Wall clock time and date at job start Tue Mar 31 2020 11:58:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31252 * 1 3 3 Si 1.86804 * 119.99612 * 2 1 4 4 H 1.48500 * 109.46983 * 269.99620 * 3 2 1 5 5 H 1.48499 * 109.47436 * 29.99801 * 3 2 1 6 6 H 1.48497 * 109.47209 * 149.99920 * 3 2 1 7 7 C 1.39114 * 120.00375 * 179.97438 * 2 1 3 8 8 H 1.07998 * 120.00119 * 195.55045 * 7 2 1 9 9 N 1.36705 * 119.99716 * 15.55256 * 7 2 1 10 10 C 1.35485 * 118.75379 * 31.82666 * 9 7 2 11 11 C 1.36187 * 122.27604 * 180.27898 * 10 9 7 12 12 C 1.48291 * 120.41570 * 179.70450 * 11 10 9 13 13 N 1.34107 * 126.68323 * 359.69982 * 12 11 10 14 14 N 1.28980 * 107.26524 * 180.02562 * 13 12 11 15 15 N 1.28726 * 108.96275 * 0.02562 * 14 13 12 16 16 H 0.97001 * 125.33614 * 180.26313 * 15 14 13 17 17 N 1.28875 * 109.33477 * 359.97438 * 15 14 13 18 18 C 1.46956 * 119.17289 * 359.43082 * 11 10 9 19 19 O 1.21934 * 121.32247 * 180.22972 * 18 11 10 20 20 C 1.47414 * 117.35287 * 0.25189 * 18 11 10 21 21 C 1.39483 * 121.20739 * 180.02562 * 20 18 11 22 22 C 1.37882 * 119.58300 * 179.97438 * 21 20 18 23 23 Cl 1.73603 * 119.85569 * 179.97438 * 22 21 20 24 24 C 1.38884 * 120.28193 * 0.02562 * 22 21 20 25 25 C 1.37779 * 120.71214 * 359.96805 * 24 22 21 26 26 C 1.37945 * 118.75321 * 211.48778 * 9 7 2 27 27 H 0.97002 * 120.00332 * 0.02562 * 1 2 3 28 28 H 1.08001 * 118.85920 * 359.96353 * 10 9 7 29 29 H 1.07997 * 120.20747 * 359.96652 * 21 20 18 30 30 H 1.08002 * 119.63728 * 179.97438 * 24 22 21 31 31 H 1.08004 * 120.01175 * 180.02562 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3125 0.0000 0.0000 3 14 2.2464 1.6178 0.0000 4 1 2.4940 2.0465 -1.4001 5 1 1.4438 2.6528 0.7000 6 1 3.5440 1.4404 0.7000 7 6 2.0082 -1.2047 0.0005 8 1 3.0585 -1.2217 0.2513 9 7 1.3622 -2.3671 -0.3164 10 6 0.3417 -2.3238 -1.2065 11 6 -0.3544 -3.4366 -1.5695 12 6 -1.4689 -3.3407 -2.5430 13 7 -1.9116 -2.2281 -3.1469 14 7 -2.8897 -2.5723 -3.9140 15 7 -3.0733 -3.8424 -3.8134 16 1 -3.7467 -4.3515 -4.2912 17 7 -2.2183 -4.3327 -2.9830 18 6 0.0165 -4.7347 -0.9889 19 8 -0.5774 -5.7564 -1.2893 20 6 1.1348 -4.7524 -0.0286 21 6 1.5542 -5.9402 0.5704 22 6 2.6043 -5.9182 1.4637 23 17 3.1318 -7.3923 2.2138 24 6 3.2412 -4.7217 1.7667 25 6 2.8367 -3.5416 1.1819 26 6 1.7788 -3.5407 0.2768 27 1 -0.4851 0.8400 -0.0004 28 1 0.0675 -1.3730 -1.6393 29 1 1.0596 -6.8711 0.3361 30 1 4.0623 -4.7165 2.4682 31 1 3.3402 -2.6177 1.4254 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000737704722.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:58:18 Heat of formation + Delta-G solvation = 125.241615 kcal Electronic energy + Delta-G solvation = -23198.094241 eV Core-core repulsion = 19508.567694 eV Total energy + Delta-G solvation = -3689.526547 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 317.042 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -43.63038 -40.40792 -37.40829 -37.26224 -35.83254 -33.83779 -33.18078 -32.61643 -31.26793 -29.86549 -29.20628 -25.66952 -24.24868 -23.90549 -23.04053 -21.70389 -21.26128 -18.78924 -18.37145 -17.81208 -17.05571 -16.37506 -15.94948 -15.40373 -14.71555 -14.40464 -14.28668 -14.16267 -13.84017 -13.43754 -13.15434 -12.76005 -12.69996 -12.42479 -12.09092 -11.87336 -11.50699 -11.47898 -11.22183 -10.98938 -10.86328 -10.72678 -10.58279 -10.49389 -10.28551 -10.16834 -9.38409 -8.68875 -8.65952 -8.22306 -7.29782 -6.95060 -4.77867 1.22824 1.33073 1.80662 2.44509 2.48779 2.85533 2.88818 2.93085 2.94888 3.02626 3.51514 3.71946 4.03355 4.26204 4.48638 4.77200 4.91548 5.17363 5.20706 5.45254 5.67680 5.76117 5.97109 6.19278 6.26914 6.32385 6.40580 6.49676 6.58372 6.69044 6.79395 7.00912 7.05694 7.09210 7.34399 7.97112 8.38680 8.58413 8.78760 8.94099 9.90206 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.009074 B = 0.006413 C = 0.003808 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3085.035716 B = 4364.766812 C = 7350.244381 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.830 5.830 2 C 0.054 3.946 3 Si 0.942 3.058 4 H -0.265 1.265 5 H -0.275 1.275 6 H -0.262 1.262 7 C -0.381 4.381 8 H 0.120 0.880 9 N -0.292 5.292 10 C 0.248 3.752 11 C -0.285 4.285 12 C 0.277 3.723 13 N -0.283 5.283 14 N -0.074 5.074 15 N -0.248 5.248 16 H 0.466 0.534 17 N -0.292 5.292 18 C 0.425 3.575 19 O -0.508 6.508 20 C -0.191 4.191 21 C -0.022 4.022 22 C -0.094 4.094 23 Cl -0.089 7.089 24 C -0.068 4.068 25 C -0.138 4.138 26 C 0.177 3.823 27 H 0.292 0.708 28 H 0.178 0.822 29 H 0.139 0.861 30 H 0.131 0.869 31 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.949 -2.780 0.050 4.053 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.459 5.459 2 C -0.160 4.160 3 Si 0.765 3.235 4 H -0.190 1.190 5 H -0.200 1.200 6 H -0.186 1.186 7 C -0.507 4.507 8 H 0.137 0.863 9 N 0.040 4.960 10 C 0.106 3.894 11 C -0.297 4.297 12 C 0.000 4.000 13 N -0.158 5.158 14 N -0.069 5.069 15 N -0.092 5.092 16 H 0.318 0.682 17 N -0.144 5.144 18 C 0.313 3.687 19 O -0.391 6.391 20 C -0.196 4.196 21 C -0.041 4.041 22 C -0.121 4.121 23 Cl -0.060 7.060 24 C -0.088 4.088 25 C -0.158 4.158 26 C 0.070 3.930 27 H 0.103 0.897 28 H 0.195 0.805 29 H 0.157 0.843 30 H 0.149 0.851 31 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 2.200 -2.807 -0.356 3.584 hybrid contribution 0.103 0.227 0.239 0.345 sum 2.303 -2.580 -0.117 3.461 Atomic orbital electron populations 1.69745 1.06500 1.30588 1.39110 1.25677 0.95657 1.01158 0.93464 0.85670 0.79372 0.78893 0.79542 1.18999 1.19981 1.18585 1.20003 0.96062 0.82075 1.52577 0.86259 1.39364 1.23863 1.05799 1.26930 1.21847 0.84446 0.99248 0.83815 1.18396 1.04471 0.95079 1.11719 1.22902 0.96104 0.83965 0.97049 1.76078 1.06485 1.24815 1.08413 1.78709 1.13563 0.96787 1.17877 1.47733 1.25680 1.05899 1.29929 0.68197 1.75323 1.04696 1.25476 1.08882 1.19113 0.81849 0.87732 0.80025 1.90635 1.53048 1.35623 1.59840 1.20059 1.02077 0.92186 1.05309 1.20768 0.93149 0.97947 0.92250 1.20530 1.01371 0.87226 1.02991 1.98316 1.90210 1.35780 1.81735 1.20837 0.98892 0.90250 0.98831 1.20808 0.97944 0.98593 0.98447 1.18426 0.95099 0.86392 0.93047 0.89657 0.80519 0.84320 0.85110 0.83604 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.83 -18.86 11.21 55.50 0.62 -18.24 16 2 C 0.05 1.13 4.96 -17.47 -0.09 1.04 16 3 Si 0.94 16.20 29.58 -169.99 -5.03 11.17 16 4 H -0.27 -4.59 7.11 56.52 0.40 -4.19 16 5 H -0.27 -4.80 7.11 56.52 0.40 -4.40 16 6 H -0.26 -4.33 7.11 56.52 0.40 -3.93 16 7 C -0.38 -8.00 8.60 -15.05 -0.13 -8.13 16 8 H 0.12 2.27 6.42 -52.49 -0.34 1.93 16 9 N -0.29 -6.36 2.79 -59.71 -0.17 -6.53 16 10 C 0.25 5.62 8.60 -16.68 -0.14 5.47 16 11 C -0.28 -6.53 6.02 -102.97 -0.62 -7.15 16 12 C 0.28 6.16 7.94 -156.27 -1.24 4.92 16 13 N -0.28 -6.02 12.16 32.14 0.39 -5.63 16 14 N -0.07 -1.34 13.47 60.35 0.81 -0.53 16 15 N -0.25 -3.94 7.90 60.35 0.48 -3.47 16 16 H 0.47 4.77 8.96 -340.35 -3.05 1.72 16 17 N -0.29 -5.95 11.30 32.15 0.36 -5.59 16 18 C 0.42 9.77 7.14 -32.32 -0.23 9.54 16 19 O -0.51 -12.39 16.15 4.98 0.08 -12.31 16 20 C -0.19 -3.97 5.89 -104.82 -0.62 -4.59 16 21 C -0.02 -0.40 9.43 -39.25 -0.37 -0.77 16 22 C -0.09 -1.52 6.32 -39.47 -0.25 -1.77 16 23 Cl -0.09 -1.26 28.95 -51.86 -1.50 -2.76 16 24 C -0.07 -1.04 9.79 -39.51 -0.39 -1.42 16 25 C -0.14 -2.36 9.21 -39.38 -0.36 -2.72 16 26 C 0.18 3.59 6.50 -83.87 -0.55 3.04 16 27 H 0.29 6.22 8.31 -40.82 -0.34 5.88 16 28 H 0.18 4.13 5.90 -52.49 -0.31 3.82 16 29 H 0.14 2.49 7.78 -52.49 -0.41 2.08 16 30 H 0.13 1.60 8.06 -52.49 -0.42 1.18 16 31 H 0.15 2.29 6.26 -52.48 -0.33 1.96 16 LS Contribution 296.91 15.07 4.47 4.47 Total: -1.00 -27.43 296.91 -8.45 -35.88 By element: Atomic # 1 Polarization: 10.05 SS G_CDS: -3.99 Total: 6.05 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: -4.98 Total: -2.53 kcal Atomic # 7 Polarization: -42.48 SS G_CDS: 2.50 Total: -39.98 kcal Atomic # 8 Polarization: -12.39 SS G_CDS: 0.08 Total: -12.31 kcal Atomic # 14 Polarization: 16.20 SS G_CDS: -5.03 Total: 11.17 kcal Atomic # 17 Polarization: -1.26 SS G_CDS: -1.50 Total: -2.76 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -27.43 -8.45 -35.88 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000737704722.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 161.125 kcal (2) G-P(sol) polarization free energy of solvation -27.435 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 133.691 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.884 kcal (6) G-S(sol) free energy of system = (1) + (5) 125.242 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds