Wall clock time and date at job start Tue Mar 31 2020 11:54:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46908 * 1 3 3 C 1.46905 * 110.99777 * 2 1 4 4 C 1.50696 * 109.46531 * 66.05345 * 3 2 1 5 5 H 1.08002 * 120.00357 * 359.97438 * 4 3 2 6 6 C 1.37879 * 119.99672 * 179.97438 * 4 3 2 7 7 N 1.31519 * 120.00156 * 359.97438 * 6 4 3 8 8 Si 1.86800 * 120.00162 * 179.97438 * 6 4 3 9 9 H 1.48499 * 109.47347 * 59.99476 * 8 6 4 10 10 H 1.48494 * 109.47325 * 179.97438 * 8 6 4 11 11 H 1.48501 * 109.46603 * 299.99544 * 8 6 4 12 12 C 1.46905 * 110.99586 * 236.05183 * 2 1 3 13 13 H 1.09005 * 109.47461 * 63.95367 * 12 2 1 14 14 C 1.50696 * 109.46823 * 183.95343 * 12 2 1 15 15 O 1.20828 * 120.00365 * 359.97438 * 14 12 2 16 16 O 1.34233 * 120.00235 * 180.02562 * 14 12 2 17 17 C 1.50694 * 109.47243 * 303.95078 * 12 2 1 18 18 C 1.38244 * 119.99348 * 340.00613 * 17 12 2 19 19 C 1.38198 * 120.02645 * 179.97438 * 18 17 12 20 20 C 1.38380 * 120.01507 * 0.02562 * 19 18 17 21 21 Cl 1.73603 * 120.01071 * 180.02562 * 20 19 18 22 22 C 1.38315 * 119.98694 * 0.02562 * 20 19 18 23 23 C 1.38336 * 119.99530 * 160.04307 * 17 12 2 24 24 Cl 1.73607 * 120.00658 * 0.02562 * 23 17 12 25 25 H 1.08996 * 109.46729 * 183.94726 * 1 2 3 26 26 H 1.09004 * 109.46828 * 303.95075 * 1 2 3 27 27 H 1.09000 * 109.47109 * 63.94820 * 1 2 3 28 28 H 1.09000 * 109.46411 * 186.04827 * 3 2 1 29 29 H 1.08994 * 109.47289 * 306.04858 * 3 2 1 30 30 H 0.96998 * 119.99840 * 180.02562 * 7 6 4 31 31 H 0.96695 * 117.00592 * 179.97438 * 16 14 12 32 32 H 1.08000 * 119.98475 * 0.02562 * 18 17 12 33 33 H 1.08002 * 119.99688 * 180.02562 * 19 18 17 34 34 H 1.07996 * 120.01293 * 179.73135 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.6370 2.0470 1.2985 5 1 1.0741 1.5112 2.0486 6 6 2.0277 3.3490 1.5291 7 7 2.7137 4.0012 0.6159 8 14 1.5829 4.1867 3.1384 9 1 2.1736 3.4290 4.2707 10 1 2.1161 5.5726 3.1390 11 1 0.1056 4.2241 3.2849 12 6 1.9954 -0.7659 -1.1377 13 1 1.7044 -0.2797 -2.0689 14 6 3.4987 -0.8254 -1.0507 15 8 4.0728 -0.2849 -0.1352 16 8 4.2002 -1.4781 -1.9908 17 6 1.4347 -2.1642 -1.1045 18 6 0.9189 -2.6741 0.0724 19 6 0.4039 -3.9562 0.1036 20 6 0.4048 -4.7306 -1.0433 21 17 -0.2427 -6.3409 -1.0042 22 6 0.9217 -4.2214 -2.2208 23 6 1.4368 -2.9376 -2.2514 24 17 2.0860 -2.2977 -3.7289 25 1 -0.3632 -1.0252 0.0707 26 1 -0.3633 0.5740 0.8525 27 1 -0.3633 0.4513 -0.9232 28 1 3.0798 1.3444 -0.1083 29 1 1.5611 1.9274 -0.8308 30 1 2.9888 4.9171 0.7783 31 1 5.1621 -1.4886 -1.8927 32 1 0.9176 -2.0700 0.9677 33 1 0.0007 -4.3540 1.0232 34 1 0.9265 -4.8269 -3.1151 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000830723550.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:54:41 Heat of formation + Delta-G solvation = -51.969464 kcal Electronic energy + Delta-G solvation = -22299.569717 eV Core-core repulsion = 18671.173464 eV Total energy + Delta-G solvation = -3628.396254 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -40.52663 -39.23206 -37.06631 -36.69431 -36.18638 -35.37222 -32.84258 -31.34258 -31.04578 -27.90260 -27.19087 -24.24583 -23.04987 -22.62344 -21.47206 -19.87051 -17.80612 -17.44468 -16.54348 -16.39655 -16.12774 -15.60474 -14.97834 -14.59733 -14.21127 -14.11455 -13.95348 -13.73689 -13.34100 -12.73211 -12.56038 -12.27625 -12.11657 -11.86600 -11.73475 -11.46981 -11.30773 -11.12549 -11.01360 -10.85104 -10.82567 -10.66037 -10.50902 -10.09915 -9.71688 -9.17939 -8.95503 -8.67493 -8.36964 -7.52302 -6.00070 -4.00064 0.79224 0.99531 1.71232 2.19449 2.65970 3.15296 3.34845 3.39177 3.41258 3.47309 4.35862 4.52935 4.59762 4.72094 4.90230 5.15243 5.23492 5.36595 5.50650 5.65892 5.69653 5.77072 5.91656 6.00867 6.14602 6.23040 6.48899 6.59958 6.84090 7.16846 7.22295 7.73206 8.01125 8.09399 8.34232 8.49022 9.04107 9.61875 11.11453 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.017850 B = 0.004122 C = 0.003604 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1568.269245 B = 6791.235389 C = 7767.692425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.520 5.520 3 C 0.178 3.822 4 C -0.502 4.502 5 H 0.063 0.937 6 C 0.056 3.944 7 N -0.898 5.898 8 Si 0.899 3.101 9 H -0.276 1.276 10 H -0.288 1.288 11 H -0.278 1.278 12 C 0.132 3.868 13 H 0.084 0.916 14 C 0.479 3.521 15 O -0.465 6.465 16 O -0.515 6.515 17 C -0.067 4.067 18 C -0.061 4.061 19 C -0.115 4.115 20 C -0.022 4.022 21 Cl -0.067 7.067 22 C -0.112 4.112 23 C -0.008 4.008 24 Cl -0.043 7.043 25 H 0.057 0.943 26 H 0.086 0.914 27 H 0.018 0.982 28 H 0.062 0.938 29 H -0.011 1.011 30 H 0.261 0.739 31 H 0.403 0.597 32 H 0.164 0.836 33 H 0.141 0.859 34 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.723 -17.967 -7.140 19.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.247 5.247 3 C 0.054 3.946 4 C -0.540 4.540 5 H 0.081 0.919 6 C -0.145 4.145 7 N -0.538 5.538 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.214 1.214 11 H -0.203 1.203 12 C 0.022 3.978 13 H 0.101 0.899 14 C 0.318 3.682 15 O -0.348 6.348 16 O -0.327 6.327 17 C -0.069 4.069 18 C -0.080 4.080 19 C -0.134 4.134 20 C -0.049 4.049 21 Cl -0.038 7.038 22 C -0.131 4.131 23 C -0.035 4.035 24 Cl -0.014 7.014 25 H 0.075 0.925 26 H 0.105 0.895 27 H 0.036 0.964 28 H 0.080 0.920 29 H 0.006 0.994 30 H 0.071 0.929 31 H 0.261 0.739 32 H 0.182 0.818 33 H 0.158 0.842 34 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -3.731 -17.915 -6.650 19.470 hybrid contribution 0.191 0.901 -0.049 0.922 sum -3.540 -17.014 -6.699 18.625 Atomic orbital electron populations 1.22551 0.87456 1.00596 1.01697 1.62106 1.07340 1.19025 1.36180 1.20157 0.97801 0.79648 0.96972 1.20981 1.34828 0.96789 1.01429 0.91912 1.24952 0.95308 0.97346 0.96925 1.69949 1.38212 1.11482 1.34128 0.86553 0.78553 0.78354 0.83876 1.20167 1.21408 1.20325 1.19930 0.87839 0.92324 0.97711 0.89872 1.22880 0.90477 0.75472 0.79392 1.90792 1.71047 1.40143 1.32840 1.84608 1.25450 1.70911 1.51742 1.19530 0.99837 0.95050 0.92489 1.21363 0.94029 0.93898 0.98673 1.21204 1.00789 0.93883 0.97530 1.20783 1.01509 0.87413 0.95195 1.98374 1.84809 1.21836 1.98761 1.20767 1.00104 0.94257 0.98018 1.20622 1.00382 0.93973 0.88557 1.98392 1.84282 1.86149 1.32565 0.92491 0.89499 0.96383 0.92039 0.99353 0.92915 0.73908 0.81830 0.84155 0.83970 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.44 8.51 60.07 0.51 0.95 16 2 N -0.52 -10.69 3.59 -239.13 -0.86 -11.54 16 3 C 0.18 4.61 4.32 -4.98 -0.02 4.59 16 4 C -0.50 -13.98 8.46 -34.44 -0.29 -14.27 16 5 H 0.06 1.70 7.12 -52.49 -0.37 1.32 16 6 C 0.06 1.59 5.46 -17.82 -0.10 1.50 16 7 N -0.90 -26.93 13.29 55.43 0.74 -26.19 16 8 Si 0.90 21.69 29.54 -169.99 -5.02 16.67 16 9 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 10 H -0.29 -6.92 7.11 56.52 0.40 -6.52 16 11 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 12 C 0.13 2.32 1.69 -70.02 -0.12 2.20 16 13 H 0.08 1.47 7.36 -51.93 -0.38 1.09 16 14 C 0.48 8.70 7.26 36.00 0.26 8.96 16 15 O -0.46 -10.43 14.64 -18.75 -0.27 -10.70 16 16 O -0.52 -7.12 11.17 -39.26 -0.44 -7.56 16 17 C -0.07 -0.98 4.44 -104.59 -0.46 -1.44 16 18 C -0.06 -0.82 7.25 -39.59 -0.29 -1.11 16 19 C -0.12 -1.28 9.83 -39.54 -0.39 -1.67 16 20 C -0.02 -0.24 6.32 -39.50 -0.25 -0.49 16 21 Cl -0.07 -0.64 28.96 -51.86 -1.50 -2.15 16 22 C -0.11 -1.25 9.62 -39.51 -0.38 -1.63 16 23 C -0.01 -0.10 6.14 -39.50 -0.24 -0.34 16 24 Cl -0.04 -0.54 25.57 -51.86 -1.33 -1.87 16 25 H 0.06 0.84 4.97 -51.93 -0.26 0.58 16 26 H 0.09 1.65 6.76 -51.93 -0.35 1.30 16 27 H 0.02 0.31 8.14 -51.93 -0.42 -0.11 16 28 H 0.06 1.76 5.21 -51.93 -0.27 1.49 16 29 H -0.01 -0.31 8.12 -51.93 -0.42 -0.73 16 30 H 0.26 7.43 8.31 -40.82 -0.34 7.09 16 31 H 0.40 3.90 9.10 45.56 0.41 4.32 16 32 H 0.16 2.35 6.41 -52.49 -0.34 2.01 16 33 H 0.14 1.27 8.06 -52.49 -0.42 0.85 16 34 H 0.14 1.33 8.06 -52.49 -0.42 0.91 16 LS Contribution 314.97 15.07 4.75 4.75 Total: -1.00 -31.99 314.97 -8.09 -40.07 By element: Atomic # 1 Polarization: 3.66 SS G_CDS: -2.38 Total: 1.28 kcal Atomic # 6 Polarization: -0.99 SS G_CDS: -1.77 Total: -2.76 kcal Atomic # 7 Polarization: -37.61 SS G_CDS: -0.12 Total: -37.74 kcal Atomic # 8 Polarization: -17.55 SS G_CDS: -0.71 Total: -18.26 kcal Atomic # 14 Polarization: 21.69 SS G_CDS: -5.02 Total: 16.67 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -2.83 Total: -4.01 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -31.99 -8.09 -40.07 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000830723550.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.895 kcal (2) G-P(sol) polarization free energy of solvation -31.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.883 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.074 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds