Wall clock time and date at job start Tue Mar 31 2020 11:25:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46897 * 110.99739 * 2 1 4 4 C 1.52996 * 109.47245 * 68.68200 * 3 2 1 5 5 C 1.52999 * 109.47397 * 179.97438 * 4 3 2 6 6 N 1.46505 * 109.47207 * 179.97438 * 5 4 3 7 7 C 1.38826 * 119.99804 * 180.02562 * 6 5 4 8 8 C 1.39795 * 119.58543 * 359.97438 * 7 6 5 9 9 C 1.38598 * 119.48871 * 180.02562 * 8 7 6 10 10 C 1.38382 * 118.68268 * 0.02562 * 9 8 7 11 11 C 1.40553 * 119.15034 * 359.97438 * 10 9 8 12 12 C 1.41317 * 119.78799 * 179.97438 * 11 10 9 13 13 H 1.08000 * 119.99560 * 0.02562 * 12 11 10 14 14 C 1.40028 * 120.00123 * 180.02562 * 12 11 10 15 15 N 1.30742 * 120.00264 * 0.02562 * 14 12 11 16 16 Si 1.86796 * 119.99730 * 180.02562 * 14 12 11 17 17 H 1.48501 * 109.47174 * 89.99781 * 16 14 12 18 18 H 1.48501 * 109.47328 * 209.99955 * 16 14 12 19 19 H 1.48505 * 109.47339 * 329.99852 * 16 14 12 20 20 N 1.31956 * 119.58112 * 179.73388 * 7 6 5 21 21 C 1.46899 * 110.99918 * 236.05037 * 2 1 3 22 22 C 1.53007 * 109.46927 * 201.01291 * 21 2 1 23 23 F 1.39900 * 109.47335 * 54.08222 * 22 21 2 24 24 F 1.39907 * 109.46967 * 174.08427 * 22 21 2 25 25 F 1.39901 * 109.46710 * 294.07727 * 22 21 2 26 26 H 1.08995 * 109.47050 * 64.49043 * 1 2 3 27 27 H 1.09002 * 109.46727 * 184.48887 * 1 2 3 28 28 H 1.09004 * 109.46864 * 304.48550 * 1 2 3 29 29 H 1.08994 * 109.47354 * 308.68071 * 3 2 1 30 30 H 1.09007 * 109.47065 * 188.67810 * 3 2 1 31 31 H 1.09002 * 109.47639 * 59.99522 * 4 3 2 32 32 H 1.09004 * 109.47154 * 300.00113 * 4 3 2 33 33 H 1.08995 * 109.47384 * 300.00045 * 5 4 3 34 34 H 1.09004 * 109.46957 * 59.99847 * 5 4 3 35 35 H 0.97000 * 120.00232 * 0.02562 * 6 5 4 36 36 H 1.07998 * 120.25333 * 359.97438 * 8 7 6 37 37 H 1.08001 * 120.65840 * 180.02562 * 9 8 7 38 38 H 1.08000 * 120.42829 * 179.97438 * 10 9 8 39 39 H 0.97002 * 120.00151 * 179.97438 * 15 14 12 40 40 H 1.08999 * 109.47118 * 321.00689 * 21 2 1 41 41 H 1.08994 * 109.47629 * 81.00803 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6886 2.0355 1.3438 5 6 2.2373 3.4637 1.3440 6 7 1.9430 4.0997 2.6306 7 6 2.3459 5.4070 2.8668 8 6 3.0324 6.1083 1.8712 9 6 3.4341 7.4132 2.1094 10 6 3.1412 7.9851 3.3350 11 6 2.4481 7.2284 4.2955 12 6 2.1425 7.7989 5.5517 13 1 2.4411 8.8134 5.7711 14 6 1.4526 7.0489 6.5121 15 7 1.0917 5.8206 6.2468 16 14 1.0481 7.8033 8.1724 17 1 -0.2765 8.4710 8.1031 18 1 1.0114 6.7367 9.2051 19 1 2.0878 8.8019 8.5289 20 7 2.0718 5.9737 4.0266 21 6 1.9954 -0.7659 -1.1376 22 6 3.4354 -1.1914 -0.8434 23 9 3.4801 -1.8731 0.3775 24 9 3.8909 -2.0326 -1.8642 25 9 4.2518 -0.0574 -0.7746 26 1 -0.3633 0.4426 -0.9274 27 1 -0.3633 -1.0246 0.0804 28 1 -0.3633 0.5819 0.8471 29 1 1.5260 1.9408 -0.8022 30 1 3.0741 1.3466 -0.1551 31 1 2.1579 1.4661 2.1461 32 1 0.6099 2.0603 1.4989 33 1 3.3159 3.4385 1.1891 34 1 1.7683 4.0333 0.5417 35 1 1.4666 3.6074 3.3173 36 1 3.2487 5.6366 0.9241 37 1 3.9652 7.9726 1.3535 38 1 3.4414 8.9999 3.5508 39 1 0.6141 5.3009 6.9122 40 1 1.3800 -1.6516 -1.2953 41 1 1.9757 -0.1456 -2.0336 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001255096767.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:25:55 Heat of formation + Delta-G solvation = -112.223628 kcal Electronic energy + Delta-G solvation = -25961.674170 eV Core-core repulsion = 21654.490984 eV Total energy + Delta-G solvation = -4307.183186 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 317.141 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.29996 -47.88262 -47.70478 -38.52108 -38.05583 -35.46791 -33.41066 -31.92706 -30.32888 -29.80022 -28.55996 -26.28380 -25.30304 -24.23443 -22.49045 -21.63569 -20.84541 -20.27468 -18.76493 -18.71473 -17.78100 -17.31769 -16.26250 -16.01762 -15.58103 -15.05893 -14.77631 -14.66194 -14.62193 -14.50040 -14.27563 -14.20817 -14.04498 -13.92471 -13.88564 -13.19448 -12.99771 -12.94315 -12.82479 -12.21487 -12.09210 -11.96432 -11.81368 -11.50378 -11.22947 -11.15811 -10.95841 -10.68375 -10.57616 -10.39299 -9.88766 -9.45214 -8.96281 -8.84848 -7.87699 -7.47742 -6.47811 -6.29671 -4.44322 2.43633 2.90377 3.12996 3.14115 3.16376 3.27045 3.33009 3.55024 3.73865 4.00745 4.09583 4.29332 4.60682 4.67785 4.81377 4.87389 4.93700 5.11051 5.20287 5.27333 5.42452 5.59576 5.65821 5.82145 6.05990 6.18193 6.18772 6.26084 6.40598 6.50291 6.61173 6.89349 6.92782 6.98270 7.28360 7.63235 7.84797 7.95276 8.20208 8.40223 8.72383 8.83717 9.15630 10.27993 10.43706 Molecular weight = 317.14amu Principal moments of inertia in cm(-1) A = 0.020838 B = 0.002409 C = 0.002288 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1343.347803 B =11617.999256 C =12235.667003 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.537 5.537 3 C 0.037 3.963 4 C -0.123 4.123 5 C 0.144 3.856 6 N -0.739 5.739 7 C 0.411 3.589 8 C -0.367 4.367 9 C -0.032 4.032 10 C -0.317 4.317 11 C 0.292 3.708 12 C -0.435 4.435 13 H 0.083 0.917 14 C 0.071 3.929 15 N -0.716 5.716 16 Si 0.905 3.095 17 H -0.270 1.270 18 H -0.277 1.277 19 H -0.262 1.262 20 N -0.532 5.532 21 C 0.009 3.991 22 C 0.457 3.543 23 F -0.172 7.172 24 F -0.187 7.187 25 F -0.180 7.180 26 H 0.033 0.967 27 H 0.072 0.928 28 H 0.084 0.916 29 H 0.045 0.955 30 H 0.094 0.906 31 H 0.078 0.922 32 H 0.069 0.931 33 H 0.051 0.949 34 H 0.048 0.952 35 H 0.395 0.605 36 H 0.089 0.911 37 H 0.092 0.908 38 H 0.094 0.906 39 H 0.269 0.731 40 H 0.117 0.883 41 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.421 -15.173 -13.706 20.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.260 5.260 3 C -0.091 4.091 4 C -0.162 4.162 5 C 0.018 3.982 6 N -0.376 5.376 7 C 0.171 3.829 8 C -0.393 4.393 9 C -0.057 4.057 10 C -0.340 4.340 11 C 0.165 3.835 12 C -0.467 4.467 13 H 0.101 0.899 14 C -0.154 4.154 15 N -0.338 5.338 16 Si 0.729 3.271 17 H -0.195 1.195 18 H -0.203 1.203 19 H -0.186 1.186 20 N -0.254 5.254 21 C -0.122 4.122 22 C 0.402 3.598 23 F -0.153 7.153 24 F -0.169 7.169 25 F -0.162 7.162 26 H 0.051 0.949 27 H 0.091 0.909 28 H 0.102 0.898 29 H 0.063 0.937 30 H 0.112 0.888 31 H 0.096 0.904 32 H 0.087 0.913 33 H 0.069 0.931 34 H 0.067 0.933 35 H 0.230 0.770 36 H 0.107 0.893 37 H 0.110 0.890 38 H 0.113 0.887 39 H 0.080 0.920 40 H 0.136 0.864 41 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -1.718 -16.054 -12.730 20.561 hybrid contribution 0.087 0.895 -0.442 1.002 sum -1.631 -15.160 -13.171 20.149 Atomic orbital electron populations 1.22492 0.85176 1.02914 1.01802 1.61772 1.09517 1.15016 1.39736 1.22519 1.02063 0.86549 0.97921 1.21709 1.01883 0.95414 0.97158 1.20930 0.99244 0.91172 0.86860 1.44093 1.65424 1.12153 1.15906 1.18523 0.89074 0.84705 0.90574 1.20604 1.19898 0.98014 1.00797 1.20593 0.95655 0.93910 0.95511 1.21530 1.14631 1.01018 0.96854 1.18204 0.86765 0.86501 0.92023 1.19576 1.30845 0.99722 0.96552 0.89919 1.26050 0.94667 0.94585 1.00090 1.70153 1.23440 1.07336 1.32846 0.86381 0.79659 0.79677 0.81356 1.19540 1.20258 1.18615 1.68218 1.27921 1.12484 1.16734 1.23210 0.91248 1.02309 0.95390 1.20530 0.89917 0.74963 0.74428 1.93213 1.96973 1.80238 1.44884 1.93184 1.90858 1.72577 1.60235 1.93121 1.76057 1.50924 1.96062 0.94876 0.90901 0.89770 0.93693 0.88767 0.90354 0.91284 0.93055 0.93338 0.76997 0.89252 0.88981 0.88734 0.91974 0.86435 0.89839 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.16 9.33 60.07 0.56 0.72 16 2 N -0.54 -4.68 4.49 -242.92 -1.09 -5.77 16 3 C 0.04 0.37 4.77 -3.83 -0.02 0.35 16 4 C -0.12 -1.47 5.32 -26.73 -0.14 -1.62 16 5 C 0.14 2.21 4.88 -4.04 -0.02 2.19 16 6 N -0.74 -14.91 5.72 -60.39 -0.35 -15.25 16 7 C 0.41 10.22 7.65 -155.32 -1.19 9.03 16 8 C -0.37 -8.63 9.34 -38.87 -0.36 -8.99 16 9 C -0.03 -0.76 10.15 -39.40 -0.40 -1.16 16 10 C -0.32 -8.18 9.83 -38.66 -0.38 -8.56 16 11 C 0.29 8.28 6.55 -85.00 -0.56 7.72 16 12 C -0.43 -11.95 9.14 -37.74 -0.34 -12.29 16 13 H 0.08 2.13 7.85 -52.49 -0.41 1.72 16 14 C 0.07 1.84 5.50 -17.34 -0.10 1.75 16 15 N -0.72 -19.23 11.46 55.55 0.64 -18.60 16 16 Si 0.90 18.92 29.56 -169.99 -5.02 13.90 16 17 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 18 H -0.28 -5.68 7.11 56.52 0.40 -5.27 16 19 H -0.26 -5.40 7.11 56.52 0.40 -5.00 16 20 N -0.53 -14.95 7.89 -10.33 -0.08 -15.03 16 21 C 0.01 0.06 5.12 -3.82 -0.02 0.04 16 22 C 0.46 4.17 3.28 37.16 0.12 4.30 16 23 F -0.17 -1.90 17.13 2.25 0.04 -1.86 16 24 F -0.19 -1.69 17.32 2.25 0.04 -1.65 16 25 F -0.18 -1.92 14.63 2.25 0.03 -1.89 16 26 H 0.03 0.20 8.14 -51.93 -0.42 -0.22 16 27 H 0.07 0.42 8.08 -51.93 -0.42 0.00 16 28 H 0.08 0.65 6.39 -51.93 -0.33 0.32 16 29 H 0.04 0.40 8.09 -51.93 -0.42 -0.02 16 30 H 0.09 0.99 5.29 -51.92 -0.27 0.72 16 31 H 0.08 1.01 8.14 -51.93 -0.42 0.59 16 32 H 0.07 0.79 6.55 -51.93 -0.34 0.45 16 33 H 0.05 0.81 7.92 -51.93 -0.41 0.39 16 34 H 0.05 0.74 7.92 -51.93 -0.41 0.33 16 35 H 0.40 7.94 8.59 -40.82 -0.35 7.59 16 36 H 0.09 1.86 6.68 -52.49 -0.35 1.51 16 37 H 0.09 1.86 8.06 -52.49 -0.42 1.44 16 38 H 0.09 2.26 8.06 -52.49 -0.42 1.84 16 39 H 0.27 6.56 8.29 -40.82 -0.34 6.22 16 40 H 0.12 0.56 7.87 -51.93 -0.41 0.15 16 41 H 0.08 0.46 7.98 -51.93 -0.41 0.04 16 LS Contribution 350.25 15.07 5.28 5.28 Total: -1.00 -31.02 350.25 -8.73 -39.76 By element: Atomic # 1 Polarization: 13.01 SS G_CDS: -5.37 Total: 7.64 kcal Atomic # 6 Polarization: -3.68 SS G_CDS: -2.85 Total: -6.53 kcal Atomic # 7 Polarization: -53.77 SS G_CDS: -0.88 Total: -54.65 kcal Atomic # 9 Polarization: -5.50 SS G_CDS: 0.11 Total: -5.39 kcal Atomic # 14 Polarization: 18.92 SS G_CDS: -5.02 Total: 13.90 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -31.02 -8.73 -39.76 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001255096767.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.467 kcal (2) G-P(sol) polarization free energy of solvation -31.024 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.491 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.756 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.224 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds