Wall clock time and date at job start Tue Mar 31 2020 12:13:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.52996 * 115.54564 * 2 1 4 4 C 1.50701 * 109.47259 * 294.39202 * 3 2 1 5 5 O 1.21302 * 120.00053 * 358.21875 * 4 3 2 6 6 N 1.34780 * 119.99856 * 178.21460 * 4 3 2 7 7 C 1.40591 * 119.99903 * 179.97438 * 6 4 3 8 8 C 1.40653 * 126.08294 * 359.97438 * 7 6 4 9 9 N 1.30900 * 108.39053 * 180.02562 * 8 7 6 10 10 N 1.40079 * 108.40681 * 359.97438 * 9 8 7 11 11 C 1.37326 * 126.07016 * 179.97438 * 10 9 8 12 12 H 1.07991 * 119.99870 * 180.02562 * 11 10 9 13 13 C 1.38985 * 120.00013 * 0.02562 * 11 10 9 14 14 N 1.31295 * 120.00157 * 359.97438 * 13 11 10 15 15 Si 1.86796 * 120.00118 * 180.02562 * 13 11 10 16 16 H 1.48499 * 109.47514 * 89.99576 * 15 13 11 17 17 H 1.48495 * 109.47318 * 209.99957 * 15 13 11 18 18 H 1.48504 * 109.46803 * 329.99895 * 15 13 11 19 19 C 1.35678 * 126.08516 * 180.02562 * 7 6 4 20 20 C 1.53000 * 117.50074 * 145.66973 * 2 1 3 21 21 C 1.52999 * 117.49843 * 214.33235 * 2 1 3 22 22 Cl 1.80301 * 117.49993 * 359.97438 * 21 2 1 23 23 Cl 1.80300 * 117.49780 * 144.99303 * 21 2 1 24 24 H 1.08999 * 109.47255 * 64.10491 * 1 2 3 25 25 H 1.08997 * 109.46639 * 184.10757 * 1 2 3 26 26 H 1.09001 * 109.46898 * 304.10105 * 1 2 3 27 27 H 1.09004 * 109.47190 * 174.39256 * 3 2 1 28 28 H 1.08996 * 109.47718 * 54.39716 * 3 2 1 29 29 H 0.96997 * 120.00284 * 0.02562 * 6 4 3 30 30 H 1.07997 * 125.80210 * 0.03291 * 8 7 6 31 31 H 0.97000 * 120.00062 * 180.02562 * 14 13 11 32 32 H 1.08004 * 126.24430 * 359.97438 * 19 7 6 33 33 H 1.08991 * 117.49770 * 215.00076 * 20 2 1 34 34 H 1.08997 * 117.49512 * 0.02759 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.1898 1.3804 0.0000 4 6 1.8771 2.0867 -1.2940 5 8 1.2207 1.5273 -2.1470 6 7 2.3266 3.3399 -1.5034 7 6 2.0353 3.9987 -2.7108 8 6 1.2903 3.4736 -3.7821 9 7 1.2330 4.3773 -4.7273 10 7 1.9356 5.5108 -4.2988 11 6 2.1051 6.6736 -5.0095 12 1 2.6684 7.4901 -4.5825 13 6 1.5517 6.7996 -6.2781 14 7 0.8673 5.8068 -6.7974 15 14 1.7828 8.3810 -7.2451 16 1 3.0175 8.2844 -8.0644 17 1 0.6133 8.5923 -8.1354 18 1 1.9014 9.5237 -6.3041 19 6 2.4235 5.2536 -3.0503 20 6 2.2366 -1.1207 0.7654 21 6 2.2365 -1.1207 -0.7654 22 17 1.2023 -2.3407 -1.5978 23 17 3.7828 -0.7135 -1.5984 24 1 -0.3634 0.4488 -0.9245 25 1 -0.3632 -1.0250 0.0736 26 1 -0.3633 0.5762 0.8510 27 1 3.2693 1.2672 0.1004 28 1 1.8068 1.9663 0.8355 29 1 2.8517 3.7872 -0.8214 30 1 0.8418 2.4918 -3.8185 31 1 0.4813 5.8946 -7.6830 32 1 3.0109 5.9265 -2.4432 33 1 3.1714 -0.8746 1.2688 34 1 1.6113 -1.8582 1.2685 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000822878322.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:13:44 Heat of formation + Delta-G solvation = 61.154112 kcal Electronic energy + Delta-G solvation = -21619.025386 eV Core-core repulsion = 18027.827290 eV Total energy + Delta-G solvation = -3591.198096 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.044 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.05619 -39.18070 -37.77007 -35.98918 -35.71616 -34.11752 -33.11013 -30.38695 -29.77471 -28.41692 -27.21836 -24.72815 -22.48101 -21.33602 -20.64581 -19.34851 -19.10693 -17.47972 -16.60765 -16.15437 -15.70993 -15.41153 -15.04204 -14.56334 -14.00986 -13.80094 -13.39789 -13.07122 -13.06318 -12.85537 -12.38596 -12.32816 -11.98134 -11.69351 -11.60622 -11.55062 -11.36741 -11.23044 -11.12555 -10.91520 -10.73390 -10.51677 -10.34024 -10.06266 -9.66578 -9.12202 -9.04232 -8.75043 -8.01223 -6.64656 -6.52260 -4.18993 1.22099 2.17173 2.88074 2.99044 3.06799 3.07686 3.11804 3.64367 3.71988 3.89430 3.98893 4.23224 4.47785 4.56557 4.77605 4.85355 5.05520 5.20724 5.29157 5.34384 5.42152 5.60644 5.72594 5.83649 6.27671 6.30786 6.50992 6.94785 7.00894 7.18309 7.29552 7.89949 8.23543 8.34191 8.68472 8.92687 9.42301 9.72171 10.43787 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.027656 B = 0.003030 C = 0.002967 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1012.180393 B = 9238.494403 C = 9435.770029 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.062 4.062 3 C -0.111 4.111 4 C 0.501 3.499 5 O -0.521 6.521 6 N -0.627 5.627 7 C -0.057 4.057 8 C -0.031 4.031 9 N -0.261 5.261 10 N -0.144 5.144 11 C -0.324 4.324 12 H 0.115 0.885 13 C 0.046 3.954 14 N -0.770 5.770 15 Si 0.934 3.066 16 H -0.271 1.271 17 H -0.276 1.276 18 H -0.264 1.264 19 C -0.085 4.085 20 C -0.146 4.146 21 C 0.018 3.982 22 Cl -0.094 7.094 23 Cl -0.092 7.092 24 H 0.090 0.910 25 H 0.063 0.937 26 H 0.066 0.934 27 H 0.097 0.903 28 H 0.104 0.896 29 H 0.395 0.605 30 H 0.176 0.824 31 H 0.274 0.726 32 H 0.144 0.856 33 H 0.118 0.882 34 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.356 -10.153 16.523 19.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C -0.064 4.064 3 C -0.151 4.151 4 C 0.287 3.713 5 O -0.397 6.397 6 N -0.269 5.269 7 C -0.163 4.163 8 C -0.207 4.207 9 N -0.092 5.092 10 N 0.088 4.912 11 C -0.456 4.456 12 H 0.133 0.867 13 C -0.171 4.171 14 N -0.397 5.397 15 Si 0.758 3.242 16 H -0.196 1.196 17 H -0.201 1.201 18 H -0.188 1.188 19 C -0.236 4.236 20 C -0.184 4.184 21 C -0.034 4.034 22 Cl -0.066 7.066 23 Cl -0.064 7.064 24 H 0.109 0.891 25 H 0.082 0.918 26 H 0.085 0.915 27 H 0.115 0.885 28 H 0.122 0.878 29 H 0.227 0.773 30 H 0.193 0.807 31 H 0.085 0.915 32 H 0.161 0.839 33 H 0.136 0.864 34 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 2.347 -10.416 14.377 17.908 hybrid contribution 0.971 0.670 0.646 1.345 sum 3.318 -9.746 15.023 18.212 Atomic orbital electron populations 1.21523 0.89629 1.02768 1.04250 1.21902 0.96859 0.89758 0.97852 1.21299 1.02155 0.93749 0.97899 1.20021 0.81239 0.81481 0.88599 1.90609 1.38832 1.65196 1.45046 1.42492 1.52994 1.14396 1.17061 1.17257 1.14397 0.94454 0.90146 1.24105 1.04087 1.00838 0.91670 1.78251 1.17780 0.92479 1.20710 1.44533 1.28530 1.10082 1.08037 1.19844 1.36099 0.90683 0.99012 0.86727 1.25624 0.95281 0.99033 0.97124 1.70219 1.24676 1.29602 1.15204 0.85845 0.78514 0.80369 0.79506 1.19629 1.20109 1.18850 1.21250 1.12634 0.97735 0.92018 1.24210 1.03712 1.00779 0.89699 1.26766 0.87797 0.98190 0.90621 1.98733 1.68288 1.58107 1.81514 1.98753 1.32791 1.93467 1.81420 0.89120 0.91829 0.91477 0.88510 0.87764 0.77258 0.80709 0.91519 0.83878 0.86353 0.86185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.35 8.89 37.16 0.33 -1.02 16 2 C -0.06 -0.66 1.60 -154.51 -0.25 -0.91 16 3 C -0.11 -1.18 5.02 -27.88 -0.14 -1.32 16 4 C 0.50 8.08 7.50 -10.98 -0.08 8.00 16 5 O -0.52 -10.33 11.62 5.54 0.06 -10.27 16 6 N -0.63 -10.69 5.47 -10.00 -0.05 -10.74 16 7 C -0.06 -1.30 6.90 -83.84 -0.58 -1.88 16 8 C -0.03 -0.83 10.85 -17.04 -0.18 -1.01 16 9 N -0.26 -7.66 10.40 30.80 0.32 -7.34 16 10 N -0.14 -3.98 3.74 -11.41 -0.04 -4.02 16 11 C -0.32 -8.66 10.25 -14.81 -0.15 -8.81 16 12 H 0.12 2.73 7.83 -52.49 -0.41 2.32 16 13 C 0.05 1.21 5.50 -17.50 -0.10 1.11 16 14 N -0.77 -21.78 11.81 55.49 0.66 -21.13 16 15 Si 0.93 19.11 29.55 -169.99 -5.02 14.08 16 16 H -0.27 -5.47 7.11 56.52 0.40 -5.06 16 17 H -0.28 -5.60 7.11 56.52 0.40 -5.20 16 18 H -0.26 -5.16 7.11 56.52 0.40 -4.76 16 19 C -0.09 -2.01 11.49 -16.40 -0.19 -2.20 16 20 C -0.15 -1.17 9.60 -26.69 -0.26 -1.42 16 21 C 0.02 0.21 3.55 -26.69 -0.09 0.12 16 22 Cl -0.09 -1.20 27.77 -51.86 -1.44 -2.64 16 23 Cl -0.09 -1.24 27.67 -51.86 -1.44 -2.67 16 24 H 0.09 1.28 6.62 -51.93 -0.34 0.94 16 25 H 0.06 0.62 7.20 -51.93 -0.37 0.25 16 26 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 27 H 0.10 0.90 7.27 -51.93 -0.38 0.52 16 28 H 0.10 0.82 8.14 -51.93 -0.42 0.40 16 29 H 0.39 5.11 8.83 -40.82 -0.36 4.75 16 30 H 0.18 4.59 5.92 -52.49 -0.31 4.27 16 31 H 0.27 7.10 8.31 -40.82 -0.34 6.76 16 32 H 0.14 2.81 8.06 -52.48 -0.42 2.39 16 33 H 0.12 0.73 8.14 -51.93 -0.42 0.31 16 34 H 0.12 0.77 8.14 -51.93 -0.42 0.35 16 LS Contribution 323.12 15.07 4.87 4.87 Total: -1.00 -33.60 323.12 -7.20 -40.80 By element: Atomic # 1 Polarization: 11.83 SS G_CDS: -3.43 Total: 8.41 kcal Atomic # 6 Polarization: -7.66 SS G_CDS: -1.69 Total: -9.35 kcal Atomic # 7 Polarization: -44.11 SS G_CDS: 0.88 Total: -43.23 kcal Atomic # 8 Polarization: -10.33 SS G_CDS: 0.06 Total: -10.27 kcal Atomic # 14 Polarization: 19.11 SS G_CDS: -5.02 Total: 14.08 kcal Atomic # 17 Polarization: -2.44 SS G_CDS: -2.88 Total: -5.31 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -33.60 -7.20 -40.80 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000822878322.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.956 kcal (2) G-P(sol) polarization free energy of solvation -33.599 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.357 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.203 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.802 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.154 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds