Wall clock time and date at job start Tue Mar 31 2020 11:55:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.34766 * 120.00298 * 2 1 4 4 O 1.21690 * 120.00051 * 179.97438 * 3 2 1 5 5 C 1.46375 * 119.99998 * 359.97438 * 3 2 1 6 6 H 1.08002 * 119.99766 * 359.97438 * 5 3 2 7 7 C 1.40057 * 120.00152 * 179.97438 * 5 3 2 8 8 N 1.30671 * 119.99510 * 0.02562 * 7 5 3 9 9 Si 1.86798 * 120.00131 * 179.97438 * 7 5 3 10 10 H 1.48494 * 109.46829 * 60.00062 * 9 7 5 11 11 H 1.48496 * 109.47046 * 180.02562 * 9 7 5 12 12 H 1.48500 * 109.47267 * 300.00376 * 9 7 5 13 13 C 1.46506 * 119.99777 * 179.97438 * 2 1 3 14 14 H 1.08990 * 109.47128 * 174.12716 * 13 2 1 15 15 C 1.52992 * 109.47256 * 294.13218 * 13 2 1 16 16 O 1.42907 * 109.47597 * 64.99618 * 15 13 2 17 17 C 1.50703 * 109.46913 * 54.12777 * 13 2 1 18 18 C 1.38247 * 120.00356 * 228.44913 * 17 13 2 19 19 C 1.38216 * 120.03974 * 179.77431 * 18 17 13 20 20 C 1.38248 * 120.03833 * 0.50114 * 19 18 17 21 21 C 1.38298 * 120.00014 * 359.75049 * 20 19 18 22 22 Cl 1.73603 * 120.02039 * 179.97438 * 21 20 19 23 23 C 1.38303 * 119.99863 * 48.72620 * 17 13 2 24 24 Cl 1.73603 * 120.02037 * 359.97438 * 23 17 13 25 25 H 1.08997 * 109.47586 * 275.31898 * 1 2 3 26 26 H 1.09007 * 109.47176 * 35.31771 * 1 2 3 27 27 H 1.08999 * 109.47268 * 155.31559 * 1 2 3 28 28 H 0.97003 * 119.99491 * 179.97438 * 8 7 5 29 29 H 1.08999 * 109.47398 * 184.99944 * 15 13 2 30 30 H 1.09001 * 109.47005 * 304.99684 * 15 13 2 31 31 H 0.96700 * 114.00272 * 179.97438 * 16 15 13 32 32 H 1.08006 * 119.97685 * 0.02562 * 18 17 13 33 33 H 1.08002 * 119.98430 * 180.22901 * 19 18 17 34 34 H 1.08002 * 120.00037 * 179.72447 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 3.3558 1.1670 0.0005 5 6 1.4071 2.4348 -0.0006 6 1 0.3270 2.4348 -0.0014 7 6 2.1074 3.6477 0.0000 8 7 3.4141 3.6475 0.0005 9 14 1.1735 5.2654 -0.0015 10 1 0.3184 5.3443 1.2100 11 1 2.1385 6.3941 -0.0012 12 1 0.3211 5.3439 -1.2149 13 6 2.1975 -1.2688 0.0006 14 1 3.2643 -1.0724 -0.1047 15 6 1.9417 -2.0047 1.3173 16 8 0.5614 -2.3650 1.4014 17 6 1.7275 -2.1206 -1.1504 18 6 1.3918 -3.4448 -0.9385 19 6 0.9563 -4.2255 -1.9927 20 6 0.8657 -3.6858 -3.2622 21 6 1.2061 -2.3627 -3.4771 22 17 1.0932 -1.6846 -5.0712 23 6 1.6375 -1.5791 -2.4198 24 17 2.0652 0.0820 -2.6878 25 1 -0.3634 0.0953 1.0232 26 1 -0.3634 0.8386 -0.5941 27 1 -0.3634 -0.9337 -0.4292 28 1 3.8991 4.4876 0.0005 29 1 2.5551 -2.9049 1.3555 30 1 2.1990 -1.3541 2.1531 31 1 0.3266 -2.8365 2.2124 32 1 1.4661 -3.8685 0.0522 33 1 0.6907 -5.2589 -1.8254 34 1 0.5296 -4.2975 -4.0864 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000598190865.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:39 Heat of formation + Delta-G solvation = -57.652964 kcal Electronic energy + Delta-G solvation = -22915.458125 eV Core-core repulsion = 19286.815416 eV Total energy + Delta-G solvation = -3628.642709 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -39.79267 -37.76356 -36.50563 -36.16280 -35.75185 -33.89375 -32.39289 -31.45235 -30.34920 -28.37423 -26.06951 -25.21410 -23.52620 -22.35585 -20.92932 -18.94304 -17.48826 -17.05377 -16.25473 -15.79801 -15.47997 -15.41733 -14.89949 -14.32960 -13.99760 -13.89527 -13.67568 -13.12609 -12.88045 -12.53180 -12.03028 -11.85275 -11.55428 -11.43575 -11.31908 -11.13881 -11.11528 -10.96153 -10.92873 -10.84909 -10.64296 -10.24309 -10.11442 -9.92403 -9.76643 -8.80389 -8.60136 -8.37471 -7.51929 -7.13989 -6.15511 -4.58959 1.20889 1.27632 2.15934 2.77527 3.17585 3.22616 3.24254 3.63057 4.12454 4.44137 4.59338 4.67763 4.74206 4.99782 5.22339 5.27530 5.38956 5.58822 5.63828 5.70504 5.88534 5.98920 6.16248 6.25757 6.34070 6.40344 6.50989 6.67764 6.79241 6.79628 7.49022 7.67096 7.81139 8.18965 8.41169 9.07150 9.48206 10.61670 10.81058 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.015385 B = 0.005899 C = 0.004738 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1819.458664 B = 4745.633339 C = 5908.263436 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.120 3.880 2 N -0.629 5.629 3 C 0.566 3.434 4 O -0.576 6.576 5 C -0.537 4.537 6 H 0.070 0.930 7 C 0.089 3.911 8 N -0.767 5.767 9 Si 0.901 3.099 10 H -0.268 1.268 11 H -0.281 1.281 12 H -0.268 1.268 13 C 0.187 3.813 14 H 0.120 0.880 15 C 0.069 3.931 16 O -0.560 6.560 17 C -0.061 4.061 18 C -0.085 4.085 19 C -0.118 4.118 20 C -0.110 4.110 21 C -0.040 4.040 22 Cl -0.062 7.062 23 C -0.023 4.023 24 Cl -0.004 7.004 25 H 0.032 0.968 26 H 0.057 0.943 27 H 0.044 0.956 28 H 0.267 0.733 29 H 0.045 0.955 30 H 0.055 0.945 31 H 0.368 0.632 32 H 0.138 0.862 33 H 0.130 0.870 34 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.766 -14.880 -2.306 16.124 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.025 4.025 2 N -0.366 5.366 3 C 0.373 3.627 4 O -0.458 6.458 5 C -0.573 4.573 6 H 0.088 0.912 7 C -0.131 4.131 8 N -0.396 5.396 9 Si 0.726 3.274 10 H -0.193 1.193 11 H -0.206 1.206 12 H -0.193 1.193 13 C 0.081 3.919 14 H 0.137 0.863 15 C -0.010 4.010 16 O -0.364 6.364 17 C -0.063 4.063 18 C -0.104 4.104 19 C -0.136 4.136 20 C -0.129 4.129 21 C -0.068 4.068 22 Cl -0.033 7.033 23 C -0.051 4.051 24 Cl 0.026 6.974 25 H 0.050 0.950 26 H 0.076 0.924 27 H 0.063 0.937 28 H 0.078 0.922 29 H 0.063 0.937 30 H 0.073 0.927 31 H 0.213 0.787 32 H 0.155 0.845 33 H 0.148 0.852 34 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -4.895 -14.199 -3.062 15.328 hybrid contribution -0.611 0.657 0.351 0.963 sum -5.506 -13.543 -2.710 14.868 Atomic orbital electron populations 1.21195 0.81570 1.00066 0.99622 1.47907 1.05346 1.03509 1.79872 1.18110 0.86867 0.81997 0.75741 1.90582 1.13960 1.85919 1.55387 1.20921 0.93636 0.89088 1.53686 0.91222 1.25696 0.94564 1.00102 0.92721 1.70009 1.06918 1.27187 1.35493 0.86535 0.79956 0.81435 0.79493 1.19281 1.20629 1.19310 1.19616 0.99318 0.84483 0.88473 0.86292 1.22632 0.82329 0.97253 0.98781 1.86649 1.26109 1.79274 1.44380 1.20210 0.98254 0.94539 0.93299 1.21207 0.97169 0.92588 0.99427 1.21077 1.00478 1.00097 0.91992 1.20905 1.01173 0.92652 0.98201 1.20774 1.05701 0.94119 0.86161 1.98364 1.96723 1.85397 1.22847 1.20919 1.01657 0.89425 0.93123 1.98510 1.90339 1.12213 1.96363 0.94974 0.92417 0.93709 0.92209 0.93740 0.92685 0.78674 0.84464 0.85188 0.84915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 2.38 8.20 59.85 0.49 2.87 16 2 N -0.63 -13.85 1.42 -176.93 -0.25 -14.11 16 3 C 0.57 15.37 5.49 -12.99 -0.07 15.30 16 4 O -0.58 -17.60 14.30 5.20 0.07 -17.53 16 5 C -0.54 -14.87 8.73 -35.63 -0.31 -15.19 16 6 H 0.07 1.82 6.11 -52.49 -0.32 1.49 16 7 C 0.09 2.45 5.50 -17.36 -0.10 2.36 16 8 N -0.77 -22.67 11.83 55.55 0.66 -22.02 16 9 Si 0.90 20.32 29.56 -169.99 -5.02 15.29 16 10 H -0.27 -5.88 7.11 56.52 0.40 -5.48 16 11 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 12 H -0.27 -5.95 7.11 56.52 0.40 -5.55 16 13 C 0.19 3.52 2.48 -69.08 -0.17 3.34 16 14 H 0.12 2.56 6.92 -51.93 -0.36 2.20 16 15 C 0.07 1.01 6.02 37.15 0.22 1.23 16 16 O -0.56 -7.19 9.65 -35.23 -0.34 -7.53 16 17 C -0.06 -1.02 4.06 -104.59 -0.42 -1.44 16 18 C -0.09 -1.13 8.40 -39.59 -0.33 -1.46 16 19 C -0.12 -1.36 10.04 -39.59 -0.40 -1.75 16 20 C -0.11 -1.38 9.83 -39.56 -0.39 -1.77 16 21 C -0.04 -0.62 6.32 -39.47 -0.25 -0.87 16 22 Cl -0.06 -0.93 27.96 -51.86 -1.45 -2.38 16 23 C -0.02 -0.41 6.11 -39.46 -0.24 -0.65 16 24 Cl 0.00 -0.09 23.68 -51.86 -1.23 -1.31 16 25 H 0.03 0.62 8.11 -51.93 -0.42 0.20 16 26 H 0.06 1.21 6.41 -51.92 -0.33 0.87 16 27 H 0.04 0.83 6.60 -51.93 -0.34 0.48 16 28 H 0.27 7.26 8.29 -40.82 -0.34 6.92 16 29 H 0.04 0.52 7.32 -51.93 -0.38 0.14 16 30 H 0.05 0.88 8.14 -51.93 -0.42 0.46 16 31 H 0.37 2.97 9.12 45.56 0.42 3.38 16 32 H 0.14 1.54 5.50 -52.48 -0.29 1.25 16 33 H 0.13 1.07 8.06 -52.49 -0.42 0.65 16 34 H 0.13 1.33 8.06 -52.49 -0.42 0.90 16 LS Contribution 309.55 15.07 4.66 4.66 Total: -1.00 -33.54 309.55 -7.30 -40.84 By element: Atomic # 1 Polarization: 4.55 SS G_CDS: -2.43 Total: 2.12 kcal Atomic # 6 Polarization: 3.93 SS G_CDS: -1.97 Total: 1.96 kcal Atomic # 7 Polarization: -36.53 SS G_CDS: 0.41 Total: -36.12 kcal Atomic # 8 Polarization: -24.80 SS G_CDS: -0.27 Total: -25.06 kcal Atomic # 14 Polarization: 20.32 SS G_CDS: -5.02 Total: 15.29 kcal Atomic # 17 Polarization: -1.02 SS G_CDS: -2.68 Total: -3.69 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -33.54 -7.30 -40.84 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000598190865.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.812 kcal (2) G-P(sol) polarization free energy of solvation -33.542 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.353 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.841 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds