.52 -0.25 -0.73 16 22 Cl -0.06 -0.83 27.94 -51.86 -1.45 -2.28 16 23 C -0.06 -1.15 9.40 -39.14 -0.37 -1.52 16 24 H 0.03 0.57 8.14 -51.93 -0.42 0.15 16 25 H 0.08 1.15 8.14 -51.93 -0.42 0.73 16 26 H 0.03 0.33 8.14 -51.93 -0.42 -0.09 16 27 H 0.04 0.51 8.14 -51.93 -0.42 0.08 16 28 H 0.05 0.88 7.11 -51.93 -0.37 0.51 16 29 H 0.07 1.23 8.13 -51.93 -0.42 0.81 16 30 H 0.09 1.42 4.11 -51.93 -0.21 1.21 16 31 H 0.26 7.32 8.31 -40.82 -0.34 6.98 16 32 H 0.15 2.30 3.44 -52.49 -0.18 2.12 16 33 H 0.14 1.44 8.06 -52.49 -0.42 1.02 16 34 H 0.15 2.66 8.02 -52.49 -0.42 2.24 16 LS Contribution 318.38 15.07 4.80 4.80 Total: -1.00 -31.43 318.38 -7.41 -38.84 By element: Atomic # 1 Polarization: 2.23 SS G_CDS: -3.27 Total: -1.04 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -1.11 Total: 0.72 kcal Atomic # 7 Polarization: -33.41 SS G_CDS: 0.37 Total: -33.04 kcal Atomic # 8 Polarization: -22.06 SS G_CDS: -0.26 Total: -22.32 kcal Atomic # 14 Polarization: 21.60 SS G_CDS: -5.03 Total: 16.57 kcal Atomic # 17 Polarization: -1.62 SS G_CDS: -2.90 Total: -4.52 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -31.43 -7.41 -38.84 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000318946858.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.121 kcal (2) G-P(sol) polarization free energy of solvation -31.430 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.309 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.411 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.841 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds