Wall clock time and date at job start Tue Mar 31 2020 11:47:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 N 1.46493 * 109.46796 * 2 1 4 4 C 1.36934 * 120.00244 * 269.27976 * 3 2 1 5 5 H 1.08000 * 120.00320 * 189.40717 * 4 3 2 6 6 C 1.38809 * 119.99933 * 9.40705 * 4 3 2 7 7 N 1.31624 * 120.00073 * 18.42252 * 6 4 3 8 8 Si 1.86806 * 120.00380 * 198.41883 * 6 4 3 9 9 H 1.48500 * 109.46906 * 60.00201 * 8 6 4 10 10 H 1.48495 * 109.47245 * 179.97438 * 8 6 4 11 11 H 1.48495 * 109.47140 * 300.00480 * 8 6 4 12 12 C 1.46504 * 120.00114 * 89.28770 * 3 2 1 13 13 H 1.08998 * 109.46770 * 7.10590 * 12 3 2 14 14 C 1.50699 * 109.47247 * 127.10479 * 12 3 2 15 15 O 1.20823 * 120.00164 * 9.71839 * 14 12 3 16 16 O 1.34233 * 119.99710 * 189.70997 * 14 12 3 17 17 C 1.50696 * 109.46992 * 247.10750 * 12 3 2 18 18 C 1.38253 * 120.00104 * 331.23944 * 17 12 3 19 19 C 1.38223 * 120.04128 * 180.02562 * 18 17 12 20 20 C 1.38248 * 120.03760 * 359.95459 * 19 18 17 21 21 C 1.38309 * 119.99996 * 0.02562 * 20 19 18 22 22 Cl 1.73595 * 120.02123 * 180.02562 * 21 20 19 23 23 C 1.38300 * 120.00467 * 150.96671 * 17 12 3 24 24 Cl 1.73605 * 120.01373 * 359.97438 * 23 17 12 25 25 H 1.08999 * 109.47294 * 52.67536 * 1 2 3 26 26 H 1.08995 * 109.47095 * 172.67661 * 1 2 3 27 27 H 1.09002 * 109.46751 * 292.67498 * 1 2 3 28 28 H 1.08999 * 109.46782 * 119.99895 * 2 1 3 29 29 H 1.09001 * 109.46611 * 240.00293 * 2 1 3 30 30 H 0.97002 * 120.00112 * 179.97438 * 7 6 4 31 31 H 0.96702 * 117.00100 * 179.97438 * 16 14 12 32 32 H 1.08001 * 119.97988 * 0.02562 * 18 17 12 33 33 H 1.07990 * 119.98274 * 179.97438 * 19 18 17 34 34 H 1.08000 * 120.00231 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.2606 2.0218 -1.1858 5 1 2.7611 2.9788 -1.1901 6 6 1.8628 1.4411 -2.3822 7 7 0.9561 0.4871 -2.3813 8 14 2.6144 2.0137 -3.9937 9 1 4.0830 1.7958 -3.9600 10 1 2.0256 1.2410 -5.1167 11 1 2.3328 3.4591 -4.1853 12 6 2.2476 2.0771 1.2686 13 1 2.1240 1.3768 2.0947 14 6 3.6469 2.6362 1.2892 15 8 4.3163 2.6262 0.2834 16 8 4.1495 3.1454 2.4250 17 6 1.2550 3.2020 1.4110 18 6 0.7486 3.8238 0.2848 19 6 -0.1615 4.8560 0.4144 20 6 -0.5671 5.2673 1.6704 21 6 -0.0619 4.6462 2.7982 22 17 -0.5714 5.1618 4.3755 23 6 0.8463 3.6088 2.6680 24 17 1.4759 2.8232 4.0824 25 1 -0.3634 0.6231 -0.8172 26 1 -0.3633 -1.0192 -0.1310 27 1 -0.3633 0.3962 0.9483 28 1 1.8933 -0.5138 0.8900 29 1 1.8933 -0.5138 -0.8900 30 1 0.6779 0.0816 -3.2174 31 1 5.0515 3.4920 2.3892 32 1 1.0643 3.5027 -0.6969 33 1 -0.5561 5.3413 -0.4659 34 1 -1.2786 6.0736 1.7710 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001605411284.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:47:57 Heat of formation + Delta-G solvation = -33.183577 kcal Electronic energy + Delta-G solvation = -23123.485814 eV Core-core repulsion = 19495.904177 eV Total energy + Delta-G solvation = -3627.581636 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -39.99769 -38.74681 -36.63444 -36.18269 -35.97697 -35.11838 -32.47263 -30.72608 -30.24471 -28.90846 -26.91955 -23.77519 -22.46112 -22.24327 -21.14962 -19.84548 -17.49106 -17.39507 -16.75167 -15.71718 -15.64344 -15.20913 -14.79986 -14.57520 -13.74653 -13.68504 -13.55636 -13.37702 -12.99251 -12.30575 -12.05877 -11.77461 -11.61687 -11.56267 -11.28420 -11.06900 -11.01871 -10.89045 -10.81037 -10.65267 -10.52907 -10.37389 -10.10489 -10.04225 -9.58397 -9.41035 -8.53606 -8.37511 -8.28659 -7.18170 -5.89107 -3.27594 1.36661 1.44897 2.11930 2.53063 2.98326 3.31287 3.39915 3.45724 3.59941 3.94472 4.38076 4.88139 5.10142 5.22205 5.37774 5.45003 5.65044 5.79511 5.87695 6.05036 6.10686 6.25467 6.42384 6.76199 6.84816 6.89058 7.01161 7.04896 7.12723 7.25926 7.55771 7.66576 8.08413 8.13420 8.66359 9.05495 9.58335 10.00866 11.08397 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.016598 B = 0.005682 C = 0.005277 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1686.514005 B = 4926.468690 C = 5304.508451 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.169 3.831 3 N -0.567 5.567 4 C -0.242 4.242 5 H 0.086 0.914 6 C 0.002 3.998 7 N -0.891 5.891 8 Si 0.906 3.094 9 H -0.283 1.283 10 H -0.291 1.291 11 H -0.283 1.283 12 C 0.226 3.774 13 H 0.104 0.896 14 C 0.454 3.546 15 O -0.485 6.485 16 O -0.524 6.524 17 C -0.071 4.071 18 C -0.077 4.077 19 C -0.116 4.116 20 C -0.109 4.109 21 C -0.044 4.044 22 Cl -0.070 7.070 23 C -0.021 4.021 24 Cl -0.054 7.054 25 H 0.097 0.903 26 H 0.024 0.976 27 H 0.005 0.995 28 H 0.007 0.993 29 H 0.092 0.908 30 H 0.255 0.745 31 H 0.391 0.609 32 H 0.186 0.814 33 H 0.132 0.868 34 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.735 6.184 9.525 11.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C 0.046 3.954 3 N -0.286 5.286 4 C -0.369 4.369 5 H 0.104 0.896 6 C -0.196 4.196 7 N -0.536 5.536 8 Si 0.736 3.264 9 H -0.209 1.209 10 H -0.216 1.216 11 H -0.209 1.209 12 C 0.113 3.887 13 H 0.122 0.878 14 C 0.291 3.709 15 O -0.369 6.369 16 O -0.334 6.334 17 C -0.075 4.075 18 C -0.095 4.095 19 C -0.135 4.135 20 C -0.128 4.128 21 C -0.071 4.071 22 Cl -0.042 7.042 23 C -0.049 4.049 24 Cl -0.025 7.025 25 H 0.115 0.885 26 H 0.043 0.957 27 H 0.024 0.976 28 H 0.025 0.975 29 H 0.110 0.890 30 H 0.066 0.934 31 H 0.248 0.752 32 H 0.202 0.798 33 H 0.150 0.850 34 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -2.000 5.827 9.309 11.163 hybrid contribution 0.884 0.483 -0.518 1.133 sum -1.116 6.310 8.791 10.878 Atomic orbital electron populations 1.22321 0.98054 0.99852 0.99795 1.20936 0.93288 0.82665 0.98539 1.44212 1.74187 1.11074 0.99079 1.19253 1.30490 1.04410 0.82797 0.89627 1.24843 0.97774 0.99045 0.97950 1.70214 1.28974 1.28665 1.25732 0.86304 0.79547 0.77923 0.82675 1.20896 1.21645 1.20906 1.18501 0.85749 0.91705 0.92787 0.87795 1.25251 0.90863 0.74544 0.80219 1.90715 1.60420 1.51519 1.34257 1.84709 1.35611 1.73181 1.39933 1.20367 0.99653 0.97205 0.90323 1.22626 0.93048 0.91442 1.02340 1.21325 0.97910 0.97814 0.96441 1.20964 1.00536 1.00407 0.90903 1.20580 1.00899 0.98728 0.86937 1.98342 1.90088 1.90121 1.25601 1.20671 0.98940 0.96542 0.88754 1.98350 1.85927 1.79353 1.38840 0.88463 0.95654 0.97642 0.97483 0.88983 0.93400 0.75173 0.79783 0.84993 0.85022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.06 9.44 37.16 0.35 -2.71 16 2 C 0.17 3.80 5.63 -4.04 -0.02 3.78 16 3 N -0.57 -12.87 2.24 -168.31 -0.38 -13.25 16 4 C -0.24 -5.93 5.17 -15.06 -0.08 -6.01 16 5 H 0.09 2.17 5.93 -52.49 -0.31 1.86 16 6 C 0.00 0.04 5.06 -17.43 -0.09 -0.04 16 7 N -0.89 -22.55 7.92 55.49 0.44 -22.11 16 8 Si 0.91 20.70 29.59 -169.99 -5.03 15.67 16 9 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 10 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 11 H -0.28 -6.36 7.11 56.52 0.40 -5.95 16 12 C 0.23 4.49 2.54 -70.23 -0.18 4.31 16 13 H 0.10 1.98 6.57 -51.93 -0.34 1.64 16 14 C 0.45 8.88 7.45 36.00 0.27 9.14 16 15 O -0.48 -11.07 14.79 -18.75 -0.28 -11.35 16 16 O -0.52 -8.16 12.87 -39.26 -0.51 -8.67 16 17 C -0.07 -1.33 5.02 -104.60 -0.52 -1.86 16 18 C -0.08 -1.44 9.03 -39.58 -0.36 -1.80 16 19 C -0.12 -1.80 10.04 -39.58 -0.40 -2.20 16 20 C -0.11 -1.56 9.83 -39.55 -0.39 -1.95 16 21 C -0.04 -0.68 6.32 -39.46 -0.25 -0.93 16 22 Cl -0.07 -0.96 27.96 -51.86 -1.45 -2.41 16 23 C -0.02 -0.35 6.32 -39.47 -0.25 -0.60 16 24 Cl -0.05 -0.84 25.77 -51.86 -1.34 -2.18 16 25 H 0.10 2.36 6.14 -51.93 -0.32 2.05 16 26 H 0.02 0.51 8.14 -51.93 -0.42 0.08 16 27 H 0.00 0.10 8.14 -51.93 -0.42 -0.33 16 28 H 0.01 0.14 7.88 -51.93 -0.41 -0.27 16 29 H 0.09 2.30 6.08 -51.93 -0.32 1.98 16 30 H 0.26 6.41 8.31 -40.82 -0.34 6.07 16 31 H 0.39 4.40 9.10 45.56 0.41 4.82 16 32 H 0.19 3.94 4.25 -52.49 -0.22 3.72 16 33 H 0.13 1.72 8.06 -52.49 -0.42 1.30 16 34 H 0.13 1.52 8.06 -52.49 -0.42 1.10 16 LS Contribution 311.00 15.07 4.69 4.69 Total: -1.00 -26.92 311.00 -8.10 -35.01 By element: Atomic # 1 Polarization: 7.80 SS G_CDS: -2.33 Total: 5.46 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -1.92 Total: -0.87 kcal Atomic # 7 Polarization: -35.42 SS G_CDS: 0.06 Total: -35.36 kcal Atomic # 8 Polarization: -19.23 SS G_CDS: -0.78 Total: -20.01 kcal Atomic # 14 Polarization: 20.70 SS G_CDS: -5.03 Total: 15.67 kcal Atomic # 17 Polarization: -1.81 SS G_CDS: -2.79 Total: -4.59 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -26.92 -8.10 -35.01 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001605411284.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.830 kcal (2) G-P(sol) polarization free energy of solvation -26.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.098 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds