Wall clock time and date at job start Tue Mar 31 2020 12:16:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39757 * 125.83551 * 2 1 4 4 C 1.36116 * 107.82596 * 179.97438 * 3 2 1 5 5 N 1.39474 * 126.21325 * 179.97438 * 4 3 2 6 6 C 1.34777 * 120.00246 * 0.03591 * 5 4 3 7 7 O 1.21293 * 119.99756 * 359.97438 * 6 5 4 8 8 C 1.50702 * 119.99928 * 180.27323 * 6 5 4 9 9 H 1.09000 * 115.54468 * 325.38900 * 8 6 5 10 10 C 1.52990 * 117.49806 * 179.72210 * 8 6 5 11 11 C 1.52994 * 60.00136 * 252.50889 * 10 8 6 12 12 Cl 1.80299 * 117.49989 * 252.50893 * 11 10 8 13 13 Cl 1.80299 * 117.50063 * 107.49085 * 11 10 8 14 14 N 1.35260 * 107.56777 * 0.26765 * 4 3 2 15 15 C 1.46492 * 126.04676 * 179.69683 * 14 4 3 16 16 C 1.50696 * 109.47273 * 89.99676 * 15 14 4 17 17 H 1.08001 * 120.00025 * 0.02562 * 16 15 14 18 18 C 1.37886 * 120.00359 * 179.97438 * 16 15 14 19 19 N 1.31513 * 119.99582 * 0.02562 * 18 16 15 20 20 Si 1.86793 * 120.00085 * 179.97438 * 18 16 15 21 21 H 1.48505 * 109.47071 * 90.00142 * 20 18 16 22 22 H 1.48499 * 109.47087 * 209.99826 * 20 18 16 23 23 H 1.48498 * 109.47631 * 329.99869 * 20 18 16 24 24 N 1.30850 * 125.83985 * 179.97438 * 2 1 3 25 25 H 1.09000 * 109.47273 * 89.99894 * 1 2 3 26 26 H 1.09004 * 109.47532 * 209.99740 * 1 2 3 27 27 H 1.08999 * 109.47708 * 330.00199 * 1 2 3 28 28 H 1.07994 * 126.08988 * 359.94373 * 3 2 1 29 29 H 0.97000 * 119.99436 * 180.02562 * 5 4 3 30 30 H 1.09005 * 117.50291 * 359.97438 * 10 8 6 31 31 H 1.08996 * 117.50251 * 145.01750 * 10 8 6 32 32 H 1.08999 * 109.47016 * 209.99948 * 15 14 4 33 33 H 1.09003 * 109.47379 * 329.99844 * 15 14 4 34 34 H 0.96999 * 119.99855 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3252 1.1330 0.0000 4 6 3.6197 0.7122 0.0006 5 7 4.7512 1.5276 0.0003 6 6 4.6156 2.8685 0.0001 7 8 3.5095 3.3662 -0.0003 8 6 5.8383 3.7495 -0.0065 9 1 6.6955 3.3679 0.5482 10 6 5.6180 5.2635 -0.0130 11 6 6.1196 4.5580 -1.2745 12 17 7.8443 4.8069 -1.7376 13 17 4.9631 4.3839 -2.6467 14 7 3.6092 -0.6404 -0.0051 15 6 4.7870 -1.5115 -0.0129 16 6 5.1959 -1.8161 1.4052 17 1 4.6343 -1.4026 2.2298 18 6 6.2863 -2.6237 1.6500 19 7 6.9699 -3.1277 0.6458 20 14 6.7935 -3.0007 3.4078 21 1 6.0948 -4.2259 3.8726 22 1 8.2616 -3.2168 3.4638 23 1 6.4274 -1.8594 4.2844 24 7 2.2731 -1.0607 0.0005 25 1 -0.3634 0.0000 -1.0277 26 1 -0.3634 -0.8900 0.5138 27 1 -0.3634 0.8900 0.5138 28 1 1.9901 2.1597 -0.0009 29 1 5.6358 1.1295 0.0004 30 1 4.5888 5.6224 -0.0130 31 1 6.3306 5.8781 0.5370 32 1 4.5481 -2.4409 -0.5298 33 1 5.6066 -1.0099 -0.5275 34 1 7.7372 -3.6955 0.8180 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000743870088.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:16:46 Heat of formation + Delta-G solvation = 56.732433 kcal Electronic energy + Delta-G solvation = -21674.859961 eV Core-core repulsion = 18083.470126 eV Total energy + Delta-G solvation = -3591.389835 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.044 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.00155 -39.71125 -37.49921 -36.31291 -35.43507 -34.79857 -33.80348 -32.10147 -29.26349 -28.46265 -26.08381 -25.02066 -22.85673 -22.63801 -21.05710 -19.79340 -19.36754 -17.64870 -16.98273 -16.60026 -16.01365 -15.62596 -15.02001 -14.71577 -14.24877 -14.02463 -13.73527 -13.23113 -12.90481 -12.80255 -12.56817 -12.53589 -12.31865 -12.05507 -11.81721 -11.60376 -11.48153 -11.16782 -11.10183 -10.93543 -10.91931 -10.45601 -10.38087 -10.29857 -9.98599 -9.84327 -9.59739 -8.74751 -7.96112 -7.49810 -6.35983 -4.44773 0.79136 1.75965 1.93134 2.64325 2.80550 3.14734 3.16450 3.21947 3.25841 3.53489 3.67926 3.83878 3.96589 4.21813 4.48571 4.80948 4.97372 5.13094 5.33128 5.41665 5.59999 6.00771 6.12274 6.13120 6.20762 6.35972 6.61017 6.80613 7.01007 7.44595 7.52238 7.57769 7.76451 7.81680 8.17258 8.58215 8.67352 9.22966 10.71163 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.010828 B = 0.004702 C = 0.003604 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2585.291972 B = 5953.850864 C = 7767.241527 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 C 0.050 3.950 3 C -0.292 4.292 4 C 0.301 3.699 5 N -0.629 5.629 6 C 0.549 3.451 7 O -0.497 6.497 8 C -0.157 4.157 9 H 0.153 0.847 10 C -0.106 4.106 11 C 0.017 3.983 12 Cl -0.084 7.084 13 Cl -0.071 7.071 14 N -0.342 5.342 15 C 0.256 3.744 16 C -0.541 4.541 17 H 0.065 0.935 18 C 0.067 3.933 19 N -0.889 5.889 20 Si 0.906 3.094 21 H -0.276 1.276 22 H -0.283 1.283 23 H -0.272 1.272 24 N -0.283 5.283 25 H 0.068 0.932 26 H 0.066 0.934 27 H 0.070 0.930 28 H 0.161 0.839 29 H 0.418 0.582 30 H 0.137 0.863 31 H 0.132 0.868 32 H 0.057 0.943 33 H 0.045 0.955 34 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.450 16.674 -2.950 16.939 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C -0.114 4.114 3 C -0.324 4.324 4 C 0.078 3.922 5 N -0.275 5.275 6 C 0.333 3.667 7 O -0.371 6.371 8 C -0.180 4.180 9 H 0.170 0.830 10 C -0.144 4.144 11 C -0.035 4.035 12 Cl -0.057 7.057 13 Cl -0.044 7.044 14 N -0.128 5.128 15 C 0.138 3.862 16 C -0.580 4.580 17 H 0.083 0.917 18 C -0.137 4.137 19 N -0.527 5.527 20 Si 0.733 3.267 21 H -0.202 1.202 22 H -0.208 1.208 23 H -0.197 1.197 24 N -0.108 5.108 25 H 0.086 0.914 26 H 0.085 0.915 27 H 0.089 0.911 28 H 0.179 0.821 29 H 0.255 0.745 30 H 0.155 0.845 31 H 0.150 0.850 32 H 0.075 0.925 33 H 0.062 0.938 34 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -0.835 15.574 -3.165 15.914 hybrid contribution 1.278 0.106 0.771 1.496 sum 0.442 15.680 -2.394 15.868 Atomic orbital electron populations 1.20020 0.87554 1.02464 1.02065 1.22029 0.96536 0.91014 1.01867 1.21250 0.88994 1.00457 1.21682 1.17857 0.87758 0.83376 1.03174 1.42560 1.08614 1.05173 1.71149 1.19038 0.89313 0.81344 0.76971 1.90665 1.25668 1.73654 1.47065 1.23162 1.00606 0.95414 0.98770 0.82976 1.23967 1.05652 0.92119 0.92653 1.26486 0.82718 1.09232 0.85098 1.98768 1.16559 1.96811 1.93570 1.98794 1.59189 1.97772 1.48646 1.49362 1.06578 1.02101 1.54729 1.19638 0.77799 0.89793 0.98964 1.21335 1.13318 1.32020 0.91318 0.91687 1.24939 0.95695 0.94876 0.98155 1.69916 1.19226 1.32577 1.30935 0.86355 0.77656 0.79126 0.83571 1.20176 1.20833 1.19691 1.77372 0.86089 1.21787 1.25585 0.91363 0.91480 0.91125 0.82123 0.74467 0.84539 0.85026 0.92498 0.93773 0.92125 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.91 10.44 36.00 0.38 -0.54 16 2 C 0.05 1.00 7.21 -82.44 -0.59 0.40 16 3 C -0.29 -5.84 9.58 -39.78 -0.38 -6.23 16 4 C 0.30 6.21 7.66 -153.16 -1.17 5.04 16 5 N -0.63 -10.66 5.41 -11.46 -0.06 -10.72 16 6 C 0.55 8.08 6.67 -10.98 -0.07 8.00 16 7 O -0.50 -8.27 13.22 5.55 0.07 -8.20 16 8 C -0.16 -1.64 6.03 -91.78 -0.55 -2.20 16 9 H 0.15 1.27 8.14 -51.93 -0.42 0.85 16 10 C -0.11 -0.87 9.73 -26.74 -0.26 -1.13 16 11 C 0.02 0.17 3.61 -26.74 -0.10 0.08 16 12 Cl -0.08 -0.83 29.29 -51.86 -1.52 -2.34 16 13 Cl -0.07 -0.88 28.18 -51.86 -1.46 -2.35 16 14 N -0.34 -7.93 3.60 -61.58 -0.22 -8.15 16 15 C 0.26 6.33 6.00 -5.20 -0.03 6.29 16 16 C -0.54 -14.35 9.39 -34.44 -0.32 -14.67 16 17 H 0.06 1.79 7.81 -52.49 -0.41 1.38 16 18 C 0.07 1.77 5.46 -17.82 -0.10 1.67 16 19 N -0.89 -24.09 13.29 55.43 0.74 -23.36 16 20 Si 0.91 20.42 29.54 -169.99 -5.02 15.40 16 21 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 22 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 23 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 24 N -0.28 -6.53 12.56 33.65 0.42 -6.11 16 25 H 0.07 0.89 8.14 -51.93 -0.42 0.46 16 26 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 27 H 0.07 0.89 8.14 -51.93 -0.42 0.47 16 28 H 0.16 3.09 5.83 -52.49 -0.31 2.78 16 29 H 0.42 6.61 7.97 -40.82 -0.33 6.29 16 30 H 0.14 1.19 7.67 -51.93 -0.40 0.79 16 31 H 0.13 0.71 8.14 -51.93 -0.42 0.29 16 32 H 0.06 1.52 8.14 -51.93 -0.42 1.10 16 33 H 0.04 1.06 7.50 -51.93 -0.39 0.67 16 34 H 0.27 6.89 8.31 -40.82 -0.34 6.55 16 LS Contribution 332.13 15.07 5.01 5.01 Total: -1.00 -30.56 332.13 -8.76 -39.32 By element: Atomic # 1 Polarization: 8.29 SS G_CDS: -3.50 Total: 4.78 kcal Atomic # 6 Polarization: -0.07 SS G_CDS: -3.21 Total: -3.28 kcal Atomic # 7 Polarization: -49.21 SS G_CDS: 0.88 Total: -48.34 kcal Atomic # 8 Polarization: -8.27 SS G_CDS: 0.07 Total: -8.20 kcal Atomic # 14 Polarization: 20.42 SS G_CDS: -5.02 Total: 15.40 kcal Atomic # 17 Polarization: -1.71 SS G_CDS: -2.98 Total: -4.69 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -30.56 -8.76 -39.32 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000743870088.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.052 kcal (2) G-P(sol) polarization free energy of solvation -30.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.488 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.755 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.319 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds