Wall clock time and date at job start Tue Mar 31 2020 11:41:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 109.47153 * 2 1 4 4 C 1.50697 * 109.47466 * 239.99773 * 2 1 3 5 5 H 1.07999 * 120.00055 * 240.00165 * 4 2 1 6 6 C 1.37878 * 119.99687 * 60.00188 * 4 2 1 7 7 N 1.31511 * 120.00458 * 359.97438 * 6 4 2 8 8 Si 1.86805 * 119.99926 * 180.02562 * 6 4 2 9 9 H 1.48500 * 109.47262 * 0.02562 * 8 6 4 10 10 H 1.48505 * 109.46882 * 119.99668 * 8 6 4 11 11 H 1.48493 * 109.47394 * 239.99732 * 8 6 4 12 12 N 1.46497 * 109.47188 * 119.99573 * 2 1 3 13 13 C 1.34777 * 120.00376 * 275.00479 * 12 2 1 14 14 O 1.21279 * 119.99824 * 359.97438 * 13 12 2 15 15 C 1.50699 * 120.00179 * 179.97438 * 13 12 2 16 16 H 1.09003 * 109.47494 * 305.00021 * 15 13 12 17 17 O 1.42899 * 109.47573 * 184.99601 * 15 13 12 18 18 C 1.50703 * 109.47240 * 64.99460 * 15 13 12 19 19 C 1.38271 * 119.97532 * 84.72662 * 18 15 13 20 20 C 1.38210 * 120.03296 * 179.72306 * 19 18 15 21 21 C 1.38347 * 120.00290 * 0.55519 * 20 19 18 22 22 Cl 1.73593 * 120.02122 * 179.74682 * 21 20 19 23 23 C 1.38445 * 119.95618 * 359.72103 * 21 20 19 24 24 Cl 1.73608 * 120.01636 * 180.02562 * 23 21 20 25 25 C 1.38206 * 119.98624 * 265.00242 * 18 15 13 26 26 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46832 * 60.00191 * 1 2 3 28 28 H 1.09004 * 109.47261 * 300.00172 * 1 2 3 29 29 H 0.96999 * 120.00480 * 179.97438 * 7 6 4 30 30 H 0.97006 * 119.99921 * 94.99902 * 12 2 1 31 31 H 0.96701 * 114.00071 * 300.00481 * 17 15 13 32 32 H 1.07995 * 119.98618 * 359.97438 * 19 18 15 33 33 H 1.08004 * 119.99858 * 180.24935 * 20 19 18 34 34 H 1.08000 * 119.99743 * 0.02562 * 25 18 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0324 -0.7104 -1.2304 5 1 2.6533 -1.5885 -1.1312 6 6 1.6993 -0.2393 -2.4827 7 7 0.9428 0.8296 -2.6034 8 14 2.3215 -1.1204 -4.0079 9 1 3.1456 -2.2877 -3.6037 10 1 1.1661 -1.5867 -4.8160 11 1 3.1467 -0.1875 -4.8164 12 7 2.0183 -0.6905 1.1962 13 6 2.1470 -0.0182 2.3572 14 8 1.8589 1.1587 2.4115 15 6 2.6488 -0.7286 3.5878 16 1 2.0274 -1.6030 3.7814 17 8 2.5871 0.1569 4.7076 18 6 4.0749 -1.1644 3.3699 19 6 5.1115 -0.2818 3.6116 20 6 6.4201 -0.6820 3.4177 21 6 6.6929 -1.9625 2.9705 22 17 8.3361 -2.4635 2.7204 23 6 5.6546 -2.8442 2.7230 24 17 5.9952 -4.4516 2.1624 25 6 4.3456 -2.4439 2.9231 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 0.5139 0.8900 29 1 0.7089 1.1612 -3.4844 30 1 2.2490 -1.6317 1.1527 31 1 3.1178 0.9587 4.6047 32 1 4.8988 0.7194 3.9561 33 1 7.2296 0.0065 3.6106 34 1 3.5352 -3.1311 2.7299 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000822868293.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:41:22 Heat of formation + Delta-G solvation = -82.696955 kcal Electronic energy + Delta-G solvation = -21807.189060 eV Core-core repulsion = 18177.460362 eV Total energy + Delta-G solvation = -3629.728698 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -40.39179 -38.86044 -36.98307 -36.71569 -36.15810 -34.78477 -32.68675 -31.69936 -31.00088 -29.15873 -26.69788 -25.30019 -23.28824 -22.51496 -21.14438 -19.66887 -18.27701 -17.83913 -16.54209 -16.47854 -15.99800 -15.46135 -15.15009 -14.77533 -14.41516 -14.13109 -14.07587 -13.55814 -13.26346 -12.79529 -12.48711 -12.27164 -12.06819 -12.00145 -11.71580 -11.50882 -11.32334 -11.15392 -11.10073 -11.00935 -10.86726 -10.74305 -10.36667 -10.29207 -9.40458 -9.13730 -9.09622 -8.68793 -8.60995 -8.05704 -6.17549 -4.27080 0.65054 0.83358 1.62704 1.98554 3.00470 3.19540 3.21098 3.29176 3.31869 3.81992 4.29015 4.33183 4.33877 4.39689 4.77126 4.87745 4.95662 5.15109 5.25971 5.28891 5.46807 5.62128 5.74645 6.04268 6.27005 6.74574 6.88219 7.06801 7.31346 7.35519 7.47907 7.62512 7.83193 8.07809 8.49770 8.68005 8.92744 9.40452 10.88384 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.011298 B = 0.004738 C = 0.003734 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2477.792658 B = 5908.133782 C = 7497.379931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.264 3.736 3 H 0.049 0.951 4 C -0.533 4.533 5 H 0.062 0.938 6 C 0.068 3.932 7 N -0.883 5.883 8 Si 0.900 3.100 9 H -0.272 1.272 10 H -0.282 1.282 11 H -0.282 1.282 12 N -0.698 5.698 13 C 0.478 3.522 14 O -0.542 6.542 15 C 0.130 3.870 16 H 0.132 0.868 17 O -0.530 6.530 18 C -0.092 4.092 19 C -0.088 4.088 20 C -0.093 4.093 21 C -0.030 4.030 22 Cl -0.051 7.051 23 C -0.024 4.024 24 Cl -0.047 7.047 25 C -0.086 4.086 26 H 0.027 0.973 27 H 0.091 0.909 28 H 0.015 0.985 29 H 0.264 0.736 30 H 0.388 0.612 31 H 0.382 0.618 32 H 0.139 0.861 33 H 0.145 0.855 34 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.533 -7.242 12.767 18.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.162 3.838 3 H 0.067 0.933 4 C -0.572 4.572 5 H 0.080 0.920 6 C -0.136 4.136 7 N -0.520 5.520 8 Si 0.727 3.273 9 H -0.196 1.196 10 H -0.208 1.208 11 H -0.208 1.208 12 N -0.347 5.347 13 C 0.260 3.740 14 O -0.420 6.420 15 C 0.067 3.933 16 H 0.150 0.850 17 O -0.336 6.336 18 C -0.094 4.094 19 C -0.107 4.107 20 C -0.111 4.111 21 C -0.058 4.058 22 Cl -0.022 7.022 23 C -0.052 4.052 24 Cl -0.018 7.018 25 C -0.105 4.105 26 H 0.046 0.954 27 H 0.110 0.890 28 H 0.034 0.966 29 H 0.074 0.926 30 H 0.221 0.779 31 H 0.231 0.769 32 H 0.157 0.843 33 H 0.163 0.837 34 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 10.015 -6.911 12.791 17.654 hybrid contribution 0.957 -0.707 -1.325 1.781 sum 10.972 -7.618 11.466 17.604 Atomic orbital electron populations 1.22088 0.98270 0.99250 1.01047 1.18803 0.91141 0.93970 0.79847 0.93312 1.21217 1.32486 1.13276 0.90195 0.91991 1.24871 0.94733 0.94918 0.99058 1.69902 1.35802 1.22446 1.23861 0.86418 0.78673 0.79625 0.82584 1.19638 1.20805 1.20836 1.46567 1.64101 1.13618 1.10394 1.20947 0.79644 0.88124 0.85241 1.90692 1.51228 1.15648 1.84466 1.20809 0.91683 0.93934 0.86854 0.85018 1.86598 1.73654 1.35219 1.38106 1.20381 0.96207 0.93739 0.99026 1.20960 0.91357 0.99887 0.98461 1.20986 0.97662 0.93683 0.98804 1.20788 0.85784 0.94832 1.04348 1.98388 1.17506 1.91230 1.95105 1.20675 0.93485 0.87890 1.03136 1.98398 1.95411 1.20490 1.87473 1.20845 0.94773 0.96117 0.98761 0.95352 0.89007 0.96591 0.92569 0.77913 0.76863 0.84287 0.83724 0.83493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.58 9.26 37.16 0.34 -3.24 16 2 C 0.26 6.48 2.56 -69.09 -0.18 6.30 16 3 H 0.05 1.39 7.58 -51.93 -0.39 1.00 16 4 C -0.53 -13.76 8.73 -34.44 -0.30 -14.06 16 5 H 0.06 1.54 7.74 -52.49 -0.41 1.13 16 6 C 0.07 1.79 5.30 -17.82 -0.09 1.69 16 7 N -0.88 -24.43 11.32 55.43 0.63 -23.80 16 8 Si 0.90 20.42 29.54 -169.99 -5.02 15.40 16 9 H -0.27 -6.06 7.11 56.52 0.40 -5.66 16 10 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 11 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 12 N -0.70 -13.63 5.02 -54.94 -0.28 -13.91 16 13 C 0.48 8.77 7.12 -10.99 -0.08 8.69 16 14 O -0.54 -12.12 15.99 -14.30 -0.23 -12.35 16 15 C 0.13 1.74 3.62 -29.03 -0.11 1.63 16 16 H 0.13 1.48 8.05 -51.93 -0.42 1.06 16 17 O -0.53 -7.09 12.79 -55.09 -0.70 -7.80 16 18 C -0.09 -1.10 4.95 -104.62 -0.52 -1.62 16 19 C -0.09 -0.97 9.33 -39.58 -0.37 -1.34 16 20 C -0.09 -0.97 9.83 -39.55 -0.39 -1.36 16 21 C -0.03 -0.35 6.32 -39.47 -0.25 -0.60 16 22 Cl -0.05 -0.56 27.96 -51.86 -1.45 -2.01 16 23 C -0.02 -0.29 6.32 -39.47 -0.25 -0.54 16 24 Cl -0.05 -0.54 27.96 -51.86 -1.45 -1.99 16 25 C -0.09 -0.98 9.30 -39.56 -0.37 -1.35 16 26 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 27 H 0.09 2.43 6.07 -51.93 -0.32 2.11 16 28 H 0.01 0.36 8.14 -51.93 -0.42 -0.06 16 29 H 0.26 6.94 8.31 -40.82 -0.34 6.60 16 30 H 0.39 6.54 8.37 -40.82 -0.34 6.20 16 31 H 0.38 4.26 7.14 45.56 0.33 4.59 16 32 H 0.14 1.27 6.62 -52.49 -0.35 0.92 16 33 H 0.15 1.18 8.06 -52.48 -0.42 0.75 16 34 H 0.15 1.39 8.06 -52.49 -0.42 0.97 16 LS Contribution 326.82 15.07 4.93 4.93 Total: -1.00 -30.64 326.82 -8.85 -39.49 By element: Atomic # 1 Polarization: 10.54 SS G_CDS: -2.72 Total: 7.82 kcal Atomic # 6 Polarization: -3.23 SS G_CDS: -2.55 Total: -5.78 kcal Atomic # 7 Polarization: -38.06 SS G_CDS: 0.35 Total: -37.71 kcal Atomic # 8 Polarization: -19.21 SS G_CDS: -0.93 Total: -20.14 kcal Atomic # 14 Polarization: 20.42 SS G_CDS: -5.02 Total: 15.40 kcal Atomic # 17 Polarization: -1.10 SS G_CDS: -2.90 Total: -4.00 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -30.64 -8.85 -39.49 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000822868293.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.203 kcal (2) G-P(sol) polarization free energy of solvation -30.640 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.843 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.697 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds