Wall clock time and date at job start Tue Mar 31 2020 11:40:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09005 * 109.47121 * 2 1 4 4 C 1.50696 * 109.47278 * 239.99507 * 2 1 3 5 5 H 1.08006 * 120.00042 * 239.99960 * 4 2 1 6 6 C 1.37875 * 119.99941 * 60.00083 * 4 2 1 7 7 N 1.31511 * 120.00279 * 359.97438 * 6 4 2 8 8 Si 1.86800 * 119.99927 * 180.02562 * 6 4 2 9 9 H 1.48502 * 109.47046 * 359.97438 * 8 6 4 10 10 H 1.48504 * 109.47343 * 119.99793 * 8 6 4 11 11 H 1.48496 * 109.46987 * 239.99675 * 8 6 4 12 12 N 1.46501 * 109.47350 * 119.99301 * 2 1 3 13 13 C 1.46505 * 119.99866 * 60.00147 * 12 2 1 14 14 C 1.34781 * 120.00227 * 240.00296 * 12 2 1 15 15 O 1.21587 * 119.99876 * 4.82409 * 14 12 2 16 16 C 1.47541 * 120.00055 * 184.81976 * 14 12 2 17 17 C 1.39734 * 120.17884 * 314.25958 * 16 14 12 18 18 C 1.37879 * 119.91236 * 179.97438 * 17 16 14 19 19 Cl 1.73603 * 119.85432 * 179.97438 * 18 17 16 20 20 C 1.38639 * 120.28711 * 0.02676 * 18 17 16 21 21 C 1.38139 * 120.36573 * 359.97153 * 20 18 17 22 22 Cl 1.73596 * 119.96148 * 179.97438 * 21 20 18 23 23 C 1.38814 * 120.07321 * 359.74894 * 21 20 18 24 24 O 1.35692 * 120.13958 * 180.24808 * 23 21 20 25 25 H 1.09005 * 109.47298 * 300.00437 * 1 2 3 26 26 H 1.08998 * 109.47563 * 60.00698 * 1 2 3 27 27 H 1.09005 * 109.47056 * 180.02562 * 1 2 3 28 28 H 0.97000 * 120.00436 * 180.02562 * 7 6 4 29 29 H 1.08998 * 109.47000 * 275.23801 * 13 12 2 30 30 H 1.09005 * 109.46785 * 155.24276 * 13 12 2 31 31 H 1.08998 * 109.46902 * 35.24101 * 13 12 2 32 32 H 1.08000 * 120.04355 * 359.95496 * 17 16 14 33 33 H 1.07997 * 119.82093 * 179.97438 * 20 18 17 34 34 H 0.96693 * 114.00407 * 270.27910 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7105 -1.2304 5 1 2.6533 -1.5886 -1.1312 6 6 1.6993 -0.2395 -2.4826 7 7 0.9428 0.8294 -2.6035 8 14 2.3214 -1.1207 -4.0078 9 1 3.1465 -2.2873 -3.6035 10 1 1.1661 -1.5871 -4.8159 11 1 3.1466 -0.1877 -4.8164 12 7 2.0183 -0.6905 1.1962 13 6 1.6645 -2.0931 1.4282 14 6 2.7932 -0.0353 2.0834 15 8 3.0148 1.1512 1.9372 16 6 3.3725 -0.7580 3.2319 17 6 2.5797 -1.6247 3.9888 18 6 3.1268 -2.2977 5.0606 19 17 2.1403 -3.3736 6.0003 20 6 4.4610 -2.1180 5.3918 21 6 5.2554 -1.2640 4.6516 22 17 6.9245 -1.0464 5.0760 23 6 4.7216 -0.5834 3.5659 24 8 5.5020 0.2519 2.8348 25 1 -0.3634 0.5139 0.8900 26 1 -0.3634 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 0.7081 1.1606 -3.4845 29 1 0.6919 -2.1462 1.9175 30 1 2.4175 -2.5572 2.0652 31 1 1.6207 -2.6192 0.4746 32 1 1.5397 -1.7671 3.7347 33 1 4.8817 -2.6486 6.2331 34 1 5.5096 1.1642 3.1552 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000931941272.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:40:19 Heat of formation + Delta-G solvation = -56.489673 kcal Electronic energy + Delta-G solvation = -22116.466776 eV Core-core repulsion = 18487.874512 eV Total energy + Delta-G solvation = -3628.592265 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.57101 -38.54592 -37.42931 -36.75014 -36.16957 -35.38898 -33.07812 -31.45914 -29.82289 -29.13626 -26.38106 -25.27604 -24.22308 -22.92848 -21.29861 -19.22253 -18.35819 -17.30123 -16.72622 -16.49299 -15.89367 -15.73269 -15.20501 -14.78278 -14.38899 -14.24998 -13.70919 -13.24704 -13.04383 -12.83368 -12.57345 -12.47102 -12.21846 -11.79414 -11.54726 -11.48923 -11.22044 -11.11405 -11.03321 -10.85789 -10.84624 -10.74908 -10.29341 -10.20758 -9.35494 -9.22712 -9.06097 -8.76126 -8.47200 -7.72036 -6.11394 -4.19474 0.53863 0.64389 1.54725 1.99170 2.80333 3.24604 3.32073 3.34490 3.42642 3.75134 3.93787 4.35795 4.49235 4.63910 4.79594 5.06974 5.18565 5.21985 5.45281 5.61167 5.69665 5.80880 5.90293 6.05323 6.30307 6.69446 6.76336 6.98922 7.29171 7.44265 7.51302 7.66123 7.95091 8.12035 8.38138 8.71389 8.89668 9.47061 10.94053 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.015596 B = 0.004107 C = 0.003619 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1794.951064 B = 6816.396123 C = 7734.592600 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C 0.259 3.741 3 H 0.065 0.935 4 C -0.527 4.527 5 H 0.061 0.939 6 C 0.066 3.934 7 N -0.887 5.887 8 Si 0.899 3.101 9 H -0.273 1.273 10 H -0.283 1.283 11 H -0.283 1.283 12 N -0.579 5.579 13 C 0.073 3.927 14 C 0.554 3.446 15 O -0.538 6.538 16 C -0.119 4.119 17 C -0.063 4.063 18 C -0.044 4.044 19 Cl -0.055 7.055 20 C -0.076 4.076 21 C -0.063 4.063 22 Cl -0.044 7.044 23 C 0.174 3.826 24 O -0.471 6.471 25 H 0.012 0.988 26 H 0.095 0.905 27 H 0.030 0.970 28 H 0.263 0.737 29 H 0.049 0.951 30 H 0.059 0.941 31 H 0.083 0.917 32 H 0.153 0.847 33 H 0.149 0.851 34 H 0.404 0.596 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.644 -7.067 17.231 19.194 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C 0.159 3.841 3 H 0.083 0.917 4 C -0.566 4.566 5 H 0.079 0.921 6 C -0.137 4.137 7 N -0.525 5.525 8 Si 0.727 3.273 9 H -0.198 1.198 10 H -0.209 1.209 11 H -0.209 1.209 12 N -0.309 5.309 13 C -0.071 4.071 14 C 0.340 3.660 15 O -0.417 6.417 16 C -0.123 4.123 17 C -0.082 4.082 18 C -0.071 4.071 19 Cl -0.026 7.026 20 C -0.096 4.096 21 C -0.090 4.090 22 Cl -0.015 7.015 23 C 0.126 3.874 24 O -0.282 6.282 25 H 0.031 0.969 26 H 0.113 0.887 27 H 0.050 0.950 28 H 0.073 0.927 29 H 0.067 0.933 30 H 0.078 0.922 31 H 0.101 0.899 32 H 0.170 0.830 33 H 0.167 0.833 34 H 0.263 0.737 Dipole moment (debyes) X Y Z Total from point charges 4.827 -6.881 16.742 18.734 hybrid contribution 0.272 -0.297 -0.471 0.620 sum 5.099 -7.177 16.271 18.500 Atomic orbital electron populations 1.22087 0.97891 0.99539 1.00978 1.19028 0.91065 0.94521 0.79468 0.91686 1.21328 1.31926 1.13143 0.90159 0.92094 1.24877 0.94858 0.94953 0.98979 1.69881 1.36256 1.22589 1.23755 0.86427 0.78611 0.79637 0.82665 1.19768 1.20896 1.20854 1.48197 1.47852 1.11675 1.23149 1.21918 0.98838 0.83403 1.02931 1.17710 0.79661 0.86752 0.81885 1.90748 1.61072 1.14671 1.75159 1.20584 0.92991 0.99765 0.98975 1.21432 1.01362 0.93074 0.92338 1.20530 0.91902 0.98425 0.96205 1.98387 1.69468 1.62980 1.71752 1.20864 0.91474 0.97343 0.99905 1.21077 0.87718 1.02972 0.97259 1.98384 1.14369 1.96282 1.92486 1.18136 0.87853 0.92978 0.88395 1.84738 1.66041 1.23411 1.54045 0.96899 0.88656 0.95039 0.92667 0.93252 0.92228 0.89857 0.82960 0.83330 0.73669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.41 8.97 37.16 0.33 -3.08 16 2 C 0.26 6.47 2.63 -69.09 -0.18 6.29 16 3 H 0.07 1.88 6.91 -51.93 -0.36 1.52 16 4 C -0.53 -14.03 8.03 -34.44 -0.28 -14.31 16 5 H 0.06 1.61 7.25 -52.48 -0.38 1.23 16 6 C 0.07 1.77 5.30 -17.82 -0.09 1.68 16 7 N -0.89 -24.69 11.32 55.43 0.63 -24.06 16 8 Si 0.90 20.87 29.54 -169.99 -5.02 15.85 16 9 H -0.27 -6.28 7.11 56.52 0.40 -5.87 16 10 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 11 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 12 N -0.58 -12.11 2.75 -176.49 -0.49 -12.59 16 13 C 0.07 1.20 8.05 59.85 0.48 1.68 16 14 C 0.55 11.30 7.02 -12.47 -0.09 11.21 16 15 O -0.54 -12.69 15.74 -6.81 -0.11 -12.79 16 16 C -0.12 -1.87 5.05 -104.85 -0.53 -2.40 16 17 C -0.06 -0.80 7.24 -39.15 -0.28 -1.08 16 18 C -0.04 -0.48 6.31 -39.56 -0.25 -0.73 16 19 Cl -0.05 -0.53 28.94 -51.86 -1.50 -2.03 16 20 C -0.08 -0.79 9.59 -39.47 -0.38 -1.17 16 21 C -0.06 -0.75 6.33 -39.40 -0.25 -1.00 16 22 Cl -0.04 -0.48 28.50 -51.86 -1.48 -1.96 16 23 C 0.17 2.55 6.68 -38.68 -0.26 2.29 16 24 O -0.47 -7.20 11.91 -30.88 -0.37 -7.57 16 25 H 0.01 0.26 8.14 -51.93 -0.42 -0.16 16 26 H 0.09 2.45 6.07 -51.93 -0.32 2.13 16 27 H 0.03 0.67 7.67 -51.93 -0.40 0.27 16 28 H 0.26 6.96 8.31 -40.82 -0.34 6.62 16 29 H 0.05 0.70 7.59 -51.93 -0.39 0.30 16 30 H 0.06 0.85 5.34 -51.93 -0.28 0.57 16 31 H 0.08 1.46 6.96 -51.93 -0.36 1.10 16 32 H 0.15 1.80 6.28 -52.49 -0.33 1.48 16 33 H 0.15 1.20 8.06 -52.49 -0.42 0.78 16 34 H 0.40 4.79 9.06 45.56 0.41 5.20 16 LS Contribution 318.88 15.07 4.81 4.81 Total: -1.00 -30.36 318.88 -7.68 -38.05 By element: Atomic # 1 Polarization: 5.30 SS G_CDS: -2.38 Total: 2.92 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -1.77 Total: -0.62 kcal Atomic # 7 Polarization: -36.79 SS G_CDS: 0.14 Total: -36.65 kcal Atomic # 8 Polarization: -19.89 SS G_CDS: -0.48 Total: -20.36 kcal Atomic # 14 Polarization: 20.87 SS G_CDS: -5.02 Total: 15.85 kcal Atomic # 17 Polarization: -1.01 SS G_CDS: -2.98 Total: -3.99 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -30.36 -7.68 -38.05 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000931941272.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.441 kcal (2) G-P(sol) polarization free energy of solvation -30.364 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.805 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.684 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.048 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds