Wall clock time and date at job start Tue Mar 31 2020 11:47:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.09007 * 109.46953 * 2 1 4 4 O 1.42901 * 109.47334 * 119.99834 * 2 1 3 5 5 C 1.35929 * 117.00169 * 275.00760 * 4 2 1 6 6 C 1.38725 * 120.05036 * 5.48523 * 5 4 2 7 7 C 1.38154 * 119.97841 * 180.02562 * 6 5 4 8 8 C 1.38261 * 120.09076 * 359.97438 * 7 6 5 9 9 C 1.38366 * 120.10574 * 359.97438 * 8 7 6 10 10 Cl 1.73592 * 119.99031 * 179.97438 * 9 8 7 11 11 C 1.38371 * 120.01324 * 0.27254 * 9 8 7 12 12 Cl 1.73597 * 120.03870 * 179.72186 * 11 9 8 13 13 C 1.50692 * 109.47223 * 240.00196 * 2 1 3 14 14 O 1.21287 * 119.99789 * 244.99860 * 13 2 1 15 15 N 1.34773 * 120.00288 * 64.99692 * 13 2 1 16 16 C 1.46503 * 120.00234 * 180.02562 * 15 13 2 17 17 C 1.50703 * 109.47109 * 179.97438 * 16 15 13 18 18 H 1.08004 * 120.00077 * 0.02562 * 17 16 15 19 19 C 1.37876 * 120.00170 * 179.97438 * 17 16 15 20 20 N 1.31505 * 120.00674 * 180.02562 * 19 17 16 21 21 Si 1.86807 * 119.99618 * 0.02562 * 19 17 16 22 22 H 1.48494 * 109.47370 * 89.99568 * 21 19 17 23 23 H 1.48500 * 109.46665 * 209.99650 * 21 19 17 24 24 H 1.48498 * 109.47197 * 329.99422 * 21 19 17 25 25 H 1.09004 * 109.47036 * 300.00122 * 1 2 3 26 26 H 1.08998 * 109.46933 * 60.00174 * 1 2 3 27 27 H 1.08994 * 109.46690 * 180.02562 * 1 2 3 28 28 H 1.07994 * 120.01263 * 359.97438 * 6 5 4 29 29 H 1.08004 * 119.95372 * 179.97438 * 7 6 5 30 30 H 1.07995 * 119.95011 * 180.02562 * 8 7 6 31 31 H 0.96998 * 119.99818 * 0.02562 * 15 13 2 32 32 H 1.08993 * 109.46961 * 299.99702 * 16 15 13 33 33 H 1.08996 * 109.46991 * 60.00306 * 16 15 13 34 34 H 0.96993 * 120.00720 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 8 2.0064 -0.6736 1.1668 5 6 2.1125 0.0627 2.3044 6 6 1.6592 1.3736 2.3282 7 6 1.7682 2.1209 3.4851 8 6 2.3281 1.5638 4.6199 9 6 2.7805 0.2563 4.6005 10 17 3.4836 -0.4398 6.0269 11 6 2.6781 -0.4944 3.4427 12 17 3.2520 -2.1325 3.4155 13 6 2.0324 -0.7103 -1.2304 14 8 2.6531 -1.7466 -1.1214 15 7 1.7919 -0.1942 -2.4519 16 6 2.2798 -0.8850 -3.6482 17 6 1.8806 -0.1070 -4.8755 18 1 1.3200 0.8106 -4.7746 19 6 2.2321 -0.5660 -6.1273 20 7 1.8842 0.1131 -7.1983 21 14 3.2024 -2.1527 -6.3017 22 1 2.2633 -3.2970 -6.4183 23 1 4.0509 -2.0827 -7.5185 24 1 4.0645 -2.3396 -5.1072 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3632 -1.0276 0.0005 28 1 1.2220 1.8102 1.4425 29 1 1.4156 3.1415 3.5031 30 1 2.4119 2.1499 5.5232 31 1 1.2958 0.6348 -2.5391 32 1 3.3660 -0.9636 -3.6047 33 1 1.8448 -1.8834 -3.6939 34 1 2.1311 -0.2099 -8.0789 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000427607241.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:47:37 Heat of formation + Delta-G solvation = -61.714947 kcal Electronic energy + Delta-G solvation = -21201.695560 eV Core-core repulsion = 17572.876710 eV Total energy + Delta-G solvation = -3628.818850 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.84268 -39.18995 -37.80010 -36.63520 -36.54496 -34.45039 -32.78614 -32.00976 -30.86414 -30.07252 -27.97171 -24.89372 -23.39555 -22.94967 -21.74145 -19.99462 -18.84563 -17.78792 -16.78246 -16.61360 -16.05887 -15.86769 -15.48910 -15.05029 -14.70828 -14.49627 -14.31572 -13.75609 -13.63509 -13.23759 -12.71723 -12.53457 -12.40978 -12.39991 -12.12687 -12.00132 -11.71712 -11.47235 -11.38391 -11.14479 -11.07681 -10.89921 -10.81606 -10.02594 -9.58004 -9.34582 -9.09378 -8.85074 -8.56070 -8.30619 -6.27727 -4.30971 0.56324 0.82487 1.51555 2.02882 2.63982 2.96402 3.09831 3.23411 3.30569 3.38642 3.85254 4.28262 4.37390 4.44328 4.51539 4.69994 4.77522 4.83576 4.96042 5.04352 5.07916 5.40758 5.44311 5.53947 5.64115 5.84255 5.93537 6.02774 6.68751 6.91732 6.97696 7.08094 7.28138 8.00702 8.36633 8.64028 8.75609 9.31601 10.83950 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.026825 B = 0.002849 C = 0.002656 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1043.563279 B = 9827.127602 C =10538.137823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.063 3.937 3 H 0.099 0.901 4 O -0.267 6.267 5 C 0.159 3.841 6 C -0.200 4.200 7 C -0.061 4.061 8 C -0.143 4.143 9 C 0.006 3.994 10 Cl -0.045 7.045 11 C -0.070 4.070 12 Cl -0.031 7.031 13 C 0.505 3.495 14 O -0.529 6.529 15 N -0.698 5.698 16 C 0.222 3.778 17 C -0.546 4.546 18 H 0.080 0.920 19 C 0.079 3.921 20 N -0.891 5.891 21 Si 0.875 3.125 22 H -0.272 1.272 23 H -0.283 1.283 24 H -0.260 1.260 25 H 0.072 0.928 26 H 0.086 0.914 27 H 0.077 0.923 28 H 0.147 0.853 29 H 0.142 0.858 30 H 0.142 0.858 31 H 0.397 0.603 32 H 0.028 0.972 33 H 0.023 0.977 34 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.042 5.371 24.752 25.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.003 3.997 3 H 0.116 0.884 4 O -0.178 6.178 5 C 0.111 3.889 6 C -0.219 4.219 7 C -0.079 4.079 8 C -0.162 4.162 9 C -0.022 4.022 10 Cl -0.016 7.016 11 C -0.099 4.099 12 Cl -0.001 7.001 13 C 0.287 3.713 14 O -0.406 6.406 15 N -0.349 5.349 16 C 0.100 3.900 17 C -0.584 4.584 18 H 0.098 0.902 19 C -0.125 4.125 20 N -0.527 5.527 21 Si 0.702 3.298 22 H -0.198 1.198 23 H -0.208 1.208 24 H -0.184 1.184 25 H 0.090 0.910 26 H 0.105 0.895 27 H 0.096 0.904 28 H 0.165 0.835 29 H 0.160 0.840 30 H 0.160 0.840 31 H 0.231 0.769 32 H 0.045 0.955 33 H 0.041 0.959 34 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -1.409 4.179 24.665 25.056 hybrid contribution 0.248 -0.340 -0.272 0.501 sum -1.161 3.839 24.393 24.720 Atomic orbital electron populations 1.22344 0.92350 1.04785 1.03858 1.22449 0.96003 0.97164 0.84085 0.88357 1.86340 1.80017 1.36178 1.15247 1.18582 0.93732 0.90249 0.86378 1.21464 1.06171 0.93284 1.00972 1.20996 0.95788 0.99950 0.91201 1.20932 1.02103 0.92889 1.00300 1.20502 1.00295 0.93827 0.87573 1.98395 1.82141 1.84417 1.36607 1.19945 1.07216 0.89798 0.92893 1.98408 1.86951 1.16208 1.98571 1.19851 0.81233 0.86001 0.84183 1.90725 1.40200 1.23268 1.86362 1.46074 1.56087 1.27313 1.05386 1.19557 0.95194 0.93286 0.81933 1.21042 1.37924 1.10485 0.88919 0.90159 1.24775 0.95083 0.97188 0.95435 1.69862 1.45628 1.39013 0.98244 0.86836 0.80870 0.83679 0.78458 1.19760 1.20814 1.18448 0.90952 0.89541 0.90413 0.83541 0.84015 0.83973 0.76896 0.95451 0.95874 0.92155 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.82 9.13 37.16 0.34 -1.48 16 2 C 0.06 0.83 2.63 -27.89 -0.07 0.76 16 3 H 0.10 1.02 6.31 -51.92 -0.33 0.69 16 4 O -0.27 -4.00 8.80 -39.38 -0.35 -4.34 16 5 C 0.16 1.97 6.59 -39.20 -0.26 1.71 16 6 C -0.20 -1.81 8.24 -39.43 -0.33 -2.14 16 7 C -0.06 -0.44 10.04 -39.60 -0.40 -0.84 16 8 C -0.14 -1.14 9.83 -39.53 -0.39 -1.53 16 9 C 0.01 0.06 6.32 -39.49 -0.25 -0.19 16 10 Cl -0.04 -0.44 27.96 -51.86 -1.45 -1.89 16 11 C -0.07 -0.88 6.34 -39.33 -0.25 -1.13 16 12 Cl -0.03 -0.42 27.51 -51.86 -1.43 -1.85 16 13 C 0.50 9.33 7.18 -10.99 -0.08 9.25 16 14 O -0.53 -12.24 16.51 -14.31 -0.24 -12.48 16 15 N -0.70 -13.24 5.51 -61.48 -0.34 -13.58 16 16 C 0.22 5.26 4.50 -5.19 -0.02 5.24 16 17 C -0.55 -14.43 9.83 -34.44 -0.34 -14.76 16 18 H 0.08 2.18 7.84 -52.48 -0.41 1.77 16 19 C 0.08 2.19 5.47 -17.82 -0.10 2.09 16 20 N -0.89 -25.82 13.96 55.43 0.77 -25.05 16 21 Si 0.88 21.04 27.47 -169.99 -4.67 16.37 16 22 H -0.27 -6.46 7.11 56.52 0.40 -6.06 16 23 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 24 H -0.26 -6.24 6.54 56.52 0.37 -5.87 16 25 H 0.07 0.58 6.91 -51.93 -0.36 0.23 16 26 H 0.09 0.78 7.92 -51.93 -0.41 0.37 16 27 H 0.08 0.91 8.14 -51.93 -0.42 0.49 16 28 H 0.15 1.03 5.43 -52.49 -0.28 0.75 16 29 H 0.14 0.58 8.06 -52.48 -0.42 0.16 16 30 H 0.14 0.80 8.06 -52.49 -0.42 0.38 16 31 H 0.40 6.32 8.10 -40.82 -0.33 5.99 16 32 H 0.03 0.69 7.20 -51.93 -0.37 0.32 16 33 H 0.02 0.58 7.57 -51.93 -0.39 0.18 16 34 H 0.27 7.30 8.31 -40.82 -0.34 6.96 16 LS Contribution 324.41 15.07 4.89 4.89 Total: -1.00 -32.59 324.41 -8.27 -40.87 By element: Atomic # 1 Polarization: 3.41 SS G_CDS: -3.33 Total: 0.08 kcal Atomic # 6 Polarization: -0.88 SS G_CDS: -2.14 Total: -3.02 kcal Atomic # 7 Polarization: -39.06 SS G_CDS: 0.43 Total: -38.63 kcal Atomic # 8 Polarization: -16.24 SS G_CDS: -0.58 Total: -16.82 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -4.67 Total: 16.37 kcal Atomic # 17 Polarization: -0.86 SS G_CDS: -2.88 Total: -3.74 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -32.59 -8.27 -40.87 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000427607241.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.848 kcal (2) G-P(sol) polarization free energy of solvation -32.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.867 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.715 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds