Wall clock time and date at job start Tue Mar 31 2020 11:57:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34229 * 116.99923 * 2 1 4 4 O 1.20821 * 120.00599 * 0.02562 * 3 2 1 5 5 C 1.50707 * 119.99682 * 179.97438 * 3 2 1 6 6 H 1.09004 * 109.46904 * 60.00187 * 5 3 2 7 7 N 1.46905 * 109.47074 * 179.97438 * 5 3 2 8 8 C 1.46895 * 111.00300 * 275.00252 * 7 5 3 9 9 C 1.50697 * 109.47174 * 179.97438 * 8 7 5 10 10 H 1.07992 * 119.99940 * 359.97438 * 9 8 7 11 11 C 1.37874 * 119.99763 * 180.02562 * 9 8 7 12 12 N 1.31510 * 120.00377 * 0.02562 * 11 9 8 13 13 Si 1.86806 * 119.99926 * 179.97438 * 11 9 8 14 14 H 1.48503 * 109.46907 * 90.00199 * 13 11 9 15 15 H 1.48498 * 109.47243 * 210.00153 * 13 11 9 16 16 H 1.48498 * 109.46897 * 330.00419 * 13 11 9 17 17 C 1.50700 * 109.47464 * 300.00136 * 5 3 2 18 18 C 1.38234 * 119.99320 * 265.00057 * 17 5 3 19 19 C 1.38205 * 120.02561 * 179.97438 * 18 17 5 20 20 C 1.38385 * 120.01103 * 0.02562 * 19 18 17 21 21 Cl 1.73603 * 120.00274 * 179.97438 * 20 19 18 22 22 C 1.38304 * 119.98984 * 359.97438 * 20 19 18 23 23 C 1.38337 * 119.98929 * 84.99554 * 17 5 3 24 24 Cl 1.73599 * 120.01274 * 359.97438 * 23 17 5 25 25 H 1.08998 * 109.46989 * 300.00140 * 1 2 3 26 26 H 1.09006 * 109.46886 * 59.99869 * 1 2 3 27 27 H 1.08996 * 109.47045 * 179.97438 * 1 2 3 28 28 H 1.00896 * 110.99386 * 151.04864 * 7 5 3 29 29 H 1.09004 * 109.47001 * 300.00272 * 8 7 5 30 30 H 1.09003 * 109.47037 * 59.99938 * 8 7 5 31 31 H 0.97000 * 120.00273 * 180.02562 * 12 11 9 32 32 H 1.08002 * 119.99138 * 359.97438 * 18 17 5 33 33 H 1.07999 * 119.99496 * 180.27416 * 19 18 17 34 34 H 1.07992 * 120.01774 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4035 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 3.9564 0.7805 -0.8892 7 7 3.9830 2.6836 -0.0002 8 6 4.0182 3.2215 -1.3666 9 6 4.4481 4.6653 -1.3272 10 1 4.6723 5.1363 -0.3816 11 6 4.5541 5.3851 -2.4983 12 7 4.2797 4.8120 -3.6497 13 14 5.0864 7.1751 -2.4494 14 1 6.5653 7.2549 -2.5579 15 1 4.4667 7.9069 -3.5833 16 1 4.6503 7.7863 -1.1683 17 6 4.1048 0.5919 1.2314 18 6 4.3948 1.3328 2.3618 19 6 4.8880 0.7071 3.4910 20 6 5.0924 -0.6615 3.4905 21 17 5.7127 -1.4472 4.9089 22 6 4.8025 -1.4034 2.3598 23 6 4.3086 -0.7764 1.2296 24 17 3.9437 -1.7069 -0.1898 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 4.8757 2.7968 0.4561 29 1 4.7258 2.6474 -1.9649 30 1 3.0253 3.1504 -1.8108 31 1 4.3546 5.3184 -4.4736 32 1 4.2358 2.4011 2.3625 33 1 5.1102 1.2858 4.3754 34 1 4.9623 -2.4714 2.3588 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000411510761.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:57:45 Heat of formation + Delta-G solvation = -64.194933 kcal Electronic energy + Delta-G solvation = -21848.885884 eV Core-core repulsion = 18219.959494 eV Total energy + Delta-G solvation = -3628.926390 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.44184 -39.37026 -37.00113 -36.54754 -36.19700 -35.16179 -32.86006 -31.09993 -30.94714 -28.24105 -26.99691 -25.10514 -23.16531 -22.41749 -21.65801 -20.10596 -17.92998 -17.18469 -16.63941 -16.30199 -16.14415 -15.85413 -15.21509 -14.71935 -14.34693 -14.18068 -14.03791 -13.69503 -13.32303 -12.89808 -12.70285 -12.42612 -12.22371 -12.08020 -11.86188 -11.71885 -11.31257 -11.18505 -11.12613 -10.90694 -10.75564 -10.64958 -10.43837 -10.14591 -9.97033 -9.27162 -9.08657 -8.73883 -8.52709 -7.62240 -6.05754 -4.07787 0.74395 0.94005 1.67784 2.15671 2.66192 2.92700 3.31315 3.33427 3.37764 3.42448 4.36882 4.49105 4.54927 4.72263 4.91480 5.12062 5.23796 5.24714 5.29602 5.31466 5.35921 5.54882 5.62722 5.68244 5.72922 5.93940 6.14652 6.40769 6.69991 7.02910 7.24691 7.65658 8.01600 8.13205 8.27323 8.41950 8.98655 9.56535 11.05650 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.013381 B = 0.004127 C = 0.003546 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2092.031041 B = 6783.488421 C = 7893.948829 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.359 6.359 3 C 0.464 3.536 4 O -0.467 6.467 5 C 0.136 3.864 6 H 0.092 0.908 7 N -0.665 5.665 8 C 0.194 3.806 9 C -0.512 4.512 10 H 0.064 0.936 11 C 0.057 3.943 12 N -0.897 5.897 13 Si 0.901 3.099 14 H -0.281 1.281 15 H -0.287 1.287 16 H -0.272 1.272 17 C -0.074 4.074 18 C -0.072 4.072 19 C -0.108 4.108 20 C -0.023 4.023 21 Cl -0.065 7.065 22 C -0.108 4.108 23 C -0.006 4.006 24 Cl -0.043 7.043 25 H 0.058 0.942 26 H 0.060 0.940 27 H 0.095 0.905 28 H 0.344 0.656 29 H -0.008 1.008 30 H 0.035 0.965 31 H 0.262 0.738 32 H 0.159 0.841 33 H 0.142 0.858 34 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.374 -15.465 13.145 20.300 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.276 6.276 3 C 0.303 3.697 4 O -0.350 6.350 5 C 0.024 3.976 6 H 0.109 0.891 7 N -0.299 5.299 8 C 0.069 3.931 9 C -0.551 4.551 10 H 0.083 0.917 11 C -0.144 4.144 12 N -0.536 5.536 13 Si 0.729 3.271 14 H -0.207 1.207 15 H -0.212 1.212 16 H -0.197 1.197 17 C -0.076 4.076 18 C -0.090 4.090 19 C -0.127 4.127 20 C -0.050 4.050 21 Cl -0.036 7.036 22 C -0.127 4.127 23 C -0.034 4.034 24 Cl -0.014 7.014 25 H 0.077 0.923 26 H 0.079 0.921 27 H 0.114 0.886 28 H 0.165 0.835 29 H 0.009 0.991 30 H 0.053 0.947 31 H 0.072 0.928 32 H 0.177 0.823 33 H 0.160 0.840 34 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -1.240 -15.012 13.060 19.936 hybrid contribution 0.809 0.401 -0.530 1.047 sum -0.431 -14.611 12.529 19.252 Atomic orbital electron populations 1.23159 0.77281 1.02959 1.02338 1.86555 1.22560 1.33695 1.84774 1.23507 0.91338 0.81396 0.73415 1.90688 1.65949 1.36056 1.42278 1.19869 0.88413 0.93547 0.95817 0.89092 1.60415 1.35165 1.09801 1.24535 1.19713 0.97102 0.94945 0.81386 1.21051 1.45392 0.95460 0.93189 0.91747 1.24964 0.95459 0.98706 0.95305 1.69954 1.48961 1.36922 0.97742 0.86453 0.78488 0.84450 0.77756 1.20697 1.21235 1.19708 1.19694 0.99976 0.91641 0.96265 1.21229 0.95618 1.01812 0.90383 1.21181 0.99546 0.92327 0.99600 1.20781 1.02251 0.93095 0.88879 1.98377 1.85715 1.80712 1.38772 1.20803 1.00625 1.00822 0.90442 1.20630 1.01596 0.91429 0.89732 1.98397 1.92841 1.72370 1.37751 0.92319 0.92081 0.88639 0.83519 0.99053 0.94707 0.92831 0.82322 0.84031 0.83820 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.46 10.56 101.05 1.07 1.52 16 2 O -0.36 -5.61 9.18 -39.25 -0.36 -5.97 16 3 C 0.46 8.71 7.12 36.01 0.26 8.97 16 4 O -0.47 -10.41 15.68 -18.75 -0.29 -10.70 16 5 C 0.14 2.41 2.25 -70.01 -0.16 2.25 16 6 H 0.09 1.65 6.78 -51.93 -0.35 1.30 16 7 N -0.66 -13.72 5.09 -110.45 -0.56 -14.28 16 8 C 0.19 5.02 5.13 -4.98 -0.03 4.99 16 9 C -0.51 -14.30 9.32 -34.44 -0.32 -14.63 16 10 H 0.06 1.75 7.81 -52.49 -0.41 1.34 16 11 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 12 N -0.90 -26.69 13.29 55.43 0.74 -25.95 16 13 Si 0.90 21.59 29.54 -169.99 -5.02 16.57 16 14 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 15 H -0.29 -6.84 7.11 56.52 0.40 -6.44 16 16 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 17 C -0.07 -1.07 4.85 -104.59 -0.51 -1.58 16 18 C -0.07 -0.92 8.86 -39.59 -0.35 -1.27 16 19 C -0.11 -1.16 9.83 -39.54 -0.39 -1.55 16 20 C -0.02 -0.25 6.32 -39.50 -0.25 -0.50 16 21 Cl -0.06 -0.61 28.96 -51.86 -1.50 -2.11 16 22 C -0.11 -1.19 9.62 -39.51 -0.38 -1.57 16 23 C -0.01 -0.08 6.26 -39.50 -0.25 -0.33 16 24 Cl -0.04 -0.55 26.17 -51.86 -1.36 -1.91 16 25 H 0.06 0.71 8.13 -51.93 -0.42 0.29 16 26 H 0.06 0.79 8.13 -51.93 -0.42 0.36 16 27 H 0.10 0.86 8.14 -51.93 -0.42 0.43 16 28 H 0.34 6.41 7.26 -39.29 -0.29 6.13 16 29 H -0.01 -0.22 8.05 -51.93 -0.42 -0.64 16 30 H 0.03 1.01 7.62 -51.93 -0.40 0.61 16 31 H 0.26 7.36 8.31 -40.82 -0.34 7.03 16 32 H 0.16 2.08 6.97 -52.49 -0.37 1.71 16 33 H 0.14 1.22 8.06 -52.49 -0.42 0.80 16 34 H 0.14 1.32 8.06 -52.49 -0.42 0.90 16 LS Contribution 328.12 15.07 4.94 4.94 Total: -1.00 -31.67 328.12 -8.29 -39.96 By element: Atomic # 1 Polarization: 5.09 SS G_CDS: -3.48 Total: 1.61 kcal Atomic # 6 Polarization: -0.75 SS G_CDS: -1.40 Total: -2.15 kcal Atomic # 7 Polarization: -40.41 SS G_CDS: 0.17 Total: -40.24 kcal Atomic # 8 Polarization: -16.02 SS G_CDS: -0.65 Total: -16.67 kcal Atomic # 14 Polarization: 21.59 SS G_CDS: -5.02 Total: 16.57 kcal Atomic # 17 Polarization: -1.16 SS G_CDS: -2.86 Total: -4.02 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -31.67 -8.29 -39.96 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000411510761.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.236 kcal (2) G-P(sol) polarization free energy of solvation -31.667 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.292 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.959 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds