Wall clock time and date at job start Tue Mar 31 2020 11:57:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34232 * 116.99929 * 2 1 4 4 O 1.20827 * 119.99903 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00147 * 179.97438 * 3 2 1 6 6 H 1.09001 * 109.46924 * 300.00561 * 5 3 2 7 7 N 1.46896 * 109.47080 * 180.02562 * 5 3 2 8 8 C 1.46898 * 111.00459 * 85.00266 * 7 5 3 9 9 C 1.50697 * 109.47653 * 179.97438 * 8 7 5 10 10 H 1.07998 * 119.99490 * 359.97438 * 9 8 7 11 11 C 1.37871 * 120.00223 * 180.02562 * 9 8 7 12 12 N 1.31511 * 120.00142 * 359.97438 * 11 9 8 13 13 Si 1.86799 * 120.00096 * 180.02562 * 11 9 8 14 14 H 1.48503 * 109.47230 * 89.99522 * 13 11 9 15 15 H 1.48494 * 109.47374 * 209.99707 * 13 11 9 16 16 H 1.48501 * 109.47127 * 329.99928 * 13 11 9 17 17 C 1.50694 * 109.46838 * 60.00267 * 5 3 2 18 18 C 1.38244 * 119.99311 * 100.00298 * 17 5 3 19 19 C 1.38198 * 120.02608 * 179.97438 * 18 17 5 20 20 C 1.38380 * 120.01543 * 0.04422 * 19 18 17 21 21 Cl 1.73603 * 120.01071 * 180.02562 * 20 19 18 22 22 C 1.38315 * 119.98694 * 359.97438 * 20 19 18 23 23 C 1.38337 * 119.99565 * 280.04078 * 17 5 3 24 24 Cl 1.73607 * 120.00658 * 0.02562 * 23 17 5 25 25 H 1.09005 * 109.46993 * 179.97438 * 1 2 3 26 26 H 1.08995 * 109.47672 * 299.99910 * 1 2 3 27 27 H 1.09003 * 109.47076 * 60.00268 * 1 2 3 28 28 H 1.00907 * 110.99755 * 208.95742 * 7 5 3 29 29 H 1.09005 * 109.47126 * 300.00067 * 8 7 5 30 30 H 1.09000 * 109.47333 * 59.99266 * 8 7 5 31 31 H 0.96999 * 120.00624 * 180.02562 * 12 11 9 32 32 H 1.07992 * 119.98735 * 0.02562 * 18 17 5 33 33 H 1.08002 * 119.99652 * 180.02562 * 19 18 17 34 34 H 1.07996 * 120.01293 * 179.73135 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2750 0.0006 6 1 3.9557 0.7809 0.8908 7 7 3.9827 2.6836 0.0011 8 6 4.0169 3.2221 1.3674 9 6 4.4480 4.6656 1.3279 10 1 4.6743 5.1358 0.3824 11 6 4.5544 5.3856 2.4989 12 7 4.2792 4.8128 3.6503 13 14 5.0880 7.1750 2.4499 14 1 3.8919 8.0448 2.3151 15 1 5.8061 7.5120 3.7051 16 1 5.9901 7.3910 1.2902 17 6 4.1055 0.5916 -1.2295 18 6 4.4936 1.3428 -2.3233 19 6 4.9887 0.7169 -3.4516 20 6 5.0955 -0.6623 -3.4875 21 17 5.7181 -1.4484 -4.9046 22 6 4.7071 -1.4144 -2.3936 23 6 4.2115 -0.7872 -1.2644 24 17 3.7226 -1.7305 0.1086 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5138 -0.8900 28 1 4.8759 2.7968 -0.4547 29 1 3.0237 3.1512 1.8109 30 1 4.7240 2.6484 1.9665 31 1 4.3537 5.3194 4.4741 32 1 4.4105 2.4192 -2.2957 33 1 5.2921 1.3043 -4.3056 34 1 4.7862 -2.4911 -2.4228 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000411510760.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:57:42 Heat of formation + Delta-G solvation = -62.281206 kcal Electronic energy + Delta-G solvation = -21869.482510 eV Core-core repulsion = 18240.639106 eV Total energy + Delta-G solvation = -3628.843404 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.44128 -39.36328 -36.99433 -36.54195 -36.18111 -35.16360 -32.86161 -31.10943 -30.93149 -28.23651 -26.99491 -25.12550 -23.16678 -22.39284 -21.64590 -20.09986 -17.94727 -17.16999 -16.62438 -16.33132 -16.12155 -15.85258 -15.21222 -14.73356 -14.34731 -14.20155 -14.02623 -13.67969 -13.32375 -12.88243 -12.68577 -12.41325 -12.22562 -12.07013 -11.87549 -11.70337 -11.30377 -11.16739 -11.10750 -10.91280 -10.70805 -10.68599 -10.42774 -10.13138 -9.97089 -9.27937 -9.07872 -8.73581 -8.52262 -7.62772 -6.05944 -4.08019 0.74793 0.94314 1.68540 2.16892 2.66846 2.93390 3.32188 3.34320 3.38022 3.40926 4.36473 4.49096 4.55240 4.72232 4.90902 5.12186 5.24199 5.25258 5.30368 5.31376 5.36742 5.54759 5.62539 5.69052 5.73281 5.94367 6.14459 6.40802 6.70855 7.02851 7.24379 7.65409 8.01453 8.12878 8.27680 8.41778 8.98379 9.56326 11.05480 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.013459 B = 0.004146 C = 0.003522 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2079.894336 B = 6751.191015 C = 7948.570313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.357 6.357 3 C 0.464 3.536 4 O -0.467 6.467 5 C 0.136 3.864 6 H 0.092 0.908 7 N -0.665 5.665 8 C 0.194 3.806 9 C -0.513 4.513 10 H 0.064 0.936 11 C 0.057 3.943 12 N -0.897 5.897 13 Si 0.901 3.099 14 H -0.280 1.280 15 H -0.287 1.287 16 H -0.273 1.273 17 C -0.075 4.075 18 C -0.073 4.073 19 C -0.108 4.108 20 C -0.023 4.023 21 Cl -0.065 7.065 22 C -0.108 4.108 23 C -0.007 4.007 24 Cl -0.040 7.040 25 H 0.095 0.905 26 H 0.060 0.940 27 H 0.058 0.942 28 H 0.344 0.656 29 H 0.035 0.965 30 H -0.008 1.008 31 H 0.262 0.738 32 H 0.160 0.840 33 H 0.142 0.858 34 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.335 -15.494 -13.100 20.293 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.274 6.274 3 C 0.303 3.697 4 O -0.350 6.350 5 C 0.024 3.976 6 H 0.109 0.891 7 N -0.300 5.300 8 C 0.068 3.932 9 C -0.551 4.551 10 H 0.082 0.918 11 C -0.144 4.144 12 N -0.536 5.536 13 Si 0.729 3.271 14 H -0.206 1.206 15 H -0.213 1.213 16 H -0.198 1.198 17 C -0.076 4.076 18 C -0.092 4.092 19 C -0.126 4.126 20 C -0.050 4.050 21 Cl -0.036 7.036 22 C -0.127 4.127 23 C -0.034 4.034 24 Cl -0.011 7.011 25 H 0.113 0.887 26 H 0.079 0.921 27 H 0.076 0.924 28 H 0.165 0.835 29 H 0.053 0.947 30 H 0.010 0.990 31 H 0.072 0.928 32 H 0.177 0.823 33 H 0.160 0.840 34 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -1.200 -15.047 -13.018 19.933 hybrid contribution 0.772 0.411 0.515 1.015 sum -0.428 -14.636 -12.503 19.254 Atomic orbital electron populations 1.23154 0.77398 1.02925 1.02313 1.86593 1.22473 1.33568 1.84758 1.23500 0.91318 0.81434 0.73430 1.90689 1.65939 1.36088 1.42273 1.19847 0.88444 0.93499 0.95790 0.89089 1.60431 1.35133 1.09859 1.24589 1.19713 0.97110 0.94947 0.81385 1.21051 1.45369 0.95498 0.93193 0.91752 1.24962 0.95470 0.98703 0.95295 1.69954 1.49041 1.36835 0.97749 0.86449 0.78672 0.84639 0.77336 1.20583 1.21306 1.19791 1.19703 0.99954 0.91492 0.96465 1.21229 0.95425 1.01890 0.90609 1.21176 0.99810 0.92238 0.99422 1.20785 1.02115 0.92947 0.89190 1.98377 1.85645 1.80724 1.38848 1.20806 1.00290 1.00792 0.90824 1.20631 1.01116 0.91250 0.90448 1.98400 1.89593 1.71645 1.41464 0.88671 0.92100 0.92353 0.83509 0.94702 0.99043 0.92828 0.82292 0.84029 0.83833 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.45 10.56 101.05 1.07 1.52 16 2 O -0.36 -5.55 8.31 -39.26 -0.33 -5.88 16 3 C 0.46 8.70 7.12 36.01 0.26 8.96 16 4 O -0.47 -10.43 15.67 -18.75 -0.29 -10.72 16 5 C 0.14 2.42 2.23 -70.02 -0.16 2.26 16 6 H 0.09 1.64 7.01 -51.93 -0.36 1.28 16 7 N -0.67 -13.72 5.13 -110.46 -0.57 -14.29 16 8 C 0.19 5.01 5.13 -4.98 -0.03 4.99 16 9 C -0.51 -14.30 9.32 -34.44 -0.32 -14.62 16 10 H 0.06 1.74 7.81 -52.49 -0.41 1.33 16 11 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 12 N -0.90 -26.67 13.29 55.43 0.74 -25.94 16 13 Si 0.90 21.58 29.54 -169.99 -5.02 16.56 16 14 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 15 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 16 H -0.27 -6.34 7.11 56.52 0.40 -5.94 16 17 C -0.07 -1.07 4.96 -104.59 -0.52 -1.59 16 18 C -0.07 -0.94 8.87 -39.59 -0.35 -1.29 16 19 C -0.11 -1.16 9.83 -39.54 -0.39 -1.55 16 20 C -0.02 -0.25 6.32 -39.50 -0.25 -0.50 16 21 Cl -0.06 -0.62 28.96 -51.86 -1.50 -2.12 16 22 C -0.11 -1.19 9.62 -39.51 -0.38 -1.57 16 23 C -0.01 -0.09 6.14 -39.50 -0.24 -0.33 16 24 Cl -0.04 -0.51 25.57 -51.86 -1.33 -1.84 16 25 H 0.09 0.86 8.14 -51.93 -0.42 0.43 16 26 H 0.06 0.78 8.13 -51.93 -0.42 0.36 16 27 H 0.06 0.71 8.13 -51.93 -0.42 0.29 16 28 H 0.34 6.38 6.97 -39.29 -0.27 6.10 16 29 H 0.03 1.01 7.62 -51.93 -0.40 0.61 16 30 H -0.01 -0.22 8.05 -51.93 -0.42 -0.64 16 31 H 0.26 7.36 8.31 -40.82 -0.34 7.02 16 32 H 0.16 2.07 6.70 -52.49 -0.35 1.72 16 33 H 0.14 1.22 8.06 -52.49 -0.42 0.80 16 34 H 0.14 1.32 8.06 -52.49 -0.42 0.89 16 LS Contribution 326.33 15.07 4.92 4.92 Total: -1.00 -31.67 326.33 -8.25 -39.92 By element: Atomic # 1 Polarization: 5.05 SS G_CDS: -3.46 Total: 1.59 kcal Atomic # 6 Polarization: -0.79 SS G_CDS: -1.41 Total: -2.20 kcal Atomic # 7 Polarization: -40.40 SS G_CDS: 0.17 Total: -40.23 kcal Atomic # 8 Polarization: -15.99 SS G_CDS: -0.62 Total: -16.61 kcal Atomic # 14 Polarization: 21.58 SS G_CDS: -5.02 Total: 16.56 kcal Atomic # 17 Polarization: -1.13 SS G_CDS: -2.83 Total: -3.96 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -31.67 -8.25 -39.92 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000411510760.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.360 kcal (2) G-P(sol) polarization free energy of solvation -31.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.031 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.921 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.281 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds