Wall clock time and date at job start Tue Mar 31 2020 11:11:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31521 * 1 3 3 Si 1.86799 * 119.99534 * 2 1 4 4 H 1.48496 * 109.47106 * 270.00038 * 3 2 1 5 5 H 1.48499 * 109.47377 * 30.00611 * 3 2 1 6 6 H 1.48508 * 109.46360 * 150.00275 * 3 2 1 7 7 C 1.37880 * 119.99950 * 180.02562 * 2 1 3 8 8 H 1.07999 * 119.99970 * 359.97438 * 7 2 1 9 9 C 1.50698 * 119.99551 * 179.97438 * 7 2 1 10 10 C 1.52999 * 109.46670 * 180.02562 * 9 7 2 11 11 C 1.53005 * 109.46746 * 180.02562 * 10 9 7 12 12 O 1.45204 * 109.46886 * 179.97438 * 11 10 9 13 13 C 1.34765 * 116.99936 * 180.02562 * 12 11 10 14 14 O 1.21532 * 120.00108 * 359.97438 * 13 12 11 15 15 C 1.47293 * 120.00292 * 180.02562 * 13 12 11 16 16 C 1.39839 * 120.19943 * 5.88506 * 15 13 12 17 17 C 1.37811 * 119.92256 * 180.30545 * 16 15 13 18 18 Cl 1.73604 * 119.82462 * 179.72709 * 17 16 15 19 19 C 1.38723 * 120.34876 * 359.70646 * 17 16 15 20 20 C 1.38033 * 120.40578 * 359.97438 * 19 17 16 21 21 Cl 1.73601 * 119.96340 * 180.02562 * 20 19 17 22 22 C 1.39048 * 120.06800 * 0.02562 * 20 19 17 23 23 N 1.38954 * 120.17352 * 179.97438 * 22 20 19 24 24 H 0.96998 * 120.00292 * 359.97438 * 1 2 3 25 25 H 1.08999 * 109.47311 * 59.99680 * 9 7 2 26 26 H 1.09002 * 109.46751 * 299.99550 * 9 7 2 27 27 H 1.08993 * 109.47439 * 60.00104 * 10 9 7 28 28 H 1.09002 * 109.47041 * 299.99220 * 10 9 7 29 29 H 1.08999 * 109.47323 * 59.99474 * 11 10 9 30 30 H 1.09002 * 109.47122 * 299.99119 * 11 10 9 31 31 H 1.07996 * 120.03936 * 0.03796 * 16 15 13 32 32 H 1.07991 * 119.79408 * 180.02562 * 19 17 16 33 33 H 0.97001 * 119.99951 * 24.90569 * 23 22 20 34 34 H 0.97002 * 119.99914 * 204.90608 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3152 0.0000 0.0000 3 14 2.2491 1.6178 0.0000 4 1 2.4965 2.0465 -1.4000 5 1 1.4465 2.6527 0.7001 6 1 3.5467 1.4401 0.7001 7 6 2.0046 -1.1941 -0.0005 8 1 1.4646 -2.1294 -0.0005 9 6 3.5116 -1.1940 -0.0011 10 6 4.0216 -2.6365 -0.0023 11 6 5.5516 -2.6364 -0.0022 12 8 6.0357 -4.0054 -0.0027 13 6 7.3717 -4.1819 -0.0022 14 8 8.1120 -3.2181 -0.0018 15 6 7.9348 -5.5430 -0.0032 16 6 7.0928 -6.6524 -0.1287 17 6 7.6252 -7.9235 -0.1226 18 17 6.5769 -9.2993 -0.2713 19 6 8.9943 -8.1095 0.0013 20 6 9.8389 -7.0241 0.1194 21 17 11.5505 -7.2701 0.2731 22 6 9.3201 -5.7340 0.1153 23 7 10.1683 -4.6398 0.2345 24 1 -0.4850 0.8400 0.0004 25 1 3.8753 -0.6803 0.8888 26 1 3.8745 -0.6800 -0.8912 27 1 3.6580 -3.1497 -0.8924 28 1 3.6587 -3.1509 0.8876 29 1 5.9149 -2.1232 0.8881 30 1 5.9150 -2.1219 -0.8919 31 1 6.0263 -6.5135 -0.2258 32 1 9.4019 -9.1095 0.0046 33 1 11.0970 -4.7145 -0.0352 34 1 9.8316 -3.8014 0.5875 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000791199471.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:11:36 Heat of formation + Delta-G solvation = -85.304847 kcal Electronic energy + Delta-G solvation = -20733.154014 eV Core-core repulsion = 17103.312229 eV Total energy + Delta-G solvation = -3629.841784 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -40.92886 -39.39083 -37.18901 -36.94836 -36.40655 -34.74360 -34.09902 -32.10261 -31.54873 -29.10267 -27.67355 -24.94269 -23.27811 -22.54791 -21.25654 -20.29787 -18.40862 -17.61220 -17.41489 -17.11645 -16.63192 -16.43712 -15.56676 -15.25482 -14.99319 -14.51076 -14.25639 -14.04463 -13.51571 -13.00764 -12.79209 -12.76212 -12.51160 -12.43525 -11.96811 -11.84652 -11.61262 -11.28352 -11.11494 -11.01990 -10.76624 -10.52271 -10.50411 -10.06070 -9.86449 -9.76703 -9.48380 -9.27998 -8.59240 -8.12523 -6.09320 -4.08603 0.18772 0.72091 1.43213 1.93629 2.18551 2.64599 3.15928 3.27606 3.35437 3.35917 3.38044 4.19181 4.40455 4.50174 4.60287 4.66896 5.02483 5.21285 5.23685 5.38698 5.39599 5.43227 5.61308 5.78911 5.88232 6.22144 6.33795 6.53781 6.73031 6.88083 7.16773 7.28309 7.36678 7.65500 7.73016 8.47040 8.95001 9.51961 11.03821 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.019375 B = 0.002634 C = 0.002325 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1444.824930 B =10626.884999 C =12039.222116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.901 5.901 2 C 0.067 3.933 3 Si 0.879 3.121 4 H -0.276 1.276 5 H -0.287 1.287 6 H -0.265 1.265 7 C -0.522 4.522 8 H 0.074 0.926 9 C -0.010 4.010 10 C -0.102 4.102 11 C 0.067 3.933 12 O -0.347 6.347 13 C 0.520 3.480 14 O -0.517 6.517 15 C -0.185 4.185 16 C 0.004 3.996 17 C -0.097 4.097 18 Cl -0.056 7.056 19 C -0.020 4.020 20 C -0.118 4.118 21 Cl -0.053 7.053 22 C 0.294 3.706 23 N -0.845 5.845 24 H 0.264 0.736 25 H 0.019 0.981 26 H 0.015 0.985 27 H 0.067 0.933 28 H 0.067 0.933 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.158 0.842 32 H 0.149 0.851 33 H 0.402 0.598 34 H 0.419 0.581 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 23.237 -17.603 0.225 29.153 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.539 5.539 2 C -0.134 4.134 3 Si 0.707 3.293 4 H -0.202 1.202 5 H -0.213 1.213 6 H -0.190 1.190 7 C -0.560 4.560 8 H 0.092 0.908 9 C -0.047 4.047 10 C -0.140 4.140 11 C -0.005 4.005 12 O -0.263 6.263 13 C 0.366 3.634 14 O -0.408 6.408 15 C -0.192 4.192 16 C -0.016 4.016 17 C -0.126 4.126 18 Cl -0.028 7.028 19 C -0.040 4.040 20 C -0.150 4.150 21 Cl -0.024 7.024 22 C 0.180 3.820 23 N -0.390 5.390 24 H 0.074 0.926 25 H 0.037 0.963 26 H 0.033 0.967 27 H 0.086 0.914 28 H 0.086 0.914 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.175 0.825 32 H 0.166 0.834 33 H 0.232 0.768 34 H 0.258 0.742 Dipole moment (debyes) X Y Z Total from point charges 23.289 -17.248 0.244 28.982 hybrid contribution 0.695 1.167 -0.022 1.358 sum 23.984 -16.081 0.221 28.877 Atomic orbital electron populations 1.69907 1.06283 1.27004 1.50756 1.25019 0.94756 0.99174 0.94457 0.86785 0.80357 0.83607 0.78590 1.20206 1.21280 1.18996 1.21047 0.89002 0.94688 1.51279 0.90755 1.19517 0.97580 0.90978 0.96671 1.21580 0.88524 1.00901 1.02980 1.23576 0.97187 0.77501 1.02282 1.86557 1.21956 1.34678 1.83070 1.20568 0.81694 0.88453 0.72691 1.90637 1.60130 1.42420 1.47605 1.18484 0.91331 0.91477 1.17882 1.21344 1.01328 0.89072 0.89833 1.20279 0.90737 0.88983 1.12638 1.98389 1.65709 1.41983 1.96673 1.20900 0.90808 0.98919 0.93418 1.20109 0.86157 0.92217 1.16473 1.98367 1.10663 1.96679 1.96703 1.17314 0.88733 0.87086 0.88837 1.43043 1.12575 1.13476 1.69894 0.92618 0.96277 0.96717 0.91402 0.91388 0.91307 0.91289 0.82468 0.83371 0.76780 0.74184 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -27.49 13.96 55.43 0.77 -26.72 16 2 C 0.07 1.94 5.47 -17.82 -0.10 1.85 16 3 Si 0.88 21.39 27.47 -169.99 -4.67 16.72 16 4 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 5 H -0.29 -6.93 7.11 56.52 0.40 -6.52 16 6 H -0.27 -6.17 6.54 56.52 0.37 -5.80 16 7 C -0.52 -14.61 9.66 -34.44 -0.33 -14.95 16 8 H 0.07 2.23 7.99 -52.49 -0.42 1.81 16 9 C -0.01 -0.23 4.04 -27.88 -0.11 -0.34 16 10 C -0.10 -1.95 5.53 -26.73 -0.15 -2.09 16 11 C 0.07 1.10 5.48 37.16 0.20 1.30 16 12 O -0.35 -5.20 9.49 -40.67 -0.39 -5.58 16 13 C 0.52 7.19 7.87 34.41 0.27 7.46 16 14 O -0.52 -7.73 13.60 -19.29 -0.26 -8.00 16 15 C -0.18 -2.09 5.89 -104.82 -0.62 -2.71 16 16 C 0.00 0.04 9.38 -39.14 -0.37 -0.33 16 17 C -0.10 -0.87 6.31 -39.56 -0.25 -1.12 16 18 Cl -0.06 -0.49 28.94 -51.86 -1.50 -1.99 16 19 C -0.02 -0.16 9.58 -39.48 -0.38 -0.54 16 20 C -0.12 -1.02 6.33 -39.36 -0.25 -1.27 16 21 Cl -0.05 -0.39 27.77 -51.86 -1.44 -1.83 16 22 C 0.29 2.94 6.76 -83.54 -0.56 2.38 16 23 N -0.85 -7.70 8.31 32.58 0.27 -7.43 16 24 H 0.26 7.53 8.31 -40.82 -0.34 7.19 16 25 H 0.02 0.44 7.20 -51.93 -0.37 0.06 16 26 H 0.01 0.33 7.57 -51.93 -0.39 -0.06 16 27 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 28 H 0.07 1.29 8.14 -51.93 -0.42 0.86 16 29 H 0.07 1.10 8.14 -51.93 -0.42 0.68 16 30 H 0.07 1.11 8.14 -51.93 -0.42 0.69 16 31 H 0.16 1.54 7.62 -52.49 -0.40 1.14 16 32 H 0.15 0.88 8.06 -52.49 -0.42 0.46 16 33 H 0.40 2.88 7.88 -40.82 -0.32 2.56 16 34 H 0.42 4.28 6.11 -40.82 -0.25 4.03 16 LS Contribution 325.90 15.07 4.91 4.91 Total: -1.00 -30.15 325.90 -8.38 -38.54 By element: Atomic # 1 Polarization: 5.19 SS G_CDS: -3.44 Total: 1.75 kcal Atomic # 6 Polarization: -7.72 SS G_CDS: -2.64 Total: -10.36 kcal Atomic # 7 Polarization: -35.19 SS G_CDS: 1.04 Total: -34.15 kcal Atomic # 8 Polarization: -12.93 SS G_CDS: -0.65 Total: -13.58 kcal Atomic # 14 Polarization: 21.39 SS G_CDS: -4.67 Total: 16.72 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -2.94 Total: -3.82 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -30.15 -8.38 -38.54 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000791199471.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.767 kcal (2) G-P(sol) polarization free energy of solvation -30.155 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.922 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.538 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds