Wall clock time and date at job start Tue Mar 31 2020 11:40:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38291 * 119.96848 * 2 1 4 4 C 1.38250 * 120.10778 * 179.97438 * 3 2 1 5 5 C 1.38163 * 120.05485 * 359.76064 * 4 3 2 6 6 C 1.50697 * 120.02791 * 180.25332 * 5 4 3 7 7 C 1.38709 * 119.94229 * 0.53793 * 5 4 3 8 8 O 1.35907 * 120.05021 * 179.71984 * 7 5 4 9 9 C 1.42905 * 116.99836 * 179.72205 * 8 7 5 10 10 C 1.53000 * 109.47370 * 179.97438 * 9 8 7 11 11 C 1.52995 * 109.46846 * 179.97438 * 10 9 8 12 12 N 1.46903 * 109.46607 * 174.86202 * 11 10 9 13 13 C 1.46908 * 110.99958 * 75.75336 * 12 11 10 14 14 C 1.50695 * 109.47354 * 189.99839 * 13 12 11 15 15 H 1.07996 * 119.99740 * 359.97438 * 14 13 12 16 16 C 1.37876 * 119.99923 * 179.97438 * 14 13 12 17 17 N 1.31512 * 120.00154 * 359.97438 * 16 14 13 18 18 Si 1.86810 * 119.99811 * 179.97438 * 16 14 13 19 19 H 1.48503 * 109.47066 * 0.02562 * 18 16 14 20 20 H 1.48496 * 109.46783 * 119.99783 * 18 16 14 21 21 H 1.48500 * 109.46901 * 240.00347 * 18 16 14 22 22 C 1.46898 * 111.00009 * 199.70032 * 12 11 10 23 23 C 1.53001 * 109.47112 * 75.55328 * 22 12 11 24 24 C 1.52997 * 117.49978 * 243.46812 * 23 22 12 25 25 C 1.52994 * 117.50388 * 174.84303 * 23 22 12 26 26 C 1.38120 * 119.97320 * 180.02562 * 2 1 3 27 27 H 1.08996 * 109.46650 * 269.97702 * 1 2 3 28 28 H 1.08999 * 109.46997 * 29.98095 * 1 2 3 29 29 H 1.08995 * 109.47011 * 149.97838 * 1 2 3 30 30 H 1.07997 * 119.94999 * 359.97438 * 3 2 1 31 31 H 1.07998 * 119.97112 * 180.02562 * 4 3 2 32 32 H 1.08997 * 109.47752 * 270.27952 * 6 5 4 33 33 H 1.09004 * 109.47064 * 30.27917 * 6 5 4 34 34 H 1.08999 * 109.47327 * 150.27659 * 6 5 4 35 35 H 1.09006 * 109.47031 * 59.99978 * 9 8 7 36 36 H 1.09003 * 109.47346 * 300.00516 * 9 8 7 37 37 H 1.08997 * 109.47088 * 300.00064 * 10 9 8 38 38 H 1.08996 * 109.46568 * 60.00538 * 10 9 8 39 39 H 1.08996 * 109.47868 * 294.86176 * 11 10 9 40 40 H 1.09000 * 109.47190 * 54.86705 * 11 10 9 41 41 H 1.09004 * 109.46775 * 309.99814 * 13 12 11 42 42 H 1.09000 * 109.47080 * 69.99350 * 13 12 11 43 43 H 0.96996 * 119.99618 * 179.97438 * 17 16 14 44 44 H 1.08998 * 109.47378 * 195.54999 * 22 12 11 45 45 H 1.08998 * 109.47542 * 315.55184 * 22 12 11 46 46 H 1.09003 * 115.54521 * 29.16885 * 23 22 12 47 47 H 1.08999 * 117.49926 * 359.97438 * 24 23 22 48 48 H 1.08999 * 117.49964 * 145.01885 * 24 23 22 49 49 H 1.09001 * 117.50284 * 214.98309 * 25 23 22 50 50 H 1.09000 * 117.49673 * 359.97438 * 25 23 22 51 51 H 1.08000 * 120.02755 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1979 1.1980 0.0000 4 6 3.5804 1.2014 0.0005 5 6 4.2752 0.0072 0.0061 6 6 5.7822 0.0116 0.0124 7 6 3.5846 -1.1957 -0.0002 8 8 4.2659 -2.3717 -0.0005 9 6 3.4894 -3.5713 -0.0010 10 6 4.4232 -4.7833 -0.0019 11 6 3.5918 -6.0676 -0.0018 12 7 4.4836 -7.2282 -0.1267 13 6 5.1710 -7.5030 1.1422 14 6 6.2492 -8.5315 0.9171 15 1 6.4076 -8.9405 -0.0698 16 6 7.0333 -8.9503 1.9710 17 7 6.8406 -8.4518 3.1726 18 14 8.3693 -10.2258 1.6920 19 1 8.3825 -10.6241 0.2615 20 1 9.6882 -9.6489 2.0568 21 1 8.0997 -11.4177 2.5357 22 6 3.7469 -8.4105 -0.5930 23 6 3.4606 -8.2755 -2.0899 24 6 1.9959 -8.1941 -2.5244 25 6 2.8043 -9.4648 -2.7938 26 6 2.1971 -1.1965 -0.0005 27 1 -0.3632 -0.0004 1.0277 28 1 -0.3633 0.8901 -0.5135 29 1 -0.3633 -0.8898 -0.5141 30 1 1.6565 2.1325 -0.0004 31 1 4.1176 2.1382 0.0010 32 1 6.1499 0.0154 -1.0136 33 1 6.1407 0.9013 0.5302 34 1 6.1460 -0.8787 0.5254 35 1 2.8607 -3.5968 -0.8911 36 1 2.8605 -3.5974 0.8889 37 1 5.0517 -4.7570 -0.8921 38 1 5.0521 -4.7580 0.8879 39 1 3.0322 -6.1382 0.9309 40 1 2.8973 -6.0510 -0.8417 41 1 5.6190 -6.5835 1.5192 42 1 4.4532 -7.8822 1.8696 43 1 7.3920 -8.7468 3.9141 44 1 4.3453 -9.3043 -0.4168 45 1 2.8059 -8.4902 -0.0488 46 1 4.1871 -7.6933 -2.6568 47 1 1.2362 -8.2372 -1.7440 48 1 1.7585 -7.5584 -3.3774 49 1 3.0989 -9.6651 -3.8240 50 1 2.5769 -10.3437 -2.1906 51 1 1.6571 -2.1318 -0.0014 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000361446435.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:40:54 Heat of formation + Delta-G solvation = -6.423439 kcal Electronic energy + Delta-G solvation = -26048.910993 eV Core-core repulsion = 22527.545827 eV Total energy + Delta-G solvation = -3521.365167 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 317.210 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -40.31786 -38.09611 -37.61219 -35.74602 -33.94831 -32.83206 -31.71846 -29.95535 -29.31586 -27.44227 -26.59814 -24.90448 -24.07900 -22.60190 -22.09830 -21.55408 -20.99615 -20.17292 -19.63803 -17.52318 -16.56638 -16.18999 -16.07134 -15.62276 -15.35841 -14.91685 -14.35226 -14.25026 -14.10065 -13.97878 -13.71058 -13.46180 -13.26032 -13.09767 -12.96549 -12.69021 -12.44525 -11.97448 -11.82148 -11.77018 -11.61203 -11.48998 -11.33873 -11.31799 -11.15499 -10.96090 -10.88697 -10.74489 -10.64054 -10.52060 -10.22961 -10.10270 -9.60416 -9.48938 -9.14179 -8.79912 -8.43709 -8.08021 -7.28764 -6.03003 -4.03981 1.20318 1.38053 3.22613 3.30996 3.38728 3.43576 3.62560 4.11565 4.42492 4.59686 4.67293 4.75416 4.90055 5.03362 5.10101 5.11189 5.14628 5.23381 5.25329 5.33132 5.38203 5.40556 5.44103 5.48304 5.57351 5.61155 5.62549 5.69934 5.73714 5.79973 5.85938 5.86811 5.91269 6.06559 6.10891 6.20138 6.25491 6.31249 6.31589 6.40358 6.44927 6.48667 6.52618 6.66525 6.78410 6.81149 7.28180 7.33375 7.47815 7.81205 8.09285 8.19872 8.53886 9.04365 9.60363 11.07889 Molecular weight = 317.21amu Principal moments of inertia in cm(-1) A = 0.011422 B = 0.002818 C = 0.002395 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2450.916421 B = 9932.995734 C =11688.253419 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.055 4.055 3 C -0.162 4.162 4 C -0.082 4.082 5 C -0.126 4.126 6 C -0.105 4.105 7 C 0.140 3.860 8 O -0.308 6.308 9 C 0.063 3.937 10 C -0.111 4.111 11 C 0.062 3.938 12 N -0.533 5.533 13 C 0.191 3.809 14 C -0.507 4.507 15 H 0.065 0.935 16 C 0.055 3.945 17 N -0.898 5.898 18 Si 0.896 3.104 19 H -0.272 1.272 20 H -0.284 1.284 21 H -0.285 1.285 22 C 0.092 3.908 23 C -0.132 4.132 24 C -0.192 4.192 25 C -0.184 4.184 26 C -0.208 4.208 27 H 0.071 0.929 28 H 0.066 0.934 29 H 0.065 0.935 30 H 0.120 0.880 31 H 0.126 0.874 32 H 0.066 0.934 33 H 0.062 0.938 34 H 0.073 0.927 35 H 0.058 0.942 36 H 0.058 0.942 37 H 0.079 0.921 38 H 0.077 0.923 39 H 0.025 0.975 40 H 0.063 0.937 41 H 0.034 0.966 42 H -0.011 1.011 43 H 0.260 0.740 44 H 0.091 0.909 45 H 0.020 0.980 46 H 0.108 0.892 47 H 0.087 0.913 48 H 0.086 0.914 49 H 0.088 0.912 50 H 0.091 0.909 51 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.788 15.326 -8.258 21.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.056 4.056 3 C -0.180 4.180 4 C -0.100 4.100 5 C -0.126 4.126 6 C -0.162 4.162 7 C 0.094 3.906 8 O -0.221 6.221 9 C -0.012 4.012 10 C -0.149 4.149 11 C -0.066 4.066 12 N -0.257 5.257 13 C 0.066 3.934 14 C -0.545 4.545 15 H 0.083 0.917 16 C -0.146 4.146 17 N -0.538 5.538 18 Si 0.724 3.276 19 H -0.196 1.196 20 H -0.210 1.210 21 H -0.212 1.212 22 C -0.036 4.036 23 C -0.150 4.150 24 C -0.229 4.229 25 C -0.221 4.221 26 C -0.227 4.227 27 H 0.089 0.911 28 H 0.085 0.915 29 H 0.084 0.916 30 H 0.138 0.862 31 H 0.144 0.856 32 H 0.085 0.915 33 H 0.081 0.919 34 H 0.092 0.908 35 H 0.077 0.923 36 H 0.076 0.924 37 H 0.098 0.902 38 H 0.096 0.904 39 H 0.044 0.956 40 H 0.081 0.919 41 H 0.052 0.948 42 H 0.007 0.993 43 H 0.070 0.930 44 H 0.110 0.890 45 H 0.039 0.961 46 H 0.127 0.873 47 H 0.106 0.894 48 H 0.104 0.896 49 H 0.107 0.893 50 H 0.109 0.891 51 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -11.144 15.366 -8.411 20.762 hybrid contribution -0.187 -0.934 0.625 1.139 sum -11.331 14.432 -7.786 19.932 Atomic orbital electron populations 1.20801 0.91213 1.02724 1.02386 1.19673 0.95869 0.92566 0.97443 1.20859 0.94088 0.97310 1.05743 1.20833 0.93951 0.96730 0.98456 1.19293 0.96653 0.90373 1.06314 1.20606 0.90477 1.02869 1.02253 1.18877 0.90264 0.86085 0.95402 1.86105 1.35922 1.12201 1.87836 1.22879 0.94729 0.82788 1.00811 1.21490 0.98242 0.90452 1.04711 1.21843 0.94301 0.91224 0.99276 1.61975 1.27109 1.02770 1.33852 1.19789 0.92829 0.97082 0.83684 1.21204 1.16030 1.22221 0.95068 0.91723 1.24986 0.97627 0.96888 0.95095 1.69966 1.40196 1.43613 0.99989 0.86476 0.81716 0.81172 0.78284 1.19623 1.21016 1.21168 1.21575 0.96068 0.95426 0.90577 1.22467 0.94335 1.00836 0.97391 1.23017 0.95401 1.01332 1.03189 1.22891 1.05288 0.92722 1.01228 1.21146 0.92986 0.98932 1.09612 0.91065 0.91494 0.91556 0.86224 0.85620 0.91502 0.91932 0.90809 0.92336 0.92356 0.90198 0.90398 0.95647 0.91900 0.94803 0.99284 0.92998 0.89049 0.96134 0.87343 0.89443 0.89564 0.89308 0.89094 0.85449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.90 10.01 36.01 0.36 -0.54 16 2 C -0.06 -0.59 5.88 -104.64 -0.62 -1.21 16 3 C -0.16 -1.63 9.70 -39.56 -0.38 -2.02 16 4 C -0.08 -0.86 9.70 -39.60 -0.38 -1.25 16 5 C -0.13 -1.57 5.89 -104.48 -0.62 -2.18 16 6 C -0.11 -1.18 9.79 36.00 0.35 -0.83 16 7 C 0.14 1.92 6.66 -39.22 -0.26 1.66 16 8 O -0.31 -4.64 9.18 -19.45 -0.18 -4.82 16 9 C 0.06 0.87 4.74 37.16 0.18 1.05 16 10 C -0.11 -1.82 5.62 -26.73 -0.15 -1.97 16 11 C 0.06 1.07 4.81 -3.82 -0.02 1.06 16 12 N -0.53 -11.06 4.36 -236.07 -1.03 -12.09 16 13 C 0.19 4.86 4.55 -4.97 -0.02 4.84 16 14 C -0.51 -14.00 8.24 -34.44 -0.28 -14.28 16 15 H 0.06 1.78 7.31 -52.49 -0.38 1.40 16 16 C 0.06 1.56 5.46 -17.82 -0.10 1.46 16 17 N -0.90 -26.53 13.29 55.43 0.74 -25.79 16 18 Si 0.90 21.56 29.54 -169.99 -5.02 16.54 16 19 H -0.27 -6.42 7.11 56.52 0.40 -6.02 16 20 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 21 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 22 C 0.09 1.73 5.07 -3.82 -0.02 1.71 16 23 C -0.13 -2.05 5.15 -90.62 -0.47 -2.52 16 24 C -0.19 -2.49 10.09 -26.73 -0.27 -2.76 16 25 C -0.18 -2.45 10.25 -26.74 -0.27 -2.72 16 26 C -0.21 -2.54 8.69 -39.44 -0.34 -2.88 16 27 H 0.07 0.51 8.14 -51.93 -0.42 0.09 16 28 H 0.07 0.43 8.08 -51.93 -0.42 0.01 16 29 H 0.07 0.49 8.08 -51.93 -0.42 0.07 16 30 H 0.12 0.93 8.06 -52.49 -0.42 0.51 16 31 H 0.13 1.01 8.06 -52.49 -0.42 0.59 16 32 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 33 H 0.06 0.57 8.09 -51.93 -0.42 0.15 16 34 H 0.07 0.93 7.53 -51.93 -0.39 0.54 16 35 H 0.06 0.72 7.66 -51.93 -0.40 0.32 16 36 H 0.06 0.76 7.66 -51.93 -0.40 0.36 16 37 H 0.08 1.36 8.14 -51.93 -0.42 0.93 16 38 H 0.08 1.46 6.95 -51.93 -0.36 1.10 16 39 H 0.03 0.45 8.00 -51.93 -0.42 0.03 16 40 H 0.06 0.96 7.22 -51.93 -0.37 0.58 16 41 H 0.03 0.92 6.72 -51.93 -0.35 0.57 16 42 H -0.01 -0.29 8.12 -51.93 -0.42 -0.71 16 43 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 44 H 0.09 1.93 6.58 -51.93 -0.34 1.59 16 45 H 0.02 0.38 7.73 -51.93 -0.40 -0.02 16 46 H 0.11 1.77 8.14 -51.93 -0.42 1.35 16 47 H 0.09 1.11 8.03 -51.93 -0.42 0.69 16 48 H 0.09 1.00 8.14 -51.93 -0.42 0.58 16 49 H 0.09 1.06 8.14 -51.93 -0.42 0.64 16 50 H 0.09 1.19 8.14 -51.93 -0.42 0.77 16 51 H 0.13 1.41 6.30 -52.49 -0.33 1.08 16 LS Contribution 409.47 15.07 6.17 6.17 Total: -1.00 -29.95 409.47 -11.82 -41.77 By element: Atomic # 1 Polarization: 10.78 SS G_CDS: -9.18 Total: 1.60 kcal Atomic # 6 Polarization: -20.06 SS G_CDS: -3.32 Total: -23.38 kcal Atomic # 7 Polarization: -37.58 SS G_CDS: -0.29 Total: -37.88 kcal Atomic # 8 Polarization: -4.64 SS G_CDS: -0.18 Total: -4.82 kcal Atomic # 14 Polarization: 21.56 SS G_CDS: -5.02 Total: 16.54 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -29.95 -11.82 -41.77 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000361446435.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.342 kcal (2) G-P(sol) polarization free energy of solvation -29.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.396 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.765 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.423 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds