Wall clock time and date at job start Tue Mar 31 2020 11:47:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09004 * 109.46670 * 2 1 4 4 O 1.42897 * 109.47106 * 239.99867 * 2 1 3 5 5 C 1.35918 * 117.00013 * 84.83382 * 4 2 1 6 6 C 1.38750 * 120.03653 * 174.59864 * 5 4 2 7 7 C 1.38139 * 119.98254 * 180.02562 * 6 5 4 8 8 C 1.38357 * 120.05572 * 359.74651 * 7 6 5 9 9 Cl 1.73596 * 119.96731 * 180.25594 * 8 7 6 10 10 C 1.38461 * 120.06996 * 0.50694 * 8 7 6 11 11 Cl 1.73606 * 119.99211 * 179.76866 * 10 8 7 12 12 C 1.38277 * 120.02133 * 359.49403 * 10 8 7 13 13 C 1.50702 * 109.47187 * 119.99429 * 2 1 3 14 14 O 1.21278 * 119.99644 * 120.00181 * 13 2 1 15 15 N 1.34776 * 120.00124 * 300.00579 * 13 2 1 16 16 C 1.46497 * 119.99657 * 179.97438 * 15 13 2 17 17 C 1.50704 * 109.46848 * 179.97438 * 16 15 13 18 18 H 1.08001 * 119.99679 * 0.02562 * 17 16 15 19 19 C 1.37876 * 119.99932 * 180.02562 * 17 16 15 20 20 N 1.31510 * 120.00187 * 359.97438 * 19 17 16 21 21 Si 1.86797 * 119.99815 * 180.02562 * 19 17 16 22 22 H 1.48497 * 109.47684 * 59.99648 * 21 19 17 23 23 H 1.48504 * 109.46873 * 179.97438 * 21 19 17 24 24 H 1.48502 * 109.47315 * 299.99182 * 21 19 17 25 25 H 1.09004 * 109.46670 * 179.97438 * 1 2 3 26 26 H 1.08993 * 109.47444 * 299.99974 * 1 2 3 27 27 H 1.09004 * 109.47375 * 60.00789 * 1 2 3 28 28 H 1.07996 * 120.00884 * 0.04423 * 6 5 4 29 29 H 1.08000 * 119.97317 * 180.02562 * 7 6 5 30 30 H 1.08000 * 120.02879 * 180.27519 * 12 10 8 31 31 H 0.96996 * 119.99808 * 0.02562 * 15 13 2 32 32 H 1.08988 * 109.47599 * 299.99896 * 16 15 13 33 33 H 1.09001 * 109.47173 * 59.99881 * 16 15 13 34 34 H 0.97000 * 120.00692 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0277 0.0000 4 8 2.0063 -0.6736 -1.1667 5 6 2.1092 0.0618 -2.3051 6 6 2.6692 -0.4972 -3.4449 7 6 2.7736 0.2514 -4.6011 8 6 2.3156 1.5567 -4.6252 9 17 2.4419 2.4933 -6.0814 10 6 1.7611 2.1185 -3.4876 11 17 1.1925 3.7585 -3.5184 12 6 1.6550 1.3720 -2.3286 13 6 2.0323 -0.7103 1.2305 14 8 2.7296 -1.6963 1.1193 15 7 1.7067 -0.2498 2.4546 16 6 2.1946 -0.9407 3.6507 17 6 1.6928 -0.2298 4.8812 18 1 1.0721 0.6485 4.7820 19 6 2.0260 -0.7007 6.1335 20 7 2.7814 -1.7704 6.2542 21 14 1.4034 0.1800 7.6586 22 1 -0.0815 0.1800 7.6588 23 1 1.8981 -0.5202 8.8711 24 1 1.8985 1.5801 7.6585 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3634 0.5137 -0.8901 28 1 3.0230 -1.5174 -3.4282 29 1 3.2092 -0.1840 -5.4883 30 1 1.2185 1.8086 -1.4425 31 1 1.1487 0.5386 2.5435 32 1 1.8310 -1.9681 3.6507 33 1 3.2846 -0.9410 3.6509 34 1 3.0156 -2.1020 7.1352 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000344220102.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:47:30 Heat of formation + Delta-G solvation = -68.538622 kcal Electronic energy + Delta-G solvation = -20955.564539 eV Core-core repulsion = 17326.449793 eV Total energy + Delta-G solvation = -3629.114746 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 2.42 seconds Orbital eigenvalues (eV) -40.81852 -39.12211 -37.83763 -36.83262 -36.41087 -34.35261 -32.80324 -31.90466 -31.15666 -29.80171 -27.34938 -24.83557 -23.57582 -22.91967 -22.02347 -19.84973 -18.81427 -17.78589 -16.88174 -16.41249 -15.88294 -15.74560 -15.36894 -15.05640 -14.64603 -14.41656 -14.24687 -13.84987 -13.56980 -13.13705 -12.93092 -12.54493 -12.38042 -12.18291 -12.06550 -11.99735 -11.72062 -11.46530 -11.36019 -11.10787 -11.05994 -10.93888 -10.80102 -10.38159 -9.50188 -9.38513 -9.18745 -8.82271 -8.46879 -8.04632 -6.23327 -4.31285 0.63828 0.74756 1.52271 1.89365 2.65949 3.06121 3.13348 3.20999 3.26376 3.27512 3.93484 4.24783 4.29587 4.44432 4.65599 4.74296 4.83467 4.97656 5.05573 5.12957 5.16830 5.33254 5.47977 5.52370 5.67014 5.77095 5.95682 6.05999 6.97931 7.18539 7.26112 7.40874 7.55581 7.87661 8.43452 8.65707 8.89828 9.35246 10.86713 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.026429 B = 0.002515 C = 0.002359 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1059.172318 B =11131.087195 C =11864.810355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.060 3.940 3 H 0.097 0.903 4 O -0.272 6.272 5 C 0.159 3.841 6 C -0.135 4.135 7 C -0.057 4.057 8 C -0.076 4.076 9 Cl -0.055 7.055 10 C 0.012 3.988 11 Cl -0.047 7.047 12 C -0.199 4.199 13 C 0.504 3.496 14 O -0.531 6.531 15 N -0.704 5.704 16 C 0.251 3.749 17 C -0.547 4.547 18 H 0.063 0.937 19 C 0.065 3.935 20 N -0.884 5.884 21 Si 0.905 3.095 22 H -0.275 1.275 23 H -0.285 1.285 24 H -0.275 1.275 25 H 0.077 0.923 26 H 0.085 0.915 27 H 0.070 0.930 28 H 0.150 0.850 29 H 0.149 0.851 30 H 0.151 0.849 31 H 0.392 0.608 32 H 0.030 0.970 33 H 0.029 0.971 34 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.955 8.753 -22.225 24.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.000 4.000 3 H 0.115 0.885 4 O -0.183 6.183 5 C 0.111 3.889 6 C -0.154 4.154 7 C -0.076 4.076 8 C -0.103 4.103 9 Cl -0.026 7.026 10 C -0.016 4.016 11 Cl -0.018 7.018 12 C -0.218 4.218 13 C 0.286 3.714 14 O -0.408 6.408 15 N -0.354 5.354 16 C 0.131 3.869 17 C -0.585 4.585 18 H 0.082 0.918 19 C -0.139 4.139 20 N -0.521 5.521 21 Si 0.732 3.268 22 H -0.200 1.200 23 H -0.210 1.210 24 H -0.200 1.200 25 H 0.096 0.904 26 H 0.103 0.897 27 H 0.089 0.911 28 H 0.168 0.832 29 H 0.167 0.833 30 H 0.168 0.832 31 H 0.225 0.775 32 H 0.048 0.952 33 H 0.047 0.953 34 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -3.345 7.914 -22.209 23.813 hybrid contribution -0.687 1.277 0.899 1.706 sum -4.032 9.191 -21.310 23.555 Atomic orbital electron populations 1.22352 0.92561 1.04719 1.03769 1.22493 0.95878 0.97228 0.84353 0.88516 1.86303 1.80039 1.36527 1.15459 1.19036 0.92990 0.89324 0.87514 1.20561 1.02590 1.02036 0.90186 1.20835 0.97271 0.90947 0.98550 1.20594 1.07452 0.93986 0.88303 1.98376 1.96901 1.72576 1.34788 1.20453 0.99931 0.87500 0.93668 1.98399 1.87194 1.17540 1.98651 1.21192 1.07601 0.94278 0.98751 1.19806 0.81955 0.85472 0.84165 1.90716 1.37733 1.25930 1.86406 1.46388 1.51794 1.31379 1.05847 1.19178 0.95487 0.92939 0.79288 1.21148 1.33586 1.13307 0.90434 0.91848 1.24946 0.94762 0.94960 0.99258 1.69954 1.35410 1.22284 1.24467 0.86456 0.79159 0.79602 0.81591 1.20021 1.21019 1.20019 0.90375 0.89654 0.91088 0.83237 0.83292 0.83152 0.77539 0.95230 0.95279 0.92266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.91 9.06 37.16 0.34 -1.57 16 2 C 0.06 0.82 2.64 -27.88 -0.07 0.75 16 3 H 0.10 1.09 6.32 -51.93 -0.33 0.76 16 4 O -0.27 -3.97 9.33 -39.39 -0.37 -4.33 16 5 C 0.16 1.88 6.60 -39.23 -0.26 1.62 16 6 C -0.13 -1.36 9.99 -39.43 -0.39 -1.75 16 7 C -0.06 -0.50 9.82 -39.57 -0.39 -0.89 16 8 C -0.08 -0.74 6.32 -39.46 -0.25 -0.99 16 9 Cl -0.06 -0.51 27.95 -51.86 -1.45 -1.96 16 10 C 0.01 0.13 6.32 -39.48 -0.25 -0.12 16 11 Cl -0.05 -0.46 27.95 -51.86 -1.45 -1.91 16 12 C -0.20 -2.09 8.02 -39.40 -0.32 -2.41 16 13 C 0.50 9.64 7.23 -10.98 -0.08 9.56 16 14 O -0.53 -12.71 16.50 -14.35 -0.24 -12.94 16 15 N -0.70 -13.85 5.44 -61.48 -0.33 -14.18 16 16 C 0.25 6.39 5.43 -5.19 -0.03 6.36 16 17 C -0.55 -14.25 9.28 -34.44 -0.32 -14.57 16 18 H 0.06 1.53 7.60 -52.49 -0.40 1.13 16 19 C 0.06 1.75 5.46 -17.82 -0.10 1.65 16 20 N -0.88 -25.44 13.29 55.43 0.74 -24.70 16 21 Si 0.90 20.27 29.54 -169.99 -5.02 15.25 16 22 H -0.27 -6.02 7.11 56.52 0.40 -5.61 16 23 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 24 H -0.27 -6.03 7.11 56.52 0.40 -5.62 16 25 H 0.08 0.93 8.14 -51.93 -0.42 0.51 16 26 H 0.08 0.81 7.56 -51.93 -0.39 0.42 16 27 H 0.07 0.63 6.90 -51.93 -0.36 0.27 16 28 H 0.15 1.33 8.06 -52.49 -0.42 0.91 16 29 H 0.15 0.91 8.06 -52.49 -0.42 0.49 16 30 H 0.15 1.38 5.42 -52.49 -0.28 1.10 16 31 H 0.39 6.35 7.74 -40.82 -0.32 6.03 16 32 H 0.03 0.83 8.14 -51.94 -0.42 0.41 16 33 H 0.03 0.82 8.14 -51.93 -0.42 0.40 16 34 H 0.27 7.24 8.31 -40.82 -0.34 6.90 16 LS Contribution 327.89 15.07 4.94 4.94 Total: -1.00 -31.45 327.89 -8.63 -40.08 By element: Atomic # 1 Polarization: 5.44 SS G_CDS: -3.33 Total: 2.11 kcal Atomic # 6 Polarization: -0.23 SS G_CDS: -2.12 Total: -2.35 kcal Atomic # 7 Polarization: -39.29 SS G_CDS: 0.40 Total: -38.88 kcal Atomic # 8 Polarization: -16.67 SS G_CDS: -0.60 Total: -17.28 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.02 Total: 15.25 kcal Atomic # 17 Polarization: -0.97 SS G_CDS: -2.90 Total: -3.87 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -31.45 -8.63 -40.08 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000344220102.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.462 kcal (2) G-P(sol) polarization free energy of solvation -31.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.076 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.539 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.42 seconds