Wall clock time and date at job start Tue Mar 31 2020 11:38:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 Cl 1.80302 * 109.46612 * 2 1 4 4 Cl 1.80300 * 109.47363 * 239.99961 * 2 1 3 5 5 C 1.50700 * 109.46975 * 119.99587 * 2 1 3 6 6 O 1.21274 * 120.00375 * 25.00318 * 5 2 1 7 7 N 1.34783 * 119.99813 * 205.00071 * 5 2 1 8 8 C 1.46500 * 120.00093 * 180.02562 * 7 5 2 9 9 C 1.50699 * 109.47192 * 180.02562 * 8 7 5 10 10 C 1.38328 * 119.96230 * 269.98024 * 9 8 7 11 11 C 1.38281 * 120.13505 * 180.02562 * 10 9 8 12 12 C 1.38120 * 120.06679 * 359.68445 * 11 10 9 13 13 C 1.38852 * 119.93490 * 0.58817 * 12 11 10 14 14 O 1.35752 * 120.07221 * 179.70368 * 13 12 11 15 15 C 1.34829 * 116.99954 * 354.17311 * 14 13 12 16 16 H 1.07998 * 119.99999 * 5.03596 * 15 14 13 17 17 C 1.38656 * 119.99670 * 185.03445 * 15 14 13 18 18 N 1.31550 * 120.00275 * 0.02562 * 17 15 14 19 19 Si 1.86802 * 119.99668 * 179.97438 * 17 15 14 20 20 H 1.48502 * 109.47010 * 0.02562 * 19 17 15 21 21 H 1.48501 * 109.46908 * 119.99967 * 19 17 15 22 22 H 1.48504 * 109.47373 * 240.00300 * 19 17 15 23 23 C 1.38073 * 119.96534 * 89.99825 * 9 8 7 24 24 H 1.08998 * 109.47238 * 299.99799 * 1 2 3 25 25 H 1.08998 * 109.47245 * 60.00710 * 1 2 3 26 26 H 1.09008 * 109.46458 * 180.02562 * 1 2 3 27 27 H 0.97004 * 119.99718 * 0.02562 * 7 5 2 28 28 H 1.09002 * 109.46490 * 60.00223 * 8 7 5 29 29 H 1.08992 * 109.46880 * 300.00477 * 8 7 5 30 30 H 1.08001 * 119.93314 * 0.02562 * 10 9 8 31 31 H 1.07993 * 119.96315 * 179.97438 * 11 10 9 32 32 H 1.08006 * 120.03715 * 180.31908 * 12 11 10 33 33 H 0.96999 * 119.99936 * 179.97438 * 18 17 15 34 34 H 1.07996 * 120.03547 * 0.02562 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 17 2.1309 1.7000 0.0000 4 17 2.1311 -0.8499 -1.4721 5 6 2.0323 -0.7103 1.2305 6 8 1.3371 -1.5392 1.7785 7 7 3.2544 -0.4244 1.7220 8 6 3.7429 -1.1153 2.9179 9 6 5.1241 -0.6169 3.2570 10 6 6.2353 -1.2443 2.7231 11 6 7.5044 -0.7902 3.0323 12 6 7.6657 0.2957 3.8703 13 6 6.5525 0.9241 4.4123 14 8 6.7080 1.9879 5.2411 15 6 7.9689 2.3096 5.5941 16 1 8.8034 1.7822 5.1563 17 6 8.1940 3.3177 6.5191 18 7 7.1774 3.9599 7.0527 19 14 9.9409 3.7630 7.0087 20 1 10.8971 2.8986 6.2713 21 1 10.2012 5.1862 6.6740 22 1 10.1130 3.5584 8.4695 23 6 5.2790 0.4652 4.1004 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5137 -0.8900 26 1 -0.3632 -1.0278 0.0005 27 1 3.8103 0.2388 1.2839 28 1 3.7798 -2.1881 2.7281 29 1 3.0704 -0.9169 3.7523 30 1 6.1116 -2.0905 2.0635 31 1 8.3700 -1.2824 2.6142 32 1 8.6570 0.6532 4.1073 33 1 7.3349 4.6649 7.7001 34 1 4.4110 0.9541 4.5175 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001337309369.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:38:57 Heat of formation + Delta-G solvation = -60.543334 kcal Electronic energy + Delta-G solvation = -21041.585149 eV Core-core repulsion = 17412.817105 eV Total energy + Delta-G solvation = -3628.768045 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -40.20853 -39.12598 -37.15071 -36.85951 -36.39887 -34.80966 -32.41165 -32.33333 -30.90356 -29.21759 -26.65888 -25.36778 -24.02343 -21.77160 -20.92130 -20.64705 -18.32148 -17.58191 -17.11349 -16.77929 -16.23098 -15.29170 -14.96187 -14.70180 -14.42875 -14.27277 -14.13830 -13.66269 -13.52475 -12.83284 -12.67478 -12.50968 -12.49957 -12.23960 -11.99027 -11.72280 -11.54181 -11.42224 -11.25174 -11.16916 -10.99271 -10.88113 -10.75608 -10.49110 -10.14980 -9.45158 -9.27971 -8.92961 -8.31468 -7.37763 -6.52473 -4.11983 0.80852 1.16490 1.78376 2.21467 2.56083 2.80191 3.07978 3.09364 3.14866 3.82283 3.89718 4.20062 4.48941 4.83398 5.02284 5.05912 5.09815 5.17821 5.45883 5.55437 5.64174 5.72972 5.81454 6.01827 6.13193 6.20221 6.49172 6.75986 6.94607 7.11279 7.13720 7.23591 7.31519 7.65511 7.73451 7.91536 8.92961 9.60884 10.65228 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.021591 B = 0.002905 C = 0.002777 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1296.498227 B = 9637.394908 C =10081.527715 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.067 3.933 3 Cl -0.112 7.112 4 Cl -0.108 7.108 5 C 0.518 3.482 6 O -0.510 6.510 7 N -0.700 5.700 8 C 0.167 3.833 9 C -0.077 4.077 10 C -0.193 4.193 11 C -0.075 4.075 12 C -0.223 4.223 13 C 0.150 3.850 14 O -0.175 6.175 15 C -0.394 4.394 16 H 0.093 0.907 17 C 0.040 3.960 18 N -0.860 5.860 19 Si 0.941 3.059 20 H -0.266 1.266 21 H -0.275 1.275 22 H -0.275 1.275 23 C -0.169 4.169 24 H 0.091 0.909 25 H 0.088 0.912 26 H 0.098 0.902 27 H 0.410 0.590 28 H 0.079 0.921 29 H 0.080 0.920 30 H 0.108 0.892 31 H 0.110 0.890 32 H 0.128 0.872 33 H 0.270 0.730 34 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.035 -7.397 -13.998 18.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C 0.012 3.988 3 Cl -0.086 7.086 4 Cl -0.081 7.081 5 C 0.299 3.701 6 O -0.386 6.386 7 N -0.351 5.351 8 C 0.045 3.955 9 C -0.078 4.078 10 C -0.213 4.213 11 C -0.094 4.094 12 C -0.243 4.243 13 C 0.096 3.904 14 O -0.079 6.079 15 C -0.470 4.470 16 H 0.111 0.889 17 C -0.164 4.164 18 N -0.494 5.494 19 Si 0.766 3.234 20 H -0.191 1.191 21 H -0.201 1.201 22 H -0.201 1.201 23 C -0.189 4.189 24 H 0.110 0.890 25 H 0.107 0.893 26 H 0.116 0.884 27 H 0.246 0.754 28 H 0.097 0.903 29 H 0.098 0.902 30 H 0.126 0.874 31 H 0.128 0.872 32 H 0.146 0.854 33 H 0.080 0.920 34 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -9.624 -7.579 -13.405 18.159 hybrid contribution 1.431 0.678 -0.124 1.588 sum -8.193 -6.901 -13.529 17.257 Atomic orbital electron populations 1.22278 0.86662 1.06029 1.05211 1.27067 0.99388 0.83890 0.88442 1.98822 1.89680 1.21740 1.98351 1.98805 1.89917 1.78607 1.40796 1.19618 0.82734 0.83442 0.84274 1.90783 1.56183 1.32770 1.58856 1.46182 1.16336 1.42782 1.29809 1.20302 0.92443 0.96355 0.86411 1.19190 0.93198 0.96615 0.98794 1.20484 0.92150 1.03064 1.05599 1.20747 0.96412 0.95576 0.96630 1.21261 0.99398 1.00014 1.03624 1.19308 0.93075 0.87507 0.90475 1.83981 1.30752 1.38319 1.54818 1.21379 0.81231 1.19632 1.24723 0.88949 1.25301 0.99885 0.95728 0.95534 1.70041 1.30520 1.21873 1.26996 0.85642 0.80207 0.78777 0.78778 1.19063 1.20090 1.20072 1.20083 0.95481 0.99287 1.04013 0.89008 0.89304 0.88360 0.75366 0.90277 0.90172 0.87411 0.87189 0.85392 0.91963 0.86313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.18 8.25 37.16 0.31 -0.87 16 2 C 0.07 0.69 1.53 -27.88 -0.04 0.65 16 3 Cl -0.11 -1.20 26.93 -51.86 -1.40 -2.59 16 4 Cl -0.11 -1.09 28.18 -51.86 -1.46 -2.55 16 5 C 0.52 6.57 6.75 -10.98 -0.07 6.50 16 6 O -0.51 -7.62 16.09 5.56 0.09 -7.53 16 7 N -0.70 -9.01 5.37 -61.47 -0.33 -9.34 16 8 C 0.17 2.30 5.80 -5.19 -0.03 2.27 16 9 C -0.08 -1.26 5.25 -104.65 -0.55 -1.81 16 10 C -0.19 -3.07 9.70 -39.53 -0.38 -3.45 16 11 C -0.08 -1.29 10.04 -39.61 -0.40 -1.68 16 12 C -0.22 -4.58 9.17 -39.40 -0.36 -4.94 16 13 C 0.15 3.44 6.65 -39.11 -0.26 3.18 16 14 O -0.18 -4.83 9.76 0.05 0.00 -4.82 16 15 C -0.39 -10.65 9.49 30.89 0.29 -10.36 16 16 H 0.09 2.31 5.21 -52.49 -0.27 2.03 16 17 C 0.04 1.08 5.49 -17.52 -0.10 0.98 16 18 N -0.86 -24.65 13.67 55.48 0.76 -23.89 16 19 Si 0.94 19.99 29.55 -169.99 -5.02 14.97 16 20 H -0.27 -5.41 7.11 56.52 0.40 -5.00 16 21 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 22 H -0.28 -5.75 7.11 56.52 0.40 -5.35 16 23 C -0.17 -3.32 9.65 -39.39 -0.38 -3.70 16 24 H 0.09 0.73 8.14 -51.93 -0.42 0.31 16 25 H 0.09 0.56 8.14 -51.93 -0.42 0.14 16 26 H 0.10 0.81 7.87 -51.92 -0.41 0.40 16 27 H 0.41 5.14 7.32 -40.82 -0.30 4.84 16 28 H 0.08 1.03 8.09 -51.93 -0.42 0.61 16 29 H 0.08 1.12 8.08 -51.93 -0.42 0.70 16 30 H 0.11 1.45 8.06 -52.49 -0.42 1.03 16 31 H 0.11 1.57 8.06 -52.49 -0.42 1.15 16 32 H 0.13 2.64 5.64 -52.48 -0.30 2.34 16 33 H 0.27 7.09 8.31 -40.82 -0.34 6.76 16 34 H 0.12 2.30 8.06 -52.49 -0.42 1.88 16 LS Contribution 329.60 15.07 4.97 4.97 Total: -1.00 -29.81 329.60 -7.73 -37.54 By element: Atomic # 1 Polarization: 9.85 SS G_CDS: -3.37 Total: 6.48 kcal Atomic # 6 Polarization: -11.26 SS G_CDS: -1.97 Total: -13.23 kcal Atomic # 7 Polarization: -33.66 SS G_CDS: 0.43 Total: -33.23 kcal Atomic # 8 Polarization: -12.45 SS G_CDS: 0.09 Total: -12.36 kcal Atomic # 14 Polarization: 19.99 SS G_CDS: -5.02 Total: 14.97 kcal Atomic # 17 Polarization: -2.29 SS G_CDS: -2.86 Total: -5.15 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -29.81 -7.73 -37.54 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001337309369.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.002 kcal (2) G-P(sol) polarization free energy of solvation -29.806 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.808 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.735 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds