Wall clock time and date at job start Tue Mar 31 2020 11:51:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 O 1.21300 * 120.00208 * 2 1 4 4 N 1.34779 * 120.00447 * 180.02562 * 2 1 3 5 5 C 1.40118 * 120.00045 * 184.49151 * 4 2 1 6 6 C 1.38716 * 120.08684 * 32.97195 * 5 4 2 7 7 C 1.38293 * 119.97101 * 180.27829 * 6 5 4 8 8 Cl 1.73608 * 119.92909 * 179.76706 * 7 6 5 9 9 C 1.38377 * 120.14147 * 359.74077 * 7 6 5 10 10 C 1.38247 * 120.16268 * 0.02562 * 9 7 6 11 11 C 1.38537 * 120.02698 * 359.97438 * 10 9 7 12 12 O 1.35994 * 120.06753 * 179.97438 * 11 10 9 13 13 C 1.42898 * 117.00261 * 4.70422 * 12 11 10 14 14 H 1.09001 * 109.46913 * 22.79881 * 13 12 11 15 15 C 1.50695 * 109.47734 * 142.79561 * 13 12 11 16 16 H 1.08003 * 119.99874 * 5.31239 * 15 13 12 17 17 C 1.37870 * 120.00492 * 185.30677 * 15 13 12 18 18 N 1.31523 * 120.00434 * 185.42229 * 17 15 13 19 19 Si 1.86802 * 119.99928 * 5.43048 * 17 15 13 20 20 H 1.48500 * 109.46797 * 269.99591 * 19 17 15 21 21 H 1.48498 * 109.47202 * 29.99421 * 19 17 15 22 22 H 1.48496 * 109.47265 * 149.99847 * 19 17 15 23 23 C 1.52996 * 109.47226 * 262.79952 * 13 12 11 24 24 Cl 1.80304 * 109.47113 * 64.13679 * 23 13 12 25 25 H 1.09004 * 109.46635 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47117 * 299.99723 * 1 2 3 27 27 H 1.09004 * 109.47071 * 59.99979 * 1 2 3 28 28 H 0.97005 * 119.99371 * 4.48443 * 4 2 1 29 29 H 1.08002 * 120.01283 * 0.02562 * 6 5 4 30 30 H 1.08002 * 119.92020 * 179.97438 * 9 7 6 31 31 H 1.08003 * 119.98126 * 179.97438 * 10 9 7 32 32 H 0.96999 * 119.99717 * 355.00032 * 18 17 15 33 33 H 1.08997 * 109.47356 * 184.13851 * 23 13 12 34 34 H 1.09000 * 109.46869 * 304.14020 * 23 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1135 1.0505 0.0000 4 7 2.1810 -1.1672 -0.0005 5 6 3.5789 -1.1690 0.0945 6 6 4.2270 -0.1896 0.8327 7 6 5.6072 -0.1903 0.9202 8 17 6.4175 1.0395 1.8394 9 6 6.3437 -1.1694 0.2770 10 6 5.7034 -2.1510 -0.4563 11 6 4.3211 -2.1569 -0.5485 12 8 3.6904 -3.1218 -1.2700 13 6 4.5064 -4.1573 -1.8213 14 1 5.4331 -4.2314 -1.2522 15 6 3.7683 -5.4693 -1.7519 16 1 2.7444 -5.4954 -1.4090 17 6 4.3998 -6.6363 -2.1261 18 7 3.7256 -7.7648 -2.1677 19 14 6.2132 -6.6148 -2.5740 20 1 6.3605 -6.3607 -4.0296 21 1 6.8985 -5.5401 -1.8120 22 1 6.8221 -7.9264 -2.2364 23 6 4.8288 -3.8301 -3.2807 24 17 5.8169 -2.3238 -3.3547 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 1.6982 -2.0059 -0.0666 29 1 3.6542 0.5755 1.3356 30 1 7.4214 -1.1663 0.3473 31 1 6.2811 -2.9136 -0.9575 32 1 2.8040 -7.7905 -1.8661 33 1 5.3889 -4.6542 -3.7226 34 1 3.9010 -3.6836 -3.8337 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001229419082.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:51:55 Heat of formation + Delta-G solvation = -66.699399 kcal Electronic energy + Delta-G solvation = -22194.386412 eV Core-core repulsion = 18565.351420 eV Total energy + Delta-G solvation = -3629.034992 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -40.58532 -39.12005 -37.39309 -36.09585 -35.29585 -34.54104 -33.51710 -31.00227 -30.57590 -29.45857 -28.11812 -25.02955 -23.58794 -22.30868 -20.92794 -20.16861 -18.58597 -17.72005 -17.03736 -16.88108 -15.76609 -15.27540 -15.15078 -14.87784 -14.46578 -14.12924 -13.71846 -13.55954 -13.22086 -13.10851 -12.74906 -12.67923 -12.64106 -12.32227 -12.02162 -11.78019 -11.56770 -11.12155 -10.87232 -10.75836 -10.69192 -10.31547 -10.11156 -9.92729 -9.83823 -9.58137 -9.12923 -8.89784 -8.28978 -7.48708 -6.92411 -4.63656 1.36612 1.53339 2.34670 2.62524 2.81808 3.04368 3.12703 3.17307 3.23776 3.77407 3.92265 4.05016 4.72970 4.79354 5.04832 5.10666 5.18482 5.27142 5.38973 5.52730 5.60160 5.67801 5.73256 5.80952 5.96112 6.09957 6.33584 6.42572 6.50199 6.61139 6.89512 7.20920 7.47101 7.80537 7.98961 8.17015 8.48181 9.07683 10.47734 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.013201 B = 0.005151 C = 0.004286 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2120.588311 B = 5434.931604 C = 6530.904591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.508 3.492 3 O -0.535 6.535 4 N -0.657 5.657 5 C 0.110 3.890 6 C -0.079 4.079 7 C -0.066 4.066 8 Cl -0.083 7.083 9 C -0.084 4.084 10 C -0.172 4.172 11 C 0.138 3.862 12 O -0.296 6.296 13 C 0.183 3.817 14 H 0.050 0.950 15 C -0.601 4.601 16 H 0.076 0.924 17 C 0.039 3.961 18 N -0.884 5.884 19 Si 1.031 2.969 20 H -0.274 1.274 21 H -0.271 1.271 22 H -0.274 1.274 23 C -0.052 4.052 24 Cl -0.220 7.220 25 H 0.079 0.921 26 H 0.096 0.904 27 H 0.096 0.904 28 H 0.418 0.582 29 H 0.145 0.855 30 H 0.131 0.869 31 H 0.148 0.852 32 H 0.276 0.724 33 H 0.094 0.906 34 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.705 10.749 4.099 11.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.296 3.704 3 O -0.412 6.412 4 N -0.303 5.303 5 C 0.016 3.984 6 C -0.100 4.100 7 C -0.093 4.093 8 Cl -0.054 7.054 9 C -0.103 4.103 10 C -0.191 4.191 11 C 0.089 3.911 12 O -0.209 6.209 13 C 0.127 3.873 14 H 0.068 0.932 15 C -0.639 4.639 16 H 0.094 0.906 17 C -0.169 4.169 18 N -0.516 5.516 19 Si 0.858 3.142 20 H -0.200 1.200 21 H -0.196 1.196 22 H -0.200 1.200 23 C -0.115 4.115 24 Cl -0.194 7.194 25 H 0.098 0.902 26 H 0.115 0.885 27 H 0.115 0.885 28 H 0.255 0.745 29 H 0.163 0.837 30 H 0.149 0.851 31 H 0.165 0.835 32 H 0.087 0.913 33 H 0.112 0.888 34 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 0.795 10.703 3.570 11.311 hybrid contribution -1.217 0.507 0.330 1.359 sum -0.422 11.210 3.899 11.876 Atomic orbital electron populations 1.21830 0.90944 1.04653 1.05359 1.20975 0.90836 0.83173 0.75368 1.90730 1.70459 1.31256 1.48777 1.43464 1.04676 1.10085 1.72061 1.16758 0.82897 0.97709 1.01059 1.20648 0.92423 0.98849 0.98104 1.20382 0.92091 0.94413 1.02434 1.98324 1.79524 1.54396 1.73159 1.20761 1.00013 0.93186 0.96344 1.21290 0.93240 1.01614 1.02974 1.18945 0.90878 0.90165 0.91110 1.86122 1.37497 1.33940 1.63298 1.21027 0.93297 0.85425 0.87568 0.93218 1.21960 1.01971 0.88710 1.51241 0.90560 1.25747 1.05752 0.91635 0.93748 1.70803 1.12648 1.27425 1.40709 0.84182 0.74986 0.77477 0.77553 1.20047 1.19615 1.19952 1.26195 0.96667 0.85364 1.03263 1.98681 1.76100 1.45735 1.98927 0.90192 0.88530 0.88509 0.74535 0.83703 0.85106 0.83487 0.91330 0.88802 0.88421 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.46 10.39 36.01 0.37 -1.08 16 2 C 0.51 6.98 7.69 -10.98 -0.08 6.90 16 3 O -0.54 -9.31 14.74 5.54 0.08 -9.23 16 4 N -0.66 -9.54 5.21 -9.75 -0.05 -9.59 16 5 C 0.11 1.89 6.31 -83.50 -0.53 1.36 16 6 C -0.08 -1.32 8.44 -39.38 -0.33 -1.65 16 7 C -0.07 -1.04 6.32 -39.51 -0.25 -1.29 16 8 Cl -0.08 -1.16 28.95 -51.86 -1.50 -2.66 16 9 C -0.08 -1.31 9.82 -39.53 -0.39 -1.70 16 10 C -0.17 -3.00 7.12 -39.47 -0.28 -3.28 16 11 C 0.14 2.55 6.18 -39.08 -0.24 2.31 16 12 O -0.30 -5.97 9.22 -19.72 -0.18 -6.15 16 13 C 0.18 3.89 1.73 -27.89 -0.05 3.84 16 14 H 0.05 1.06 4.01 -51.93 -0.21 0.86 16 15 C -0.60 -14.87 9.24 -34.45 -0.32 -15.18 16 16 H 0.08 2.04 8.04 -52.48 -0.42 1.62 16 17 C 0.04 1.00 5.43 -17.82 -0.10 0.90 16 18 N -0.88 -24.17 13.70 55.43 0.76 -23.41 16 19 Si 1.03 21.88 25.33 -169.99 -4.31 17.57 16 20 H -0.27 -5.46 6.77 56.52 0.38 -5.07 16 21 H -0.27 -5.27 6.36 56.52 0.36 -4.91 16 22 H -0.27 -5.87 7.11 56.52 0.40 -5.46 16 23 C -0.05 -1.02 5.94 37.16 0.22 -0.80 16 24 Cl -0.22 -3.99 25.55 -51.86 -1.32 -5.31 16 25 H 0.08 0.54 7.92 -51.93 -0.41 0.13 16 26 H 0.10 0.70 8.14 -51.93 -0.42 0.28 16 27 H 0.10 0.77 8.14 -51.93 -0.42 0.35 16 28 H 0.42 5.38 8.36 -40.82 -0.34 5.04 16 29 H 0.15 2.41 6.37 -52.49 -0.33 2.07 16 30 H 0.13 1.75 8.06 -52.49 -0.42 1.33 16 31 H 0.15 2.62 4.85 -52.48 -0.25 2.36 16 32 H 0.28 7.49 8.72 -40.82 -0.36 7.13 16 33 H 0.09 1.83 4.36 -51.93 -0.23 1.61 16 34 H 0.10 1.87 8.14 -51.93 -0.42 1.45 16 LS Contribution 312.64 15.07 4.71 4.71 Total: -1.00 -28.10 312.64 -6.89 -34.98 By element: Atomic # 1 Polarization: 11.88 SS G_CDS: -3.10 Total: 8.78 kcal Atomic # 6 Polarization: -7.72 SS G_CDS: -1.97 Total: -9.69 kcal Atomic # 7 Polarization: -33.71 SS G_CDS: 0.71 Total: -33.00 kcal Atomic # 8 Polarization: -15.28 SS G_CDS: -0.10 Total: -15.38 kcal Atomic # 14 Polarization: 21.88 SS G_CDS: -4.31 Total: 17.57 kcal Atomic # 17 Polarization: -5.15 SS G_CDS: -2.83 Total: -7.97 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -28.10 -6.89 -34.98 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001229419082.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.716 kcal (2) G-P(sol) polarization free energy of solvation -28.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.699 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds