Wall clock time and date at job start Tue Mar 31 2020 11:20:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.32001 * 119.44867 * 2 1 4 4 C 1.31638 * 121.94499 * 180.02562 * 3 2 1 5 5 C 1.39616 * 120.59237 * 359.97438 * 4 3 2 6 6 C 1.47653 * 120.56951 * 179.97438 * 5 4 3 7 7 O 1.21483 * 119.99774 * 179.97438 * 6 5 4 8 8 O 1.34718 * 120.00011 * 0.02562 * 6 5 4 9 9 C 1.45202 * 116.99571 * 179.97438 * 8 6 5 10 10 C 1.53006 * 109.46867 * 179.97438 * 9 8 6 11 11 C 1.52997 * 109.47127 * 180.02562 * 10 9 8 12 12 C 1.50696 * 109.47055 * 180.02562 * 11 10 9 13 13 H 1.08000 * 120.00290 * 359.97438 * 12 11 10 14 14 C 1.37879 * 120.00258 * 180.02562 * 12 11 10 15 15 N 1.31516 * 119.99506 * 359.97438 * 14 12 11 16 16 Si 1.86800 * 120.00308 * 179.97438 * 14 12 11 17 17 H 1.48496 * 109.46785 * 359.97438 * 16 14 12 18 18 H 1.48497 * 109.47025 * 119.99441 * 16 14 12 19 19 H 1.48498 * 109.46692 * 239.99413 * 16 14 12 20 20 C 1.40176 * 118.85756 * 0.25448 * 5 4 3 21 21 Cl 1.73600 * 120.88373 * 179.74690 * 20 5 4 22 22 C 1.38317 * 119.45021 * 180.02562 * 2 1 3 23 23 Cl 1.73601 * 120.36475 * 0.02562 * 22 2 1 24 24 H 1.09001 * 109.46880 * 89.99795 * 1 2 3 25 25 H 1.08992 * 109.47503 * 210.00066 * 1 2 3 26 26 H 1.09003 * 109.46994 * 330.00522 * 1 2 3 27 27 H 1.08001 * 119.70306 * 180.02562 * 4 3 2 28 28 H 1.09001 * 109.46860 * 60.00397 * 9 8 6 29 29 H 1.08993 * 109.47426 * 299.99759 * 9 8 6 30 30 H 1.09001 * 109.46801 * 300.00397 * 10 9 8 31 31 H 1.09001 * 109.46998 * 59.99993 * 10 9 8 32 32 H 1.08996 * 109.46952 * 300.00302 * 11 10 9 33 33 H 1.09001 * 109.46832 * 60.00321 * 11 10 9 34 34 H 0.96999 * 119.99910 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1560 1.1495 0.0000 4 6 3.4711 1.2068 -0.0005 5 6 4.2333 0.0371 -0.0005 6 6 5.7084 0.1020 -0.0016 7 8 6.3615 -0.9224 -0.0012 8 8 6.3301 1.2971 -0.0021 9 6 7.7821 1.2848 -0.0027 10 6 8.3042 2.7230 -0.0038 11 6 9.8341 2.7102 -0.0051 12 6 10.3484 4.1267 -0.0056 13 1 9.6536 4.9534 -0.0055 14 6 11.7060 4.3673 -0.0072 15 7 12.5522 3.3604 -0.0078 16 14 12.3435 6.1231 -0.0086 17 1 11.1964 7.0661 -0.0082 18 1 13.1717 6.3500 1.2030 19 1 13.1692 6.3489 -1.2220 20 6 3.5741 -1.2000 -0.0054 21 17 4.4698 -2.6870 -0.0123 22 6 2.1871 -1.2044 -0.0005 23 17 1.3142 -2.7051 -0.0019 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3634 -0.8899 0.5138 26 1 -0.3633 0.8901 0.5138 27 1 3.9649 2.1673 -0.0001 28 1 8.1407 0.7678 -0.8927 29 1 8.1414 0.7682 0.8872 30 1 7.9448 3.2393 -0.8940 31 1 7.9455 3.2405 0.8859 32 1 10.1938 2.1937 0.8849 33 1 10.1924 2.1928 -0.8951 34 1 13.5073 3.5296 -0.0085 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000758506675.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:20:04 Heat of formation + Delta-G solvation = -73.585946 kcal Electronic energy + Delta-G solvation = -20677.856714 eV Core-core repulsion = 17048.523099 eV Total energy + Delta-G solvation = -3629.333615 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 5.00 seconds Orbital eigenvalues (eV) -41.23507 -39.90825 -37.34483 -37.16519 -36.49161 -34.09920 -33.63262 -32.49824 -31.73117 -29.04157 -27.04489 -24.49783 -24.09662 -22.96523 -21.27709 -20.40799 -18.48260 -17.83052 -16.82205 -16.65410 -16.52508 -16.09286 -15.51057 -15.43302 -14.49524 -14.44089 -14.14979 -13.45024 -13.37236 -13.17725 -12.99707 -12.64047 -12.30927 -12.25024 -12.11144 -12.00835 -11.75852 -11.55853 -11.01585 -10.71553 -10.63824 -10.50143 -10.48060 -10.10466 -9.97338 -9.77461 -9.55090 -9.49646 -9.18218 -8.41589 -6.06124 -4.09231 -0.15629 0.22952 1.18474 1.54907 2.22741 2.54278 3.06410 3.28647 3.36272 3.40295 3.54609 3.86909 4.13487 4.29987 4.42001 4.55410 4.72786 5.04508 5.09954 5.14731 5.30126 5.45654 5.51108 5.53317 5.74647 5.93934 6.31860 6.48290 6.72872 6.92532 7.12270 7.57070 7.67346 7.69037 7.92091 8.32629 8.97288 9.55377 11.05347 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.029636 B = 0.002412 C = 0.002236 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 944.576224 B =11607.762998 C =12521.280674 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C 0.184 3.816 3 N -0.473 5.473 4 C 0.185 3.815 5 C -0.165 4.165 6 C 0.505 3.495 7 O -0.482 6.482 8 O -0.351 6.351 9 C 0.071 3.929 10 C -0.109 4.109 11 C 0.024 3.976 12 C -0.521 4.521 13 H 0.058 0.942 14 C 0.056 3.944 15 N -0.894 5.894 16 Si 0.895 3.105 17 H -0.272 1.272 18 H -0.284 1.284 19 H -0.284 1.284 20 C 0.064 3.936 21 Cl 0.012 6.988 22 C -0.107 4.107 23 Cl -0.024 7.024 24 H 0.093 0.907 25 H 0.086 0.914 26 H 0.091 0.909 27 H 0.192 0.808 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.061 0.939 31 H 0.061 0.939 32 H 0.020 0.980 33 H 0.020 0.980 34 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -26.321 -10.733 -0.013 28.426 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.046 3.954 3 N -0.182 5.182 4 C 0.027 3.973 5 C -0.170 4.170 6 C 0.347 3.653 7 O -0.369 6.369 8 O -0.267 6.267 9 C -0.002 4.002 10 C -0.147 4.147 11 C -0.013 4.013 12 C -0.559 4.559 13 H 0.077 0.923 14 C -0.145 4.145 15 N -0.533 5.533 16 Si 0.722 3.278 17 H -0.196 1.196 18 H -0.210 1.210 19 H -0.210 1.210 20 C 0.028 3.972 21 Cl 0.042 6.958 22 C -0.137 4.137 23 Cl 0.005 6.995 24 H 0.112 0.888 25 H 0.105 0.895 26 H 0.110 0.890 27 H 0.209 0.791 28 H 0.088 0.912 29 H 0.089 0.911 30 H 0.080 0.920 31 H 0.080 0.920 32 H 0.038 0.962 33 H 0.038 0.962 34 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -26.364 -10.576 -0.013 28.406 hybrid contribution 1.236 -0.264 -0.015 1.264 sum -25.128 -10.840 -0.028 27.367 Atomic orbital electron populations 1.20961 0.86764 1.04952 1.04498 1.21592 0.98243 0.85732 0.89796 1.67848 1.09687 1.26796 1.13909 1.23526 0.88379 0.98356 0.87052 1.20109 0.93016 0.93019 1.10838 1.20399 0.87472 0.82950 0.74504 1.90935 1.66807 1.35129 1.44076 1.86507 1.25910 1.31068 1.83240 1.23616 0.72479 1.01572 1.02532 1.21791 0.99762 0.91009 1.02112 1.19057 0.86747 0.97792 0.97747 1.21197 0.91651 0.92128 1.50958 0.92341 1.25035 0.97071 0.97213 0.95181 1.69974 1.02322 1.30472 1.50563 0.86490 0.78922 0.84719 0.77620 1.19645 1.20965 1.20970 1.21345 0.90737 0.89920 0.95215 1.98478 1.73652 1.28613 1.95107 1.21635 0.90674 0.90454 1.10893 1.98398 1.74921 1.29522 1.96700 0.88825 0.89498 0.88997 0.79104 0.91155 0.91146 0.92000 0.91994 0.96187 0.96187 0.92919 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.62 9.77 36.01 0.35 -0.27 16 2 C 0.18 1.62 6.78 -82.49 -0.56 1.06 16 3 N -0.47 -4.72 10.25 -9.12 -0.09 -4.82 16 4 C 0.19 1.91 10.79 -17.12 -0.18 1.73 16 5 C -0.17 -2.01 5.89 -104.81 -0.62 -2.63 16 6 C 0.50 7.47 7.90 34.57 0.27 7.74 16 7 O -0.48 -8.17 13.94 -19.25 -0.27 -8.44 16 8 O -0.35 -5.39 9.50 -40.54 -0.39 -5.77 16 9 C 0.07 1.23 5.48 37.16 0.20 1.43 16 10 C -0.11 -2.15 5.53 -26.73 -0.15 -2.30 16 11 C 0.02 0.59 4.97 -27.89 -0.14 0.45 16 12 C -0.52 -14.41 9.11 -34.44 -0.31 -14.72 16 13 H 0.06 1.56 7.74 -52.49 -0.41 1.16 16 14 C 0.06 1.59 5.46 -17.82 -0.10 1.50 16 15 N -0.89 -26.56 13.29 55.43 0.74 -25.82 16 16 Si 0.89 21.32 29.54 -169.99 -5.02 16.30 16 17 H -0.27 -6.31 7.11 56.52 0.40 -5.91 16 18 H -0.28 -6.70 7.11 56.52 0.40 -6.29 16 19 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 20 C 0.06 0.74 6.41 -38.68 -0.25 0.49 16 21 Cl 0.01 0.14 25.36 -51.86 -1.32 -1.17 16 22 C -0.11 -1.03 6.33 -39.38 -0.25 -1.27 16 23 Cl -0.02 -0.20 26.41 -51.86 -1.37 -1.57 16 24 H 0.09 0.40 8.14 -51.93 -0.42 -0.02 16 25 H 0.09 0.39 6.87 -51.93 -0.36 0.03 16 26 H 0.09 0.44 8.14 -51.93 -0.42 0.02 16 27 H 0.19 1.67 7.62 -52.49 -0.40 1.27 16 28 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 29 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 30 H 0.06 1.19 8.14 -51.93 -0.42 0.76 16 31 H 0.06 1.19 8.14 -51.93 -0.42 0.77 16 32 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 33 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 34 H 0.26 7.29 8.31 -40.82 -0.34 6.96 16 LS Contribution 329.70 15.07 4.97 4.97 Total: -1.00 -30.71 329.70 -8.16 -38.86 By element: Atomic # 1 Polarization: -2.07 SS G_CDS: -3.68 Total: -5.75 kcal Atomic # 6 Polarization: -5.07 SS G_CDS: -1.73 Total: -6.80 kcal Atomic # 7 Polarization: -31.28 SS G_CDS: 0.64 Total: -30.64 kcal Atomic # 8 Polarization: -13.56 SS G_CDS: -0.65 Total: -14.21 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -5.02 Total: 16.30 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -2.68 Total: -2.74 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -30.71 -8.16 -38.86 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000758506675.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.723 kcal (2) G-P(sol) polarization free energy of solvation -30.707 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.430 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.156 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.863 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 5.00 seconds