Wall clock time and date at job start Tue Mar 31 2020 11:51:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 O 1.21303 * 120.00144 * 2 1 4 4 N 1.34778 * 120.00304 * 179.97438 * 2 1 3 5 5 C 1.40107 * 120.00234 * 184.95402 * 4 2 1 6 6 C 1.38857 * 120.00956 * 34.43623 * 5 4 2 7 7 C 1.38096 * 120.00482 * 179.97438 * 6 5 4 8 8 C 1.38693 * 120.02803 * 0.02562 * 7 6 5 9 9 O 1.35992 * 119.99106 * 179.97438 * 8 7 6 10 10 C 1.42901 * 116.99906 * 4.67709 * 9 8 7 11 11 H 1.08994 * 109.47321 * 23.28161 * 10 9 8 12 12 C 1.50700 * 109.47038 * 143.28160 * 10 9 8 13 13 H 1.07993 * 120.00417 * 5.35439 * 12 10 9 14 14 C 1.37885 * 119.99782 * 185.35635 * 12 10 9 15 15 N 1.31518 * 119.99533 * 185.30178 * 14 12 10 16 16 Si 1.86791 * 120.00109 * 5.30674 * 14 12 10 17 17 H 1.48498 * 109.47119 * 269.99531 * 16 14 12 18 18 H 1.48506 * 109.47543 * 29.99730 * 16 14 12 19 19 H 1.48505 * 109.47546 * 149.99711 * 16 14 12 20 20 C 1.53001 * 109.47211 * 263.27893 * 10 9 8 21 21 Cl 1.80303 * 109.46992 * 64.50904 * 20 10 9 22 22 C 1.38807 * 120.02388 * 0.25190 * 8 7 6 23 23 Cl 1.73605 * 120.00528 * 179.70152 * 22 8 7 24 24 C 1.38199 * 119.99070 * 359.45446 * 22 8 7 25 25 H 1.09005 * 109.47173 * 240.00116 * 1 2 3 26 26 H 1.09005 * 109.47361 * 0.02562 * 1 2 3 27 27 H 1.08997 * 109.47154 * 120.00259 * 1 2 3 28 28 H 0.97001 * 119.99632 * 4.95438 * 4 2 1 29 29 H 1.08000 * 120.00133 * 359.96225 * 6 5 4 30 30 H 1.08004 * 119.98331 * 180.02562 * 7 6 5 31 31 H 0.97001 * 120.00624 * 354.99698 * 15 14 12 32 32 H 1.09005 * 109.47422 * 184.50273 * 20 10 9 33 33 H 1.08994 * 109.47360 * 304.50718 * 20 10 9 34 34 H 1.08000 * 120.01689 * 180.24869 * 24 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 8 2.1135 1.0505 0.0000 4 7 2.1809 -1.1672 0.0005 5 6 3.5780 -1.1694 0.1053 6 6 4.2181 -0.2087 0.8771 7 6 5.5952 -0.2113 0.9807 8 6 6.3396 -1.1729 0.3137 9 8 7.6956 -1.1744 0.4159 10 6 8.2801 -0.2224 1.3071 11 1 7.5460 0.0717 2.0570 12 6 9.4745 -0.8394 1.9882 13 1 9.8109 -1.8245 1.7008 14 6 10.1377 -0.1460 2.9785 15 7 11.2403 -0.6380 3.5000 16 14 9.4702 1.4918 3.5792 17 1 10.0500 2.5909 2.7661 18 1 7.9914 1.5033 3.4443 19 1 9.8386 1.6836 5.0050 20 6 8.7241 1.0103 0.5169 21 17 7.2785 1.8242 -0.1892 22 6 5.7013 -2.1302 -0.4627 23 17 6.6341 -3.3289 -1.3036 24 6 4.3229 -2.1322 -0.5622 25 1 -0.3634 -0.5138 0.8900 26 1 -0.3634 1.0277 -0.0005 27 1 -0.3633 -0.5139 -0.8899 28 1 1.6986 -2.0057 -0.0717 29 1 3.6390 0.5407 1.3962 30 1 6.0926 0.5358 1.5814 31 1 11.5475 -1.5209 3.2409 32 1 9.2414 1.7016 1.1823 33 1 9.3970 0.7053 -0.2845 34 1 3.8256 -2.8793 -1.1629 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001226874607.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:51:52 Heat of formation + Delta-G solvation = -63.073305 kcal Electronic energy + Delta-G solvation = -21960.035601 eV Core-core repulsion = 18331.157848 eV Total energy + Delta-G solvation = -3628.877752 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.53822 -39.32462 -37.27364 -36.09533 -35.25765 -34.36824 -33.35250 -30.91262 -30.59392 -30.11599 -27.71255 -24.91152 -23.34753 -22.73970 -20.59017 -20.47278 -18.44545 -17.62618 -17.28590 -17.03455 -15.84992 -15.19562 -15.03622 -14.72881 -14.37616 -14.12750 -13.78897 -13.54213 -13.21101 -13.05121 -12.94127 -12.69715 -12.48299 -12.44537 -12.16699 -11.59463 -11.27358 -11.19393 -10.95395 -10.67143 -10.50154 -10.24098 -10.10418 -9.91986 -9.62084 -9.49535 -8.98383 -8.79544 -8.54742 -7.37642 -6.82385 -4.51826 1.40850 1.48077 2.42181 2.51798 2.91929 3.03957 3.12141 3.20432 3.31232 3.89323 3.92901 4.13778 4.51493 4.89337 4.91966 5.00659 5.03628 5.28863 5.35525 5.46887 5.60145 5.69787 5.74635 5.85518 5.91706 6.04501 6.25829 6.45176 6.58289 6.66883 6.94246 7.27891 7.32754 7.92724 8.00363 8.11456 8.62015 9.19174 10.58157 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.014525 B = 0.004891 C = 0.004154 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1927.245010 B = 5723.728473 C = 6738.573495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.505 3.495 3 O -0.525 6.525 4 N -0.669 5.669 5 C 0.095 3.905 6 C -0.073 4.073 7 C -0.170 4.170 8 C 0.155 3.845 9 O -0.284 6.284 10 C 0.181 3.819 11 H 0.049 0.951 12 C -0.598 4.598 13 H 0.078 0.922 14 C 0.038 3.962 15 N -0.887 5.887 16 Si 1.032 2.968 17 H -0.274 1.274 18 H -0.271 1.271 19 H -0.275 1.275 20 C -0.053 4.053 21 Cl -0.220 7.220 22 C -0.064 4.064 23 Cl -0.062 7.062 24 C -0.102 4.102 25 H 0.090 0.910 26 H 0.094 0.906 27 H 0.089 0.911 28 H 0.408 0.592 29 H 0.135 0.865 30 H 0.147 0.853 31 H 0.276 0.724 32 H 0.094 0.906 33 H 0.098 0.902 34 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.697 -1.735 -6.151 19.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.293 3.707 3 O -0.400 6.400 4 N -0.316 5.316 5 C 0.002 3.998 6 C -0.093 4.093 7 C -0.189 4.189 8 C 0.106 3.894 9 O -0.195 6.195 10 C 0.124 3.876 11 H 0.066 0.934 12 C -0.636 4.636 13 H 0.096 0.904 14 C -0.169 4.169 15 N -0.519 5.519 16 Si 0.859 3.141 17 H -0.200 1.200 18 H -0.197 1.197 19 H -0.200 1.200 20 C -0.116 4.116 21 Cl -0.194 7.194 22 C -0.092 4.092 23 Cl -0.033 7.033 24 C -0.123 4.123 25 H 0.109 0.891 26 H 0.113 0.887 27 H 0.107 0.893 28 H 0.244 0.756 29 H 0.152 0.848 30 H 0.164 0.836 31 H 0.087 0.913 32 H 0.112 0.888 33 H 0.117 0.883 34 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -17.827 0.136 -5.324 18.605 hybrid contribution -0.440 -1.605 -1.150 2.023 sum -18.267 -1.469 -6.474 19.436 Atomic orbital electron populations 1.21911 0.90990 1.05835 1.04384 1.20972 0.90750 0.83317 0.75667 1.90786 1.70516 1.31171 1.47524 1.43442 1.05038 1.09569 1.73503 1.17258 0.82450 0.99266 1.00809 1.20898 0.93885 0.97917 0.96594 1.21406 0.93912 1.00176 1.03422 1.18850 0.85232 0.92201 0.93097 1.86279 1.14324 1.57072 1.61857 1.21040 0.95196 0.84733 0.86582 0.93364 1.21996 1.13917 1.06382 1.21276 0.90422 1.25744 0.93766 1.04262 0.93154 1.70787 1.18801 1.18778 1.43505 0.84182 0.76684 0.75115 0.78162 1.20048 1.19657 1.20025 1.26214 0.88411 0.96491 1.00484 1.98684 1.49399 1.83608 1.87682 1.19748 0.90854 0.95319 1.03280 1.98340 1.73472 1.55050 1.76475 1.20349 0.90932 1.00618 1.00387 0.89127 0.88700 0.89281 0.75641 0.84769 0.83553 0.91337 0.88833 0.88311 0.84792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.00 10.32 36.00 0.37 -0.63 16 2 C 0.50 5.61 7.68 -10.99 -0.08 5.52 16 3 O -0.52 -8.48 14.83 5.54 0.08 -8.40 16 4 N -0.67 -6.88 5.34 -9.83 -0.05 -6.93 16 5 C 0.10 1.36 6.26 -83.63 -0.52 0.84 16 6 C -0.07 -1.22 8.65 -39.40 -0.34 -1.56 16 7 C -0.17 -3.18 7.07 -39.47 -0.28 -3.46 16 8 C 0.16 3.07 6.17 -39.20 -0.24 2.83 16 9 O -0.28 -6.38 9.15 -19.71 -0.18 -6.56 16 10 C 0.18 4.16 1.74 -27.88 -0.05 4.11 16 11 H 0.05 1.11 4.03 -51.93 -0.21 0.90 16 12 C -0.60 -15.90 9.24 -34.44 -0.32 -16.22 16 13 H 0.08 2.27 8.04 -52.49 -0.42 1.84 16 14 C 0.04 1.03 5.43 -17.82 -0.10 0.93 16 15 N -0.89 -25.38 13.70 55.43 0.76 -24.62 16 16 Si 1.03 23.04 25.32 -169.99 -4.30 18.74 16 17 H -0.27 -5.74 6.77 56.52 0.38 -5.36 16 18 H -0.27 -5.61 6.36 56.52 0.36 -5.25 16 19 H -0.27 -6.13 7.11 56.52 0.40 -5.73 16 20 C -0.05 -1.12 5.94 37.16 0.22 -0.90 16 21 Cl -0.22 -4.28 25.46 -51.86 -1.32 -5.60 16 22 C -0.06 -1.11 6.33 -39.39 -0.25 -1.36 16 23 Cl -0.06 -1.04 28.50 -51.86 -1.48 -2.52 16 24 C -0.10 -1.45 9.74 -39.38 -0.38 -1.83 16 25 H 0.09 0.35 8.14 -51.93 -0.42 -0.07 16 26 H 0.09 0.59 8.12 -51.93 -0.42 0.17 16 27 H 0.09 0.33 8.14 -51.93 -0.42 -0.09 16 28 H 0.41 2.54 8.82 -40.82 -0.36 2.18 16 29 H 0.13 2.23 6.48 -52.49 -0.34 1.89 16 30 H 0.15 2.86 4.80 -52.48 -0.25 2.61 16 31 H 0.28 7.88 8.72 -40.82 -0.36 7.52 16 32 H 0.09 1.95 4.36 -51.93 -0.23 1.72 16 33 H 0.10 2.04 8.14 -51.93 -0.42 1.61 16 34 H 0.13 1.48 8.06 -52.49 -0.42 1.05 16 LS Contribution 312.97 15.07 4.72 4.72 Total: -1.00 -31.02 312.97 -6.89 -37.90 By element: Atomic # 1 Polarization: 8.13 SS G_CDS: -3.14 Total: 5.00 kcal Atomic # 6 Polarization: -9.75 SS G_CDS: -1.97 Total: -11.73 kcal Atomic # 7 Polarization: -32.26 SS G_CDS: 0.71 Total: -31.55 kcal Atomic # 8 Polarization: -14.86 SS G_CDS: -0.10 Total: -14.96 kcal Atomic # 14 Polarization: 23.04 SS G_CDS: -4.30 Total: 18.74 kcal Atomic # 17 Polarization: -5.32 SS G_CDS: -2.80 Total: -8.12 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -31.02 -6.89 -37.90 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001226874607.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.169 kcal (2) G-P(sol) polarization free energy of solvation -31.017 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.186 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.905 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.073 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds