Wall clock time and date at job start Tue Mar 31 2020 11:54:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 C 1.46901 * 110.99609 * 2 1 4 4 C 1.50703 * 109.47180 * 66.04470 * 3 2 1 5 5 H 1.08002 * 119.99997 * 0.02562 * 4 3 2 6 6 C 1.37880 * 119.99804 * 179.97438 * 4 3 2 7 7 N 1.31511 * 120.00068 * 0.02562 * 6 4 3 8 8 Si 1.86805 * 119.99724 * 180.02562 * 6 4 3 9 9 H 1.48498 * 109.47076 * 0.02562 * 8 6 4 10 10 H 1.48494 * 109.47104 * 120.00399 * 8 6 4 11 11 H 1.48502 * 109.46809 * 240.00502 * 8 6 4 12 12 C 1.46903 * 110.99922 * 236.04828 * 2 1 3 13 13 H 1.08995 * 109.47028 * 62.96655 * 12 2 1 14 14 C 1.50692 * 109.46938 * 302.96374 * 12 2 1 15 15 O 1.20823 * 120.00293 * 331.86637 * 14 12 2 16 16 O 1.34234 * 119.99844 * 151.87334 * 14 12 2 17 17 C 1.50699 * 109.46745 * 182.96547 * 12 2 1 18 18 C 1.38218 * 119.98989 * 43.13422 * 17 12 2 19 19 C 1.38365 * 120.01707 * 179.97438 * 18 17 12 20 20 Cl 1.73593 * 120.00885 * 180.27908 * 19 18 17 21 21 C 1.38328 * 119.98236 * 0.02562 * 19 18 17 22 22 C 1.38336 * 119.97709 * 359.97438 * 21 19 18 23 23 Cl 1.73598 * 120.00650 * 180.02562 * 22 21 19 24 24 C 1.38221 * 119.98457 * 223.11536 * 17 12 2 25 25 H 1.09005 * 109.47019 * 178.47701 * 1 2 3 26 26 H 1.08993 * 109.47496 * 298.48058 * 1 2 3 27 27 H 1.09003 * 109.47521 * 58.48719 * 1 2 3 28 28 H 1.09001 * 109.47031 * 186.04700 * 3 2 1 29 29 H 1.09005 * 109.47508 * 306.04488 * 3 2 1 30 30 H 0.97004 * 119.99872 * 179.97438 * 7 6 4 31 31 H 0.96701 * 116.99806 * 180.02562 * 16 14 12 32 32 H 1.08001 * 119.99124 * 359.97438 * 18 17 12 33 33 H 1.08000 * 120.01382 * 179.97438 * 21 19 18 34 34 H 1.07997 * 119.99623 * 0.02562 * 24 17 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3715 0.0000 4 6 1.6367 2.0472 1.2984 5 1 1.0745 1.5112 2.0488 6 6 2.0274 3.3492 1.5289 7 7 2.7125 4.0016 0.6153 8 14 1.5835 4.1866 3.1387 9 1 0.8163 3.2439 3.9918 10 1 2.8254 4.5932 3.8439 11 1 0.7564 5.3880 2.8600 12 6 1.9954 -0.7660 -1.1376 13 1 1.6896 -0.2896 -2.0690 14 6 1.4537 -2.1714 -1.0907 15 8 1.1550 -2.6686 -0.0308 16 8 1.3031 -2.8709 -2.2264 17 6 3.5001 -0.8048 -1.0637 18 6 4.1267 -1.0340 0.1468 19 6 5.5081 -1.0703 0.2152 20 17 6.2947 -1.3653 1.7343 21 6 6.2622 -0.8767 -0.9282 22 6 5.6346 -0.6473 -2.1395 23 17 6.5802 -0.4049 -3.5750 24 6 4.2531 -0.6116 -2.2066 25 1 -0.3633 -1.0274 -0.0273 26 1 -0.3634 0.4900 0.9032 27 1 -0.3634 0.5371 -0.8761 28 1 3.0796 1.3445 -0.1083 29 1 1.5610 1.9274 -0.8309 30 1 2.9871 4.9178 0.7773 31 1 0.9517 -3.7682 -2.1459 32 1 3.5378 -1.1847 1.0395 33 1 7.3405 -0.9045 -0.8753 34 1 3.7630 -0.4325 -3.1522 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000830722646.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:54:38 Heat of formation + Delta-G solvation = -68.262562 kcal Electronic energy + Delta-G solvation = -22234.449181 eV Core-core repulsion = 18605.346405 eV Total energy + Delta-G solvation = -3629.102775 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.58171 -39.20394 -36.97066 -36.64328 -36.07100 -35.64264 -32.79753 -31.59316 -30.52206 -28.15692 -26.90941 -24.66331 -22.76084 -22.56572 -21.67289 -19.81356 -18.02104 -17.31430 -16.82670 -16.10725 -15.90152 -15.61060 -15.21645 -14.64795 -14.48211 -14.06724 -13.87581 -13.64400 -13.39540 -12.65902 -12.39631 -12.23889 -12.07423 -11.85982 -11.63878 -11.46872 -11.32182 -11.08022 -10.94749 -10.89339 -10.78722 -10.74685 -10.66946 -10.27536 -9.96752 -9.31360 -8.77600 -8.59882 -8.45964 -7.56309 -6.09024 -4.10540 1.05499 1.14636 1.87722 2.34999 2.37694 3.02363 3.28759 3.36842 3.41524 3.55522 4.37630 4.51161 4.72265 4.97382 5.12874 5.25270 5.28313 5.35588 5.41468 5.51046 5.62698 5.93421 6.05552 6.12276 6.23876 6.43830 6.53141 6.61822 6.68006 7.04602 7.12888 7.63023 7.82275 7.99410 8.06499 8.35168 8.96162 9.53843 11.01720 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.009685 B = 0.005531 C = 0.004652 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2890.317642 B = 5061.487333 C = 6017.438788 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 N -0.517 5.517 3 C 0.193 3.807 4 C -0.508 4.508 5 H 0.066 0.934 6 C 0.059 3.941 7 N -0.895 5.895 8 Si 0.897 3.103 9 H -0.271 1.271 10 H -0.283 1.283 11 H -0.285 1.285 12 C 0.136 3.864 13 H 0.077 0.923 14 C 0.484 3.516 15 O -0.487 6.487 16 O -0.520 6.520 17 C -0.051 4.051 18 C -0.053 4.053 19 C -0.027 4.027 20 Cl -0.060 7.060 21 C -0.099 4.099 22 C -0.028 4.028 23 Cl -0.065 7.065 24 C -0.088 4.088 25 H 0.051 0.949 26 H 0.085 0.915 27 H 0.018 0.982 28 H 0.039 0.961 29 H -0.004 1.004 30 H 0.262 0.738 31 H 0.406 0.594 32 H 0.156 0.844 33 H 0.141 0.859 34 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.139 -12.060 -7.311 14.698 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 N -0.244 5.244 3 C 0.069 3.931 4 C -0.547 4.547 5 H 0.084 0.916 6 C -0.143 4.143 7 N -0.534 5.534 8 Si 0.725 3.275 9 H -0.196 1.196 10 H -0.210 1.210 11 H -0.211 1.211 12 C 0.026 3.974 13 H 0.094 0.906 14 C 0.324 3.676 15 O -0.372 6.372 16 O -0.331 6.331 17 C -0.052 4.052 18 C -0.072 4.072 19 C -0.054 4.054 20 Cl -0.031 7.031 21 C -0.118 4.118 22 C -0.055 4.055 23 Cl -0.036 7.036 24 C -0.108 4.108 25 H 0.069 0.931 26 H 0.103 0.897 27 H 0.036 0.964 28 H 0.057 0.943 29 H 0.014 0.986 30 H 0.071 0.929 31 H 0.264 0.736 32 H 0.174 0.826 33 H 0.159 0.841 34 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.599 -11.856 -6.632 14.342 hybrid contribution -0.502 0.527 0.136 0.740 sum 4.097 -11.329 -6.496 13.687 Atomic orbital electron populations 1.22351 0.87440 0.99985 1.01917 1.62165 1.07959 1.18273 1.35979 1.19890 0.96046 0.79734 0.97382 1.21094 1.35268 0.96913 1.01402 0.91566 1.24950 0.95129 0.97263 0.96979 1.69959 1.37997 1.11454 1.33952 0.86448 0.78222 0.79323 0.83511 1.19571 1.20958 1.21104 1.19956 0.90974 0.88744 0.97741 0.90586 1.23309 0.74633 0.88417 0.81195 1.90708 1.45287 1.69966 1.31210 1.84556 1.78680 1.32289 1.37602 1.19082 0.93191 1.00298 0.92646 1.21202 0.92055 0.94651 0.99286 1.20659 0.92764 1.04760 0.87206 1.98371 1.80363 1.94272 1.30073 1.20848 1.00697 1.00556 0.89727 1.20479 0.91559 1.05548 0.87946 1.98363 1.72397 1.95378 1.37468 1.20968 0.91583 0.99032 0.99175 0.93076 0.89650 0.96378 0.94276 0.98631 0.92883 0.73555 0.82645 0.84079 0.84188 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.59 8.99 60.06 0.54 1.13 16 2 N -0.52 -10.52 3.77 -239.14 -0.90 -11.42 16 3 C 0.19 4.70 4.43 -4.97 -0.02 4.67 16 4 C -0.51 -13.63 8.54 -34.44 -0.29 -13.92 16 5 H 0.07 1.78 7.10 -52.49 -0.37 1.41 16 6 C 0.06 1.61 5.46 -17.82 -0.10 1.51 16 7 N -0.89 -25.67 13.29 55.43 0.74 -24.94 16 8 Si 0.90 21.23 29.54 -169.99 -5.02 16.21 16 9 H -0.27 -6.32 7.11 56.52 0.40 -5.92 16 10 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 11 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 12 C 0.14 2.31 2.18 -70.02 -0.15 2.15 16 13 H 0.08 1.21 7.97 -51.93 -0.41 0.80 16 14 C 0.48 7.47 6.34 36.00 0.23 7.70 16 15 O -0.49 -8.72 16.15 -18.75 -0.30 -9.02 16 16 O -0.52 -6.02 13.42 -39.27 -0.53 -6.55 16 17 C -0.05 -0.84 3.51 -104.64 -0.37 -1.21 16 18 C -0.05 -0.92 8.39 -39.54 -0.33 -1.25 16 19 C -0.03 -0.42 6.32 -39.50 -0.25 -0.67 16 20 Cl -0.06 -0.87 28.96 -51.86 -1.50 -2.38 16 21 C -0.10 -1.39 9.62 -39.51 -0.38 -1.77 16 22 C -0.03 -0.40 6.32 -39.50 -0.25 -0.65 16 23 Cl -0.06 -0.80 28.96 -51.86 -1.50 -2.30 16 24 C -0.09 -1.29 9.45 -39.54 -0.37 -1.67 16 25 H 0.05 0.89 6.04 -51.93 -0.31 0.57 16 26 H 0.08 1.71 6.90 -51.93 -0.36 1.35 16 27 H 0.02 0.32 8.13 -51.93 -0.42 -0.10 16 28 H 0.04 1.01 6.31 -51.93 -0.33 0.68 16 29 H 0.00 -0.11 8.11 -51.93 -0.42 -0.53 16 30 H 0.26 7.14 8.31 -40.82 -0.34 6.80 16 31 H 0.41 2.81 9.10 45.56 0.41 3.23 16 32 H 0.16 2.93 7.82 -52.49 -0.41 2.52 16 33 H 0.14 1.68 8.06 -52.49 -0.42 1.26 16 34 H 0.14 1.77 8.01 -52.49 -0.42 1.35 16 LS Contribution 326.80 15.07 4.92 4.92 Total: -1.00 -30.16 326.80 -8.45 -38.61 By element: Atomic # 1 Polarization: 3.43 SS G_CDS: -2.60 Total: 0.83 kcal Atomic # 6 Polarization: -2.21 SS G_CDS: -1.75 Total: -3.96 kcal Atomic # 7 Polarization: -36.19 SS G_CDS: -0.16 Total: -36.36 kcal Atomic # 8 Polarization: -14.74 SS G_CDS: -0.83 Total: -15.57 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -5.02 Total: 16.21 kcal Atomic # 17 Polarization: -1.67 SS G_CDS: -3.00 Total: -4.68 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -30.16 -8.45 -38.61 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000830722646.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.657 kcal (2) G-P(sol) polarization free energy of solvation -30.159 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.446 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.605 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.263 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds