Wall clock time and date at job start Tue Mar 31 2020 11:50:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.53005 * 109.46699 * 2 1 4 4 C 1.52998 * 109.47143 * 294.79609 * 3 2 1 5 5 N 1.46896 * 109.47571 * 54.80120 * 3 2 1 6 6 C 1.46897 * 111.00406 * 180.42392 * 5 3 2 7 7 C 1.50695 * 109.47227 * 173.46343 * 6 5 3 8 8 C 1.38301 * 119.93274 * 89.99934 * 7 6 5 9 9 C 1.38099 * 120.07026 * 180.02562 * 8 7 6 10 10 C 1.38883 * 119.92897 * 359.97438 * 9 8 7 11 11 O 1.35752 * 120.06529 * 180.02562 * 10 9 8 12 12 C 1.34824 * 117.00207 * 359.48079 * 11 10 9 13 13 H 1.07997 * 120.00281 * 355.08397 * 12 11 10 14 14 C 1.38657 * 119.99974 * 175.08647 * 12 11 10 15 15 N 1.31557 * 120.00085 * 0.02562 * 14 12 11 16 16 Si 1.86804 * 119.99968 * 179.97438 * 14 12 11 17 17 H 1.48500 * 109.47194 * 90.00081 * 16 14 12 18 18 H 1.48501 * 109.47085 * 209.99768 * 16 14 12 19 19 H 1.48497 * 109.47295 * 330.00049 * 16 14 12 20 20 C 1.38879 * 119.86421 * 0.26901 * 10 9 8 21 21 C 1.38102 * 119.92656 * 359.49876 * 20 10 9 22 22 C 1.53002 * 109.47061 * 174.79984 * 3 2 1 23 23 F 1.39899 * 109.46936 * 295.85070 * 22 3 2 24 24 F 1.39906 * 109.47261 * 55.84768 * 22 3 2 25 25 F 1.39897 * 109.47412 * 175.84874 * 22 3 2 26 26 H 1.09004 * 109.47726 * 306.71510 * 1 2 3 27 27 H 1.09001 * 109.47629 * 66.71897 * 1 2 3 28 28 H 1.09004 * 109.46951 * 186.71700 * 1 2 3 29 29 H 1.09004 * 109.47392 * 240.00351 * 2 1 3 30 30 H 1.08996 * 109.47323 * 119.99641 * 2 1 3 31 31 H 1.08998 * 109.47408 * 180.02562 * 4 3 2 32 32 H 1.09002 * 109.47664 * 300.00621 * 4 3 2 33 33 H 1.09006 * 109.47138 * 60.00087 * 4 3 2 34 34 H 1.00904 * 111.00227 * 56.45972 * 5 3 2 35 35 H 1.09001 * 109.46956 * 53.46246 * 6 5 3 36 36 H 1.08998 * 109.46973 * 293.46040 * 6 5 3 37 37 H 1.07996 * 119.96640 * 359.97438 * 8 7 6 38 38 H 1.08001 * 120.03546 * 179.97438 * 9 8 7 39 39 H 0.97003 * 119.99815 * 180.02562 * 15 14 12 40 40 H 1.07999 * 120.03624 * 179.72393 * 20 10 9 41 41 H 1.08001 * 119.96121 * 180.22384 * 21 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0398 1.4426 0.0000 4 6 1.6394 2.1250 -1.3095 5 7 1.4504 2.1704 1.1317 6 6 1.9107 3.5651 1.1579 7 6 1.1664 4.3197 2.2291 8 6 1.6722 4.3709 3.5153 9 6 0.9922 5.0612 4.4993 10 6 -0.2006 5.7048 4.1960 11 8 -0.8710 6.3845 5.1610 12 6 -0.3303 6.3870 6.3961 13 1 0.5521 5.7988 6.6005 14 6 -0.9072 7.1446 7.4040 15 7 -1.9824 7.8607 7.1552 16 14 -0.1584 7.1475 9.1154 17 1 0.8476 8.2354 9.2138 18 1 -1.2268 7.3686 10.1228 19 1 0.4994 5.8407 9.3701 20 6 -0.7085 5.6473 2.9047 21 6 -0.0213 4.9594 1.9240 22 6 3.5643 1.4447 0.1307 23 9 3.9267 0.9063 1.3701 24 9 4.1213 0.6722 -0.8941 25 9 4.0387 2.7573 0.0358 26 1 -0.3635 0.6144 0.8238 27 1 -0.3634 0.4062 -0.9440 28 1 -0.3633 -1.0207 0.1202 29 1 1.8933 -0.5138 -0.8900 30 1 1.8933 -0.5137 0.8900 31 1 2.0031 3.1526 -1.3097 32 1 2.0768 1.5850 -2.1493 33 1 0.5534 2.1236 -1.4027 34 1 1.6524 1.7064 2.0047 35 1 1.7219 4.0283 0.1894 36 1 2.9793 3.5911 1.3710 37 1 2.5995 3.8699 3.7506 38 1 1.3875 5.1005 5.5036 39 1 -2.3857 8.3910 7.8603 40 1 -1.6381 6.1430 2.6669 41 1 -0.4140 4.9173 0.9188 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000746483226.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:50:56 Heat of formation + Delta-G solvation = -157.778613 kcal Electronic energy + Delta-G solvation = -27058.087502 eV Core-core repulsion = 22716.636153 eV Total energy + Delta-G solvation = -4341.451349 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 317.134 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -50.36148 -47.84258 -47.78532 -39.21347 -38.37418 -36.54095 -33.24066 -32.21105 -30.25355 -30.08423 -28.79422 -26.92653 -25.55465 -24.34519 -23.50130 -21.96571 -20.48249 -20.27226 -18.64718 -18.48896 -18.03190 -17.81732 -17.05832 -15.91521 -15.57087 -15.14489 -14.56460 -14.52672 -14.48344 -14.27695 -14.17211 -13.95928 -13.92827 -13.77885 -13.66235 -13.42492 -13.40150 -12.71467 -12.70051 -12.66518 -12.43632 -12.18701 -12.08285 -11.72210 -11.52027 -11.28386 -11.04984 -11.01763 -10.76645 -10.62430 -10.60655 -10.42430 -9.35023 -8.86694 -8.72581 -8.17913 -7.19826 -6.46703 -4.05366 2.22250 2.24459 2.54571 3.11730 3.12816 3.17546 3.52981 3.69764 3.75916 3.95559 4.10721 4.48989 4.52676 4.63094 5.07549 5.10317 5.11828 5.19394 5.25733 5.30302 5.37519 5.38023 5.55561 5.67532 5.72820 5.75682 5.82326 5.86436 5.98052 6.20841 6.24243 6.41107 6.63783 6.71616 6.89829 6.99853 7.10356 7.25510 7.38627 7.43607 7.82135 7.98526 8.99081 9.69164 10.71297 Molecular weight = 317.13amu Principal moments of inertia in cm(-1) A = 0.023809 B = 0.002813 C = 0.002714 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1175.750217 B = 9949.810056 C =10313.970690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.114 4.114 3 C 0.080 3.920 4 C -0.148 4.148 5 N -0.651 5.651 6 C 0.092 3.908 7 C -0.184 4.184 8 C -0.063 4.063 9 C -0.235 4.235 10 C 0.157 3.843 11 O -0.177 6.177 12 C -0.392 4.392 13 H 0.092 0.908 14 C 0.040 3.960 15 N -0.862 5.862 16 Si 0.941 3.059 17 H -0.273 1.273 18 H -0.277 1.277 19 H -0.267 1.267 20 C -0.195 4.195 21 C -0.050 4.050 22 C 0.412 3.588 23 F -0.186 7.186 24 F -0.187 7.187 25 F -0.180 7.180 26 H 0.078 0.922 27 H 0.056 0.944 28 H 0.053 0.947 29 H 0.076 0.924 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.069 0.931 33 H 0.090 0.910 34 H 0.352 0.648 35 H 0.081 0.919 36 H 0.049 0.951 37 H 0.102 0.898 38 H 0.126 0.874 39 H 0.270 0.730 40 H 0.116 0.884 41 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.333 -14.062 -15.270 22.369 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.152 4.152 3 C -0.015 4.015 4 C -0.206 4.206 5 N -0.282 5.282 6 C -0.035 4.035 7 C -0.185 4.185 8 C -0.082 4.082 9 C -0.254 4.254 10 C 0.103 3.897 11 O -0.080 6.080 12 C -0.469 4.469 13 H 0.109 0.891 14 C -0.165 4.165 15 N -0.497 5.497 16 Si 0.765 3.235 17 H -0.199 1.199 18 H -0.202 1.202 19 H -0.192 1.192 20 C -0.214 4.214 21 C -0.069 4.069 22 C 0.355 3.645 23 F -0.167 7.167 24 F -0.169 7.169 25 F -0.161 7.161 26 H 0.097 0.903 27 H 0.075 0.925 28 H 0.072 0.928 29 H 0.095 0.905 30 H 0.089 0.911 31 H 0.090 0.910 32 H 0.088 0.912 33 H 0.109 0.891 34 H 0.172 0.828 35 H 0.100 0.900 36 H 0.067 0.933 37 H 0.120 0.880 38 H 0.144 0.856 39 H 0.080 0.920 40 H 0.134 0.866 41 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 7.392 -13.612 -15.442 21.872 hybrid contribution 1.778 -0.095 1.343 2.231 sum 9.170 -13.707 -14.099 21.697 Atomic orbital electron populations 1.21681 0.93064 1.01790 1.03438 1.21616 0.98818 0.91618 1.03181 1.22430 0.83546 0.98674 0.96806 1.22009 1.04417 1.01006 0.93127 1.60823 1.59139 1.03019 1.05179 1.21223 0.96959 0.86505 0.98823 1.19004 0.98854 1.06450 0.94209 1.20597 0.97999 0.97249 0.92384 1.21118 0.98152 1.05730 1.00416 1.19416 0.90288 0.90615 0.89401 1.83985 1.45021 1.61732 1.17250 1.21330 1.12895 1.29307 0.83321 0.89057 1.25291 0.96091 0.95395 0.99707 1.70039 1.18910 1.26776 1.33955 0.85717 0.78547 0.79051 0.80158 1.19870 1.20228 1.19182 1.20206 1.02597 1.07362 0.91279 1.20442 0.93513 0.95349 0.97615 1.22478 0.95081 0.73367 0.73567 1.93157 1.93528 1.86222 1.43834 1.93146 1.88034 1.75747 1.59928 1.93137 1.90735 1.36617 1.95604 0.90292 0.92510 0.92823 0.90508 0.91055 0.90995 0.91249 0.89117 0.82766 0.90036 0.93267 0.87963 0.85619 0.91993 0.86573 0.87097 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.13 9.40 37.15 0.35 -0.78 16 2 C -0.11 -0.92 4.82 -26.73 -0.13 -1.05 16 3 C 0.08 0.75 0.33 -131.60 -0.04 0.71 16 4 C -0.15 -1.22 7.75 37.16 0.29 -0.94 16 5 N -0.65 -7.29 4.91 -101.22 -0.50 -7.78 16 6 C 0.09 1.18 4.51 -4.98 -0.02 1.16 16 7 C -0.18 -3.01 5.45 -104.58 -0.57 -3.58 16 8 C -0.06 -1.14 9.69 -39.61 -0.38 -1.53 16 9 C -0.23 -5.05 9.16 -39.39 -0.36 -5.41 16 10 C 0.16 3.76 6.66 -39.11 -0.26 3.50 16 11 O -0.18 -5.03 9.76 0.06 0.00 -5.03 16 12 C -0.39 -10.93 9.48 30.89 0.29 -10.64 16 13 H 0.09 2.36 5.21 -52.49 -0.27 2.08 16 14 C 0.04 1.08 5.49 -17.51 -0.10 0.99 16 15 N -0.86 -25.21 13.67 55.48 0.76 -24.45 16 16 Si 0.94 20.45 29.55 -169.99 -5.02 15.43 16 17 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 18 H -0.28 -5.90 7.11 56.52 0.40 -5.49 16 19 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 20 C -0.20 -4.06 9.99 -39.39 -0.39 -4.46 16 21 C -0.05 -0.87 9.69 -39.61 -0.38 -1.26 16 22 C 0.41 4.44 2.15 37.16 0.08 4.52 16 23 F -0.19 -2.18 16.36 2.25 0.04 -2.14 16 24 F -0.19 -1.99 16.38 2.25 0.04 -1.95 16 25 F -0.18 -2.14 13.38 2.25 0.03 -2.11 16 26 H 0.08 0.76 7.24 -51.93 -0.38 0.38 16 27 H 0.06 0.42 6.91 -51.93 -0.36 0.06 16 28 H 0.05 0.38 8.14 -51.93 -0.42 -0.04 16 29 H 0.08 0.55 7.87 -51.93 -0.41 0.14 16 30 H 0.07 0.58 7.78 -51.93 -0.40 0.18 16 31 H 0.07 0.63 5.82 -51.93 -0.30 0.33 16 32 H 0.07 0.49 7.91 -51.93 -0.41 0.08 16 33 H 0.09 0.71 6.73 -51.93 -0.35 0.36 16 34 H 0.35 4.06 8.32 -39.29 -0.33 3.73 16 35 H 0.08 0.98 5.91 -51.93 -0.31 0.67 16 36 H 0.05 0.65 5.69 -51.93 -0.30 0.36 16 37 H 0.10 1.61 8.06 -52.49 -0.42 1.18 16 38 H 0.13 2.73 5.63 -52.49 -0.30 2.43 16 39 H 0.27 7.24 8.31 -40.82 -0.34 6.90 16 40 H 0.12 2.34 8.06 -52.49 -0.42 1.92 16 41 H 0.11 1.62 8.06 -52.49 -0.42 1.20 16 LS Contribution 341.55 15.07 5.15 5.15 Total: -1.00 -29.68 341.55 -6.08 -35.75 By element: Atomic # 1 Polarization: 10.82 SS G_CDS: -4.93 Total: 5.89 kcal Atomic # 6 Polarization: -17.13 SS G_CDS: -1.63 Total: -18.76 kcal Atomic # 7 Polarization: -32.49 SS G_CDS: 0.26 Total: -32.23 kcal Atomic # 8 Polarization: -5.03 SS G_CDS: 0.00 Total: -5.03 kcal Atomic # 9 Polarization: -6.30 SS G_CDS: 0.10 Total: -6.20 kcal Atomic # 14 Polarization: 20.45 SS G_CDS: -5.02 Total: 15.43 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -29.68 -6.08 -35.75 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000746483226.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.025 kcal (2) G-P(sol) polarization free energy of solvation -29.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.701 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.077 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.754 kcal (6) G-S(sol) free energy of system = (1) + (5) -157.779 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds