Wall clock time and date at job start Tue Mar 31 2020 11:19:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.31673 * 119.69888 * 2 1 4 4 C 1.32037 * 121.88269 * 180.26692 * 3 2 1 5 5 Cl 1.73596 * 119.48109 * 179.74676 * 4 3 2 6 6 C 1.38687 * 121.03712 * 359.77042 * 4 3 2 7 7 Cl 1.73591 * 120.36029 * 179.97438 * 6 4 3 8 8 C 1.38341 * 119.27313 * 359.97438 * 6 4 3 9 9 C 1.39573 * 119.70009 * 179.77144 * 2 1 3 10 10 C 1.47664 * 120.53996 * 0.02562 * 9 2 1 11 11 O 1.21478 * 120.00318 * 353.50062 * 10 9 2 12 12 O 1.34718 * 119.99769 * 173.50310 * 10 9 2 13 13 C 1.45200 * 117.00077 * 179.97438 * 12 10 9 14 14 C 1.52998 * 109.47025 * 179.97438 * 13 12 10 15 15 C 1.52999 * 109.46782 * 180.02562 * 14 13 12 16 16 C 1.50708 * 109.47036 * 180.02562 * 15 14 13 17 17 H 1.08000 * 119.99630 * 359.97438 * 16 15 14 18 18 C 1.37879 * 120.00014 * 179.97438 * 16 15 14 19 19 N 1.31513 * 119.99998 * 359.97438 * 18 16 15 20 20 Si 1.86801 * 119.99883 * 179.97438 * 18 16 15 21 21 H 1.48495 * 109.46906 * 90.00244 * 20 18 16 22 22 H 1.48501 * 109.46905 * 209.99740 * 20 18 16 23 23 H 1.48496 * 109.47015 * 329.99912 * 20 18 16 24 24 H 1.09012 * 109.47444 * 263.65079 * 1 2 3 25 25 H 1.08998 * 109.47587 * 23.65364 * 1 2 3 26 26 H 1.09000 * 109.47143 * 143.65602 * 1 2 3 27 27 H 1.08000 * 120.85246 * 180.02562 * 8 6 4 28 28 H 1.08999 * 109.47030 * 300.00160 * 13 12 10 29 29 H 1.09002 * 109.47151 * 59.99777 * 13 12 10 30 30 H 1.08999 * 109.47418 * 300.00009 * 14 13 12 31 31 H 1.08993 * 109.47108 * 60.00538 * 14 13 12 32 32 H 1.09009 * 109.47377 * 299.99744 * 15 14 13 33 33 H 1.08998 * 109.47556 * 60.00303 * 15 14 13 34 34 H 0.96996 * 119.99910 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1593 1.1438 0.0000 4 6 3.4787 1.1941 -0.0052 5 17 4.2748 2.7367 -0.0116 6 6 4.2386 0.0339 -0.0062 7 17 5.9723 0.1205 -0.0138 8 6 3.5997 -1.1932 -0.0011 9 6 2.1985 -1.2124 0.0048 10 6 1.4655 -2.4942 0.0094 11 8 0.2566 -2.5023 0.1280 12 8 2.1376 -3.6548 -0.1180 13 6 1.3524 -4.8762 -0.1045 14 6 2.2817 -6.0816 -0.2603 15 6 1.4543 -7.3684 -0.2468 16 6 2.3696 -8.5559 -0.3996 17 1 3.4349 -8.4074 -0.4971 18 6 1.8471 -9.8317 -0.4150 19 7 0.5499 -10.0125 -0.2958 20 14 2.9816 -11.3035 -0.6052 21 1 3.4203 -11.7668 0.7358 22 1 2.2573 -12.4008 -1.2955 23 1 4.1689 -10.9128 -1.4069 24 1 -0.3634 -0.1137 1.0214 25 1 -0.3634 0.9413 -0.4123 26 1 -0.3633 -0.8278 -0.6090 27 1 4.1662 -2.1126 -0.0013 28 1 0.8141 -4.9516 0.8402 29 1 0.6392 -4.8587 -0.9287 30 1 2.8197 -6.0059 -1.2053 31 1 2.9951 -6.0993 0.5635 32 1 0.9159 -7.4444 0.6980 33 1 0.7411 -7.3506 -1.0709 34 1 0.1822 -10.9100 -0.3069 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000805723220.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:19:55 Heat of formation + Delta-G solvation = -77.834651 kcal Electronic energy + Delta-G solvation = -20666.378981 eV Core-core repulsion = 17036.861128 eV Total energy + Delta-G solvation = -3629.517852 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.39982 -39.92784 -37.41870 -37.16577 -36.69173 -34.16527 -33.47208 -32.84392 -31.73076 -28.47291 -27.15779 -25.37521 -23.57937 -22.85695 -21.43789 -20.44418 -18.36658 -17.89294 -17.10713 -16.87257 -16.61172 -16.19311 -15.54129 -15.20166 -14.51400 -14.22080 -14.15483 -13.62675 -13.46881 -13.24873 -12.70082 -12.55680 -12.26239 -12.22610 -12.02876 -11.95130 -11.88550 -11.46879 -11.02847 -10.75599 -10.74327 -10.64662 -10.52173 -10.41216 -10.23048 -9.82522 -9.58028 -9.34450 -9.22587 -8.43693 -6.08501 -4.11795 -0.25165 0.32237 1.06986 1.39157 2.10562 2.49580 2.97699 3.27811 3.34363 3.37471 3.66276 3.96940 4.01964 4.22829 4.39469 4.64028 4.92136 5.16784 5.27704 5.37539 5.40467 5.45363 5.46524 5.51719 5.86896 5.93014 6.30739 6.43671 6.68253 6.88338 6.93233 7.53476 7.60590 7.63809 7.89312 8.29758 8.94347 9.52919 11.02895 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.021660 B = 0.002456 C = 0.002212 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1292.401649 B =11399.142432 C =12654.443097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C 0.217 3.783 3 N -0.469 5.469 4 C 0.215 3.785 5 Cl 0.000 7.000 6 C -0.101 4.101 7 Cl -0.024 7.024 8 C 0.008 3.992 9 C -0.162 4.162 10 C 0.511 3.489 11 O -0.490 6.490 12 O -0.351 6.351 13 C 0.070 3.930 14 C -0.110 4.110 15 C 0.024 3.976 16 C -0.523 4.523 17 H 0.058 0.942 18 C 0.057 3.943 19 N -0.894 5.894 20 Si 0.895 3.105 21 H -0.280 1.280 22 H -0.286 1.286 23 H -0.273 1.273 24 H 0.095 0.905 25 H 0.080 0.920 26 H 0.109 0.891 27 H 0.174 0.826 28 H 0.071 0.929 29 H 0.071 0.929 30 H 0.061 0.939 31 H 0.061 0.939 32 H 0.020 0.980 33 H 0.020 0.980 34 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.092 24.837 0.742 25.584 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.079 3.921 3 N -0.181 5.181 4 C 0.050 3.950 5 Cl 0.028 6.972 6 C -0.132 4.132 7 Cl 0.005 6.995 8 C -0.017 4.017 9 C -0.166 4.166 10 C 0.354 3.646 11 O -0.380 6.380 12 O -0.267 6.267 13 C -0.003 4.003 14 C -0.147 4.147 15 C -0.013 4.013 16 C -0.561 4.561 17 H 0.076 0.924 18 C -0.144 4.144 19 N -0.533 5.533 20 Si 0.723 3.277 21 H -0.206 1.206 22 H -0.212 1.212 23 H -0.198 1.198 24 H 0.113 0.887 25 H 0.098 0.902 26 H 0.128 0.872 27 H 0.192 0.808 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.080 0.920 31 H 0.080 0.920 32 H 0.038 0.962 33 H 0.038 0.962 34 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 5.353 25.565 0.777 26.131 hybrid contribution 1.213 -1.471 -0.048 1.907 sum 6.566 24.094 0.728 24.983 Atomic orbital electron populations 1.21215 0.85845 1.04941 1.05159 1.21585 0.98054 0.84991 0.87473 1.67227 1.06610 1.28979 1.15315 1.21861 0.89714 0.87696 0.95761 1.98450 1.76615 1.26377 1.95713 1.21519 0.87963 0.93616 1.10056 1.98422 1.05851 1.98509 1.96719 1.21962 0.93275 0.97771 0.88739 1.20128 0.93354 0.93043 1.10089 1.20451 0.85770 0.84408 0.73946 1.90821 1.14495 1.87697 1.44980 1.86534 1.42633 1.15199 1.82352 1.23637 0.94730 0.79370 1.02560 1.21794 0.98523 0.92440 1.01980 1.19053 0.95184 0.89288 0.97747 1.21156 0.93635 0.90842 1.50459 0.92417 1.25027 0.95084 0.99163 0.95157 1.69957 1.11066 1.22131 1.50149 0.86545 0.80717 0.82207 0.78266 1.20589 1.21166 1.19795 0.88705 0.90164 0.87236 0.80812 0.91066 0.91070 0.92016 0.92022 0.96182 0.96170 0.92838 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.09 8.87 36.00 0.32 -0.77 16 2 C 0.22 2.36 6.82 -82.16 -0.56 1.80 16 3 N -0.47 -5.20 10.23 -6.24 -0.06 -5.27 16 4 C 0.22 2.22 7.28 -17.30 -0.13 2.09 16 5 Cl 0.00 0.00 28.10 -51.86 -1.46 -1.46 16 6 C -0.10 -0.98 6.34 -39.38 -0.25 -1.23 16 7 Cl -0.02 -0.21 27.97 -51.86 -1.45 -1.66 16 8 C 0.01 0.08 9.53 -38.83 -0.37 -0.29 16 9 C -0.16 -1.83 5.89 -104.84 -0.62 -2.45 16 10 C 0.51 6.90 7.83 34.58 0.27 7.17 16 11 O -0.49 -7.31 13.16 -19.25 -0.25 -7.56 16 12 O -0.35 -5.15 9.57 -40.54 -0.39 -5.54 16 13 C 0.07 1.16 5.48 37.16 0.20 1.36 16 14 C -0.11 -2.12 5.53 -26.73 -0.15 -2.26 16 15 C 0.02 0.60 4.97 -27.88 -0.14 0.46 16 16 C -0.52 -14.29 9.11 -34.44 -0.31 -14.60 16 17 H 0.06 1.52 7.74 -52.49 -0.41 1.12 16 18 C 0.06 1.60 5.46 -17.82 -0.10 1.50 16 19 N -0.89 -26.25 13.29 55.43 0.74 -25.51 16 20 Si 0.89 21.12 29.54 -169.99 -5.02 16.10 16 21 H -0.28 -6.52 7.11 56.52 0.40 -6.11 16 22 H -0.29 -6.70 7.11 56.52 0.40 -6.30 16 23 H -0.27 -6.30 7.11 56.52 0.40 -5.90 16 24 H 0.09 0.85 8.14 -51.92 -0.42 0.43 16 25 H 0.08 0.64 8.14 -51.93 -0.42 0.22 16 26 H 0.11 1.15 5.86 -51.93 -0.30 0.85 16 27 H 0.17 1.51 7.72 -52.49 -0.40 1.10 16 28 H 0.07 1.18 8.14 -51.93 -0.42 0.76 16 29 H 0.07 1.18 8.14 -51.93 -0.42 0.75 16 30 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 31 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 32 H 0.02 0.52 8.14 -51.92 -0.42 0.09 16 33 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 34 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 LS Contribution 331.04 15.07 4.99 4.99 Total: -1.00 -29.25 331.04 -8.37 -37.62 By element: Atomic # 1 Polarization: -0.87 SS G_CDS: -3.63 Total: -4.50 kcal Atomic # 6 Polarization: -5.38 SS G_CDS: -1.83 Total: -7.21 kcal Atomic # 7 Polarization: -31.45 SS G_CDS: 0.67 Total: -30.77 kcal Atomic # 8 Polarization: -12.46 SS G_CDS: -0.64 Total: -13.10 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -5.02 Total: 16.10 kcal Atomic # 17 Polarization: -0.21 SS G_CDS: -2.91 Total: -3.12 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -29.25 -8.37 -37.62 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000805723220.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.219 kcal (2) G-P(sol) polarization free energy of solvation -29.247 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.466 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.615 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.835 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds