Wall clock time and date at job start Tue Mar 31 2020 11:47:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09005 * 109.47048 * 2 1 4 4 O 1.42897 * 109.47442 * 240.00240 * 2 1 3 5 5 C 1.35919 * 117.00306 * 85.13175 * 4 2 1 6 6 C 1.38748 * 120.03363 * 354.69685 * 5 4 2 7 7 C 1.38140 * 119.98150 * 179.97438 * 6 5 4 8 8 C 1.38360 * 120.05275 * 359.97438 * 7 6 5 9 9 Cl 1.73600 * 119.95928 * 179.97438 * 8 7 6 10 10 C 1.38462 * 120.07306 * 359.97438 * 8 7 6 11 11 Cl 1.73599 * 119.98762 * 180.02562 * 10 8 7 12 12 C 1.38264 * 120.01855 * 359.75316 * 10 8 7 13 13 C 1.50700 * 109.47364 * 119.99820 * 2 1 3 14 14 O 1.21294 * 119.99959 * 115.00137 * 13 2 1 15 15 N 1.34779 * 120.00117 * 295.00606 * 13 2 1 16 16 C 1.46500 * 119.99746 * 359.97438 * 15 13 2 17 17 C 1.37097 * 119.99893 * 179.97438 * 15 13 2 18 18 H 1.07998 * 119.99825 * 20.66614 * 17 15 13 19 19 C 1.38952 * 119.99843 * 200.66359 * 17 15 13 20 20 N 1.31410 * 119.99908 * 14.21237 * 19 17 15 21 21 Si 1.86798 * 119.99911 * 194.20942 * 19 17 15 22 22 H 1.48496 * 109.47227 * 90.00477 * 21 19 17 23 23 H 1.48507 * 109.46795 * 210.00139 * 21 19 17 24 24 H 1.48498 * 109.46981 * 329.99770 * 21 19 17 25 25 H 1.09005 * 109.47048 * 179.97438 * 1 2 3 26 26 H 1.08996 * 109.46969 * 60.00177 * 1 2 3 27 27 H 1.08997 * 109.47572 * 299.99902 * 1 2 3 28 28 H 1.08006 * 120.01184 * 359.97438 * 6 5 4 29 29 H 1.07995 * 119.97116 * 180.02562 * 7 6 5 30 30 H 1.08004 * 120.03118 * 180.24917 * 12 10 8 31 31 H 1.09004 * 109.46892 * 93.10553 * 16 15 13 32 32 H 1.09004 * 109.46783 * 213.09597 * 16 15 13 33 33 H 1.08994 * 109.47429 * 333.10073 * 16 15 13 34 34 H 0.96997 * 120.00092 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 8 2.0064 -0.6736 -1.1668 5 6 2.1152 0.0634 -2.3036 6 6 1.6678 1.3766 -2.3254 7 6 1.7795 2.1248 -3.4812 8 6 2.3376 1.5660 -4.6172 9 17 2.4761 2.5082 -6.0686 10 6 2.7858 0.2560 -4.5976 11 17 3.4863 -0.4427 -6.0240 12 6 2.6806 -0.4938 -3.4408 13 6 2.0324 -0.7104 1.2305 14 8 2.6531 -1.7467 1.1215 15 7 1.7919 -0.1942 2.4520 16 6 1.0425 1.0578 2.5836 17 6 2.2485 -0.8407 3.5714 18 1 3.0590 -1.5500 3.4924 19 6 1.6684 -0.5833 4.8076 20 7 0.5199 0.0516 4.8750 21 14 2.5213 -1.1399 6.3735 22 1 3.4268 -0.0649 6.8529 23 1 1.5034 -1.4306 7.4150 24 1 3.3115 -2.3665 6.0976 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 0.5138 0.8899 28 1 1.2324 1.8138 -1.4389 29 1 1.4315 3.1471 -3.4979 30 1 3.0338 -1.5143 -3.4241 31 1 -0.0154 0.8351 2.7230 32 1 1.4131 1.6143 3.4445 33 1 1.1722 1.6554 1.6814 34 1 0.1148 0.2310 5.7378 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000337519662.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:47:15 Heat of formation + Delta-G solvation = -45.152509 kcal Electronic energy + Delta-G solvation = -21620.629763 eV Core-core repulsion = 17992.529115 eV Total energy + Delta-G solvation = -3628.100648 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -40.54870 -38.86000 -37.61849 -36.68285 -36.20678 -34.78180 -32.50227 -31.41561 -30.63486 -29.58814 -26.40455 -25.27009 -23.87077 -23.20801 -22.12022 -19.37855 -18.51655 -17.05648 -16.69132 -16.51433 -16.00205 -15.42215 -15.07219 -14.71737 -14.41773 -14.13722 -14.01000 -13.72608 -13.50982 -12.86845 -12.63355 -12.42494 -12.07570 -12.04955 -11.75842 -11.58692 -11.39192 -11.30609 -11.23655 -11.08968 -10.95393 -10.84776 -10.59707 -10.42088 -10.32566 -9.16095 -9.14440 -8.55110 -8.21980 -7.85550 -6.44702 -3.99642 0.79322 0.97049 1.65936 2.00745 3.07434 3.09470 3.20269 3.26793 3.30399 3.66641 4.07048 4.41984 4.68893 4.69306 4.84508 4.95228 5.03151 5.06990 5.33578 5.40789 5.49270 5.55909 5.79357 5.82199 5.88914 6.04245 6.08160 6.18424 6.34553 6.68035 7.04391 7.31393 7.46245 7.97168 8.34089 9.04367 9.24819 9.79035 10.59079 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.031821 B = 0.002808 C = 0.002670 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 879.721606 B = 9970.134920 C =10483.411347 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.073 3.927 3 H 0.086 0.914 4 O -0.273 6.273 5 C 0.163 3.837 6 C -0.200 4.200 7 C -0.055 4.055 8 C -0.079 4.079 9 Cl -0.059 7.059 10 C 0.011 3.989 11 Cl -0.047 7.047 12 C -0.138 4.138 13 C 0.447 3.553 14 O -0.568 6.568 15 N -0.437 5.437 16 C 0.106 3.894 17 C -0.308 4.308 18 H 0.102 0.898 19 C 0.033 3.967 20 N -0.880 5.880 21 Si 0.929 3.071 22 H -0.277 1.277 23 H -0.283 1.283 24 H -0.268 1.268 25 H 0.072 0.928 26 H 0.062 0.938 27 H 0.091 0.909 28 H 0.147 0.853 29 H 0.144 0.856 30 H 0.152 0.848 31 H 0.066 0.934 32 H 0.072 0.928 33 H 0.026 0.974 34 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.607 7.395 -15.932 17.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.014 3.986 3 H 0.103 0.897 4 O -0.184 6.184 5 C 0.115 3.885 6 C -0.219 4.219 7 C -0.074 4.074 8 C -0.107 4.107 9 Cl -0.030 7.030 10 C -0.017 4.017 11 Cl -0.018 7.018 12 C -0.158 4.158 13 C 0.233 3.767 14 O -0.450 6.450 15 N -0.157 5.157 16 C -0.038 4.038 17 C -0.435 4.435 18 H 0.120 0.880 19 C -0.171 4.171 20 N -0.519 5.519 21 Si 0.755 3.245 22 H -0.203 1.203 23 H -0.209 1.209 24 H -0.192 1.192 25 H 0.091 0.909 26 H 0.081 0.919 27 H 0.110 0.890 28 H 0.165 0.835 29 H 0.162 0.838 30 H 0.169 0.831 31 H 0.084 0.916 32 H 0.090 0.910 33 H 0.044 0.956 34 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -0.314 6.753 -16.017 17.385 hybrid contribution 0.148 0.154 0.673 0.706 sum -0.166 6.907 -15.344 16.827 Atomic orbital electron populations 1.22446 0.93233 1.04448 1.03566 1.22398 0.95452 0.96538 0.84250 0.89663 1.86291 1.79681 1.36787 1.15612 1.19010 0.92219 0.89949 0.87288 1.21474 1.06338 0.94144 0.99981 1.20779 0.96308 1.00246 0.90024 1.20528 1.08208 0.91668 0.90257 1.98364 1.96905 1.71898 1.35865 1.20343 0.99975 0.91987 0.89384 1.98387 1.82255 1.83975 1.37154 1.20200 1.04210 1.01991 0.89390 1.19407 0.86897 0.86845 0.83533 1.90569 1.44344 1.24534 1.85604 1.43470 1.48066 1.20132 1.04052 1.21700 0.97700 0.85652 0.98704 1.19708 1.16166 1.24026 0.83626 0.88000 1.25336 0.95043 0.97076 0.99650 1.69987 1.14817 1.40998 1.26112 0.85875 0.78852 0.79304 0.80429 1.20256 1.20861 1.19236 0.90868 0.91883 0.89040 0.83509 0.83801 0.83051 0.91613 0.90960 0.95590 0.92051 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.70 8.88 37.16 0.33 -2.38 16 2 C 0.07 1.30 1.82 -27.88 -0.05 1.25 16 3 H 0.09 1.30 5.28 -51.93 -0.27 1.02 16 4 O -0.27 -4.94 9.34 -39.35 -0.37 -5.30 16 5 C 0.16 2.37 6.60 -39.23 -0.26 2.12 16 6 C -0.20 -2.38 8.25 -39.43 -0.33 -2.71 16 7 C -0.05 -0.57 9.82 -39.57 -0.39 -0.96 16 8 C -0.08 -0.91 6.32 -39.45 -0.25 -1.16 16 9 Cl -0.06 -0.62 27.95 -51.86 -1.45 -2.07 16 10 C 0.01 0.13 6.32 -39.49 -0.25 -0.12 16 11 Cl -0.05 -0.53 27.95 -51.86 -1.45 -1.98 16 12 C -0.14 -1.86 9.77 -39.41 -0.38 -2.25 16 13 C 0.45 10.61 7.05 -10.98 -0.08 10.54 16 14 O -0.57 -15.89 16.18 -14.31 -0.23 -16.12 16 15 N -0.44 -10.63 3.02 -122.19 -0.37 -11.00 16 16 C 0.11 2.15 7.17 59.85 0.43 2.58 16 17 C -0.31 -8.27 9.31 -14.93 -0.14 -8.41 16 18 H 0.10 2.90 7.39 -52.49 -0.39 2.51 16 19 C 0.03 0.82 5.07 -17.47 -0.09 0.74 16 20 N -0.88 -22.17 10.65 55.50 0.59 -21.58 16 21 Si 0.93 20.00 29.58 -169.99 -5.03 14.98 16 22 H -0.28 -5.83 7.11 56.52 0.40 -5.43 16 23 H -0.28 -6.02 7.11 56.52 0.40 -5.62 16 24 H -0.27 -5.85 7.11 56.52 0.40 -5.45 16 25 H 0.07 1.20 8.14 -51.93 -0.42 0.78 16 26 H 0.06 0.76 6.94 -51.93 -0.36 0.39 16 27 H 0.09 1.36 5.18 -51.93 -0.27 1.09 16 28 H 0.15 1.53 5.44 -52.48 -0.29 1.25 16 29 H 0.14 1.14 8.06 -52.49 -0.42 0.72 16 30 H 0.15 1.96 8.06 -52.48 -0.42 1.54 16 31 H 0.07 1.36 6.60 -51.93 -0.34 1.02 16 32 H 0.07 1.56 7.08 -51.93 -0.37 1.19 16 33 H 0.03 0.41 5.86 -51.93 -0.30 0.11 16 34 H 0.27 6.43 8.31 -40.82 -0.34 6.09 16 LS Contribution 314.70 15.07 4.74 4.74 Total: -1.00 -29.87 314.70 -8.01 -37.88 By element: Atomic # 1 Polarization: 4.22 SS G_CDS: -2.99 Total: 1.23 kcal Atomic # 6 Polarization: 0.68 SS G_CDS: -1.45 Total: -0.77 kcal Atomic # 7 Polarization: -32.80 SS G_CDS: 0.22 Total: -32.57 kcal Atomic # 8 Polarization: -20.83 SS G_CDS: -0.60 Total: -21.43 kcal Atomic # 14 Polarization: 20.00 SS G_CDS: -5.03 Total: 14.98 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -2.90 Total: -4.05 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -29.87 -8.01 -37.88 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000337519662.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.273 kcal (2) G-P(sol) polarization free energy of solvation -29.870 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.143 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.879 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.153 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds