Wall clock time and date at job start Tue Mar 31 2020 10:58:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.09001 * 109.47204 * 2 1 4 4 C 1.50695 * 109.47319 * 120.00812 * 2 1 3 5 5 O 1.20825 * 120.00224 * 119.99559 * 4 2 1 6 6 O 1.34232 * 119.99727 * 299.99634 * 4 2 1 7 7 C 1.45206 * 116.99878 * 180.02562 * 6 4 2 8 8 C 1.50699 * 109.47021 * 179.97438 * 7 6 4 9 9 O 1.21297 * 119.99980 * 0.02562 * 8 7 6 10 10 N 1.34779 * 120.00033 * 180.02562 * 8 7 6 11 11 C 1.37088 * 120.00081 * 180.02562 * 10 8 7 12 12 H 1.08003 * 119.99914 * 359.97438 * 11 10 8 13 13 C 1.38949 * 120.00230 * 179.97438 * 11 10 8 14 14 N 1.31408 * 120.00498 * 179.97438 * 13 11 10 15 15 Si 1.86805 * 119.99920 * 359.97438 * 13 11 10 16 16 H 1.48497 * 109.47208 * 89.99447 * 15 13 11 17 17 H 1.48495 * 109.46914 * 210.00201 * 15 13 11 18 18 H 1.48500 * 109.46598 * 329.99692 * 15 13 11 19 19 C 1.50703 * 109.46661 * 240.00320 * 2 1 3 20 20 C 1.33354 * 125.18711 * 119.99829 * 19 2 1 21 21 C 1.38474 * 114.92756 * 179.97438 * 20 19 2 22 22 C 1.33490 * 114.88492 * 0.02562 * 21 20 19 23 23 Cl 1.73606 * 125.20729 * 180.02562 * 22 21 20 24 24 S 1.75877 * 125.19105 * 299.69760 * 19 2 1 25 25 H 1.08994 * 109.47049 * 59.99417 * 1 2 3 26 26 H 1.09001 * 109.47204 * 180.02562 * 1 2 3 27 27 H 1.09008 * 109.46661 * 299.99381 * 1 2 3 28 28 H 1.09004 * 109.47122 * 299.99817 * 7 6 4 29 29 H 1.09000 * 109.47070 * 59.99842 * 7 6 4 30 30 H 0.97004 * 119.99472 * 359.97438 * 10 8 7 31 31 H 0.97002 * 120.00283 * 180.02562 * 14 13 11 32 32 H 1.07999 * 122.53348 * 0.02562 * 20 19 2 33 33 H 1.08004 * 122.55561 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0324 -0.7105 1.2303 5 8 2.7270 -1.6929 1.1193 6 8 1.7082 -0.2520 2.4495 7 6 2.2279 -0.9861 3.5895 8 6 1.7639 -0.3290 4.8639 9 8 1.0637 0.6603 4.8161 10 7 2.1270 -0.8406 6.0568 11 6 1.7045 -0.2432 7.2160 12 1 1.0811 0.6377 7.1735 13 6 2.0784 -0.7709 8.4459 14 7 1.6738 -0.1980 9.5571 15 14 3.1561 -2.2950 8.5195 16 1 4.5848 -1.8905 8.5383 17 1 2.8429 -3.0636 9.7509 18 1 2.8971 -3.1423 7.3278 19 6 2.0323 -0.7104 -1.2306 20 6 2.8021 -0.1644 -2.1727 21 6 3.1404 -1.0124 -3.2138 22 6 2.6438 -2.2476 -3.1162 23 17 2.8987 -3.5226 -4.2665 24 16 1.6987 -2.3881 -1.6395 25 1 -0.3633 0.5139 -0.8899 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8901 28 1 1.8644 -2.0132 3.5567 29 1 3.3174 -0.9850 3.5563 30 1 2.6866 -1.6320 6.0949 31 1 1.9351 -0.5662 10.4157 32 1 3.1371 0.8613 -2.1266 33 1 3.7589 -0.6983 -4.0416 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000750552221.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:58:00 Heat of formation + Delta-G solvation = -88.955906 kcal Electronic energy + Delta-G solvation = -20830.402748 eV Core-core repulsion = 17202.446348 eV Total energy + Delta-G solvation = -3627.956400 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.032 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -40.66471 -38.62956 -38.19734 -37.00331 -36.24814 -34.28206 -34.07926 -31.82371 -29.06573 -28.45504 -25.33903 -24.56173 -23.57586 -20.96149 -19.92198 -19.68011 -18.65269 -17.92825 -17.48072 -16.61505 -16.25670 -16.00164 -15.55562 -14.94081 -14.54133 -14.08660 -13.98082 -13.78696 -13.62707 -13.20963 -13.00015 -12.77126 -12.50887 -12.30052 -12.18709 -12.12438 -11.95902 -11.65317 -11.31813 -11.28459 -10.93617 -10.67009 -10.58089 -10.47529 -10.07129 -9.69993 -8.90565 -8.74786 -8.69451 -8.31710 -6.41368 -3.94384 0.44630 0.81027 1.54654 1.92362 2.11642 2.18564 2.63760 2.97150 3.01923 3.10790 3.52500 4.01836 4.07616 4.29202 4.61981 4.78899 4.89835 4.96768 5.08794 5.11721 5.30633 5.43630 5.48652 5.51257 5.58269 5.64457 5.71448 5.90918 5.97088 6.42447 7.41965 7.69020 7.98359 8.45252 8.81347 9.27513 9.62758 10.70807 Molecular weight = 317.03amu Principal moments of inertia in cm(-1) A = 0.028194 B = 0.002519 C = 0.002378 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 992.878678 B =11113.582214 C =11770.591622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.010 4.010 3 H 0.132 0.868 4 C 0.458 3.542 5 O -0.501 6.501 6 O -0.319 6.319 7 C 0.057 3.943 8 C 0.447 3.553 9 O -0.557 6.557 10 N -0.579 5.579 11 C -0.308 4.308 12 H 0.123 0.877 13 C 0.045 3.955 14 N -0.874 5.874 15 Si 0.879 3.121 16 H -0.269 1.269 17 H -0.274 1.274 18 H -0.268 1.268 19 C -0.164 4.164 20 C -0.122 4.122 21 C -0.120 4.120 22 C -0.157 4.157 23 Cl -0.018 7.018 24 S 0.196 5.804 25 H 0.078 0.922 26 H 0.062 0.938 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.373 0.627 31 H 0.276 0.724 32 H 0.150 0.850 33 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.216 -4.361 -25.981 26.438 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.031 4.031 3 H 0.149 0.851 4 C 0.299 3.701 5 O -0.389 6.389 6 O -0.233 6.233 7 C -0.020 4.020 8 C 0.232 3.768 9 O -0.439 6.439 10 N -0.219 5.219 11 C -0.437 4.437 12 H 0.140 0.860 13 C -0.159 4.159 14 N -0.513 5.513 15 Si 0.705 3.295 16 H -0.194 1.194 17 H -0.199 1.199 18 H -0.194 1.194 19 C -0.282 4.282 20 C -0.153 4.153 21 C -0.153 4.153 22 C -0.301 4.301 23 Cl 0.010 6.990 24 S 0.460 5.540 25 H 0.097 0.903 26 H 0.081 0.919 27 H 0.106 0.894 28 H 0.106 0.894 29 H 0.106 0.894 30 H 0.206 0.794 31 H 0.086 0.914 32 H 0.168 0.832 33 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.139 -5.291 -25.186 25.761 hybrid contribution 1.969 -0.399 -0.479 2.066 sum 3.108 -5.690 -25.665 26.472 Atomic orbital electron populations 1.21899 0.90294 1.03547 1.04727 1.19434 0.98686 0.99967 0.85025 0.85061 1.23492 0.78003 0.83185 0.85375 1.90696 1.35255 1.25638 1.87323 1.86542 1.68578 1.54463 1.13718 1.22785 0.99698 0.95715 0.83818 1.19169 0.86551 0.87566 0.83497 1.90605 1.40156 1.26814 1.86320 1.42038 1.46999 1.27390 1.05458 1.19419 1.30735 1.12542 0.80973 0.85986 1.25039 0.97710 0.98178 0.94948 1.69610 1.44061 1.40064 0.97596 0.86682 0.81314 0.82826 0.78705 1.19390 1.19926 1.19350 1.24064 1.05913 0.97713 1.00524 1.19927 0.99689 1.01757 0.93912 1.20104 1.02614 0.91436 1.01103 1.25390 1.10512 0.94810 0.99368 1.98365 1.95487 1.48453 1.56676 1.84537 1.48470 1.08670 1.12279 0.90346 0.91914 0.89358 0.89368 0.89353 0.79381 0.91360 0.83230 0.83369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 42. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.32 9.05 37.16 0.34 -0.99 16 2 C -0.01 -0.10 3.20 -92.92 -0.30 -0.40 16 3 H 0.13 1.07 8.08 -51.93 -0.42 0.65 16 4 C 0.46 6.50 7.22 36.00 0.26 6.76 16 5 O -0.50 -7.97 14.98 -18.75 -0.28 -8.25 16 6 O -0.32 -5.37 9.66 -45.91 -0.44 -5.81 16 7 C 0.06 1.00 5.94 36.01 0.21 1.21 16 8 C 0.45 10.12 7.86 -10.99 -0.09 10.03 16 9 O -0.56 -14.93 16.08 -14.12 -0.23 -15.16 16 10 N -0.58 -13.53 5.09 -10.96 -0.06 -13.58 16 11 C -0.31 -8.52 10.16 -14.94 -0.15 -8.67 16 12 H 0.12 3.84 7.39 -52.48 -0.39 3.45 16 13 C 0.05 1.21 5.50 -17.47 -0.10 1.12 16 14 N -0.87 -24.90 13.96 55.50 0.77 -24.12 16 15 Si 0.88 18.87 27.74 -169.99 -4.71 14.15 16 16 H -0.27 -5.65 7.11 56.52 0.40 -5.25 16 17 H -0.27 -5.90 7.11 56.52 0.40 -5.50 16 18 H -0.27 -5.25 6.52 56.52 0.37 -4.88 16 19 C -0.16 -1.67 4.61 -36.01 -0.17 -1.83 16 20 C -0.12 -1.06 10.01 -41.20 -0.41 -1.48 16 21 C -0.12 -1.05 10.13 -41.16 -0.42 -1.47 16 22 C -0.16 -1.55 7.10 29.07 0.21 -1.34 16 23 Cl -0.02 -0.17 29.29 -51.86 -1.52 -1.68 16 24 S 0.20 2.10 22.17 -107.50 -2.38 -0.29 16 25 H 0.08 0.54 8.14 -51.93 -0.42 0.11 16 26 H 0.06 0.58 8.01 -51.93 -0.42 0.16 16 27 H 0.09 0.87 8.11 -51.92 -0.42 0.45 16 28 H 0.09 1.36 8.13 -51.93 -0.42 0.94 16 29 H 0.09 1.36 8.13 -51.93 -0.42 0.94 16 30 H 0.37 7.59 5.76 -40.82 -0.24 7.36 16 31 H 0.28 7.23 8.31 -40.82 -0.34 6.89 16 32 H 0.15 0.94 8.06 -52.49 -0.42 0.52 16 33 H 0.15 0.99 8.06 -52.48 -0.42 0.56 16 LS Contribution 326.68 15.07 4.92 4.92 Total: -1.00 -32.79 326.68 -7.70 -40.48 By element: Atomic # 1 Polarization: 9.56 SS G_CDS: -3.16 Total: 6.39 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: -0.61 Total: 2.94 kcal Atomic # 7 Polarization: -38.43 SS G_CDS: 0.72 Total: -37.71 kcal Atomic # 8 Polarization: -28.27 SS G_CDS: -0.95 Total: -29.22 kcal Atomic # 14 Polarization: 18.87 SS G_CDS: -4.71 Total: 14.15 kcal Atomic # 16 Polarization: 2.10 SS G_CDS: -2.38 Total: -0.29 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.52 Total: -1.68 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -32.79 -7.70 -40.48 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000750552221.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.471 kcal (2) G-P(sol) polarization free energy of solvation -32.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.698 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.956 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds