Wall clock time and date at job start Tue Mar 31 2020 12:10:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39925 * 120.45761 * 313.14779 * 3 2 1 5 5 N 1.31317 * 120.74234 * 179.74553 * 4 3 2 6 6 C 1.32825 * 121.81118 * 0.56720 * 5 4 3 7 7 C 1.48088 * 119.57695 * 179.70623 * 6 5 4 8 8 O 1.21553 * 119.99985 * 179.73051 * 7 6 5 9 9 N 1.34777 * 119.99726 * 359.72765 * 7 6 5 10 10 C 1.40481 * 119.99680 * 179.72225 * 9 7 6 11 11 C 1.40675 * 126.08808 * 0.30625 * 10 9 7 12 12 N 1.30900 * 108.38591 * 179.97438 * 11 10 9 13 13 N 1.40072 * 108.41329 * 359.97438 * 12 11 10 14 14 C 1.37313 * 126.06129 * 180.02562 * 13 12 11 15 15 H 1.07997 * 120.00129 * 179.97438 * 14 13 12 16 16 C 1.38994 * 120.00044 * 359.97438 * 14 13 12 17 17 N 1.31293 * 119.99958 * 359.97438 * 16 14 13 18 18 Si 1.86803 * 119.99829 * 179.97438 * 16 14 13 19 19 H 1.48497 * 109.46941 * 89.99762 * 18 16 14 20 20 H 1.48502 * 109.46514 * 209.99424 * 18 16 14 21 21 H 1.48500 * 109.47041 * 329.99332 * 18 16 14 22 22 C 1.35716 * 126.08628 * 179.97438 * 10 9 7 23 23 C 1.39498 * 120.84279 * 359.43308 * 6 5 4 24 24 Cl 1.73598 * 120.41162 * 180.29470 * 23 6 5 25 25 C 1.38546 * 119.16832 * 0.27283 * 23 6 5 26 26 H 1.08001 * 119.63078 * 0.04436 * 4 3 2 27 27 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 28 28 H 1.08004 * 125.80819 * 0.02562 * 11 10 9 29 29 H 0.96998 * 119.99957 * 180.02562 * 17 16 14 30 30 H 1.07998 * 126.25190 * 359.97438 * 22 10 9 31 31 H 1.08002 * 120.82333 * 179.97438 * 25 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2777 -0.8239 0.8800 5 7 4.5908 -0.8315 0.8813 6 6 5.2963 -0.0573 0.0645 7 6 6.7757 -0.1008 0.1123 8 8 7.4289 0.6008 -0.6351 9 7 7.3980 -0.9183 0.9847 10 6 8.8014 -0.9638 1.0261 11 6 9.6789 -0.2114 0.2243 12 7 10.9073 -0.5243 0.5507 13 7 10.8635 -1.4843 1.5698 14 6 11.9477 -2.0643 2.1810 15 1 11.8002 -2.7973 2.9603 16 6 13.2351 -1.7079 1.7969 17 7 13.4145 -0.8171 0.8492 18 14 14.7100 -2.4965 2.6290 19 1 15.0968 -3.7252 1.8902 20 1 15.8469 -1.5411 2.6302 21 1 14.3588 -2.8498 4.0279 22 6 9.5521 -1.7370 1.8511 23 6 4.6613 0.7920 -0.8419 24 17 5.5944 1.7935 -1.9097 25 6 3.2768 0.8259 -0.8794 26 1 2.7394 -1.4649 1.5625 27 1 6.8768 -1.4784 1.5810 28 1 9.3885 0.5035 -0.5313 29 1 14.3129 -0.5687 0.5809 30 1 9.1799 -2.4271 2.5937 31 1 2.7576 1.4738 -1.5702 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001361865689.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:10:25 Heat of formation + Delta-G solvation = 128.109142 kcal Electronic energy + Delta-G solvation = -21930.648569 eV Core-core repulsion = 18241.246367 eV Total energy + Delta-G solvation = -3689.402202 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 317.042 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.07788 -39.79241 -38.44424 -37.07954 -36.74567 -34.35174 -33.46359 -32.94948 -31.83965 -30.27165 -28.00453 -26.07504 -24.67969 -24.23553 -21.57338 -20.77875 -19.73390 -19.46935 -18.17344 -17.49514 -17.12772 -15.67476 -15.53213 -15.48851 -15.17474 -14.95127 -14.45380 -14.10954 -13.96636 -13.60268 -13.58870 -13.45060 -13.03162 -12.98107 -12.84744 -12.24246 -11.71277 -11.62419 -11.28992 -11.27200 -10.93566 -10.55258 -10.45221 -10.35807 -10.17835 -9.39899 -9.19209 -9.15471 -8.84947 -8.10264 -6.73186 -6.59366 -4.25532 -0.30628 0.46500 1.69732 2.11246 2.16381 2.85340 2.99260 3.02693 3.08545 3.10341 3.28798 3.39446 3.73274 3.74965 3.85371 4.04643 4.29751 4.40918 4.56623 4.62994 4.87507 4.99285 5.18252 5.29214 5.69724 6.22381 6.41233 6.80788 6.86274 6.91047 6.99803 7.15801 7.19169 7.81916 8.10047 8.22343 8.54414 8.74672 9.33130 9.62374 10.36382 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.031358 B = 0.002715 C = 0.002501 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 892.690189 B =10311.027773 C =11193.855292 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.397 5.397 2 C 0.258 3.742 3 C -0.059 4.059 4 C 0.155 3.845 5 N -0.444 5.444 6 C 0.137 3.863 7 C 0.536 3.464 8 O -0.505 6.505 9 N -0.591 5.591 10 C -0.064 4.064 11 C -0.026 4.026 12 N -0.261 5.261 13 N -0.140 5.140 14 C -0.321 4.321 15 H 0.117 0.883 16 C 0.046 3.954 17 N -0.768 5.768 18 Si 0.935 3.065 19 H -0.270 1.270 20 H -0.276 1.276 21 H -0.263 1.263 22 C -0.080 4.080 23 C -0.048 4.048 24 Cl 0.004 6.996 25 C -0.025 4.025 26 H 0.179 0.821 27 H 0.407 0.593 28 H 0.178 0.822 29 H 0.275 0.725 30 H 0.148 0.852 31 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.040 0.594 -0.570 17.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.072 5.072 2 C -0.059 4.059 3 C -0.065 4.065 4 C -0.008 4.008 5 N -0.155 5.155 6 C -0.003 4.003 7 C 0.319 3.681 8 O -0.380 6.380 9 N -0.232 5.232 10 C -0.169 4.169 11 C -0.202 4.202 12 N -0.092 5.092 13 N 0.093 4.907 14 C -0.453 4.453 15 H 0.135 0.865 16 C -0.172 4.172 17 N -0.394 5.394 18 Si 0.759 3.241 19 H -0.196 1.196 20 H -0.201 1.201 21 H -0.188 1.188 22 C -0.231 4.231 23 C -0.079 4.079 24 Cl 0.034 6.966 25 C -0.054 4.054 26 H 0.196 0.804 27 H 0.242 0.758 28 H 0.195 0.805 29 H 0.086 0.914 30 H 0.165 0.835 31 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -16.285 0.984 -0.993 16.345 hybrid contribution -0.656 -0.238 0.247 0.740 sum -16.941 0.746 -0.746 16.974 Atomic orbital electron populations 1.81316 1.11609 1.07197 1.07089 1.25159 0.91958 0.94373 0.94396 1.16990 0.85914 1.02240 1.01362 1.23085 0.89197 0.94076 0.94422 1.67900 1.07813 1.19299 1.20466 1.21626 0.96051 0.91479 0.91106 1.17407 0.84498 0.83040 0.83183 1.90808 1.64107 1.42030 1.41020 1.42298 1.05216 1.39772 1.35920 1.17239 0.81002 1.10347 1.08354 1.24168 0.89623 1.03430 1.03000 1.78279 1.17831 1.07564 1.05486 1.44578 1.02863 1.22691 1.20556 1.19903 0.82749 1.23220 1.19442 0.86501 1.25658 0.99546 0.95937 0.96023 1.70211 1.23346 1.23669 1.22158 0.85818 0.79640 0.78988 0.79666 1.19557 1.20072 1.18765 1.21282 0.85136 1.09201 1.07494 1.21787 0.92301 0.97308 0.96488 1.98472 1.71738 1.65315 1.61102 1.21588 0.91606 0.95917 0.96289 0.80367 0.75777 0.80492 0.91385 0.83484 0.82168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -4.00 18.54 41.84 0.78 -3.23 16 2 C 0.26 2.00 15.36 -22.47 -0.35 1.65 16 3 C -0.06 -0.41 5.75 -106.72 -0.61 -1.02 16 4 C 0.16 1.10 10.91 -17.14 -0.19 0.91 16 5 N -0.44 -4.54 9.51 -9.45 -0.09 -4.63 16 6 C 0.14 1.71 6.75 -82.93 -0.56 1.15 16 7 C 0.54 8.94 7.77 -12.22 -0.09 8.85 16 8 O -0.50 -9.76 11.06 5.32 0.06 -9.70 16 9 N -0.59 -10.25 5.45 -10.79 -0.06 -10.31 16 10 C -0.06 -1.41 6.90 -83.87 -0.58 -1.99 16 11 C -0.03 -0.67 10.85 -17.03 -0.18 -0.85 16 12 N -0.26 -7.37 10.39 30.81 0.32 -7.05 16 13 N -0.14 -3.73 3.74 -11.41 -0.04 -3.78 16 14 C -0.32 -8.26 10.25 -14.82 -0.15 -8.42 16 15 H 0.12 2.68 7.83 -52.49 -0.41 2.27 16 16 C 0.05 1.16 5.50 -17.50 -0.10 1.06 16 17 N -0.77 -20.99 11.81 55.50 0.66 -20.34 16 18 Si 0.94 18.49 29.55 -169.99 -5.02 13.47 16 19 H -0.27 -5.27 7.11 56.52 0.40 -4.87 16 20 H -0.28 -5.43 7.11 56.52 0.40 -5.02 16 21 H -0.26 -4.98 7.11 56.52 0.40 -4.58 16 22 C -0.08 -1.81 11.49 -16.39 -0.19 -2.00 16 23 C -0.05 -0.52 6.36 -39.00 -0.25 -0.77 16 24 Cl 0.00 0.05 26.00 -51.86 -1.35 -1.30 16 25 C -0.03 -0.19 9.70 -38.85 -0.38 -0.57 16 26 H 0.18 0.69 8.06 -52.49 -0.42 0.26 16 27 H 0.41 5.83 8.14 -40.82 -0.33 5.49 16 28 H 0.18 4.37 5.92 -52.48 -0.31 4.06 16 29 H 0.28 6.89 8.31 -40.82 -0.34 6.55 16 30 H 0.15 2.78 8.06 -52.49 -0.42 2.36 16 31 H 0.16 0.79 8.06 -52.49 -0.42 0.37 16 LS Contribution 309.34 15.07 4.66 4.66 Total: -1.00 -32.12 309.34 -5.17 -37.30 By element: Atomic # 1 Polarization: 8.34 SS G_CDS: -1.46 Total: 6.89 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -3.63 Total: -1.99 kcal Atomic # 7 Polarization: -50.89 SS G_CDS: 1.56 Total: -49.33 kcal Atomic # 8 Polarization: -9.76 SS G_CDS: 0.06 Total: -9.70 kcal Atomic # 14 Polarization: 18.49 SS G_CDS: -5.02 Total: 13.47 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -1.35 Total: -1.30 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -32.12 -5.17 -37.30 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001361865689.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 165.406 kcal (2) G-P(sol) polarization free energy of solvation -32.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 133.283 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.297 kcal (6) G-S(sol) free energy of system = (1) + (5) 128.109 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds