Wall clock time and date at job start Tue Mar 31 2020 11:41:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38150 * 120.02431 * 2 1 4 4 C 1.38272 * 120.05302 * 180.29877 * 3 2 1 5 5 C 1.38267 * 120.10929 * 359.67558 * 4 3 2 6 6 C 1.38140 * 120.05764 * 0.02562 * 5 4 3 7 7 C 1.50703 * 120.02949 * 179.97438 * 6 5 4 8 8 C 1.38729 * 120.03227 * 179.69833 * 2 1 3 9 9 O 1.35907 * 120.05101 * 0.02562 * 8 2 1 10 10 C 1.42896 * 116.99829 * 269.72159 * 9 8 2 11 11 C 1.52994 * 109.47540 * 180.02562 * 10 9 8 12 12 C 1.52991 * 109.47671 * 180.02562 * 11 10 9 13 13 N 1.46498 * 109.47373 * 179.97438 * 12 11 10 14 14 C 1.36933 * 120.00240 * 270.00099 * 13 12 11 15 15 H 1.07997 * 120.00637 * 142.01152 * 14 13 12 16 16 C 1.38820 * 119.99728 * 322.00793 * 14 13 12 17 17 N 1.31617 * 120.00002 * 156.08926 * 16 14 13 18 18 Si 1.86802 * 120.00010 * 336.09427 * 16 14 13 19 19 H 1.48507 * 109.46917 * 95.28647 * 18 16 14 20 20 H 1.48496 * 109.46914 * 215.28529 * 18 16 14 21 21 H 1.48502 * 109.47090 * 335.29092 * 18 16 14 22 22 C 1.46507 * 120.00087 * 89.99706 * 13 12 11 23 23 C 1.54266 * 110.03254 * 242.57987 * 22 13 12 24 24 C 1.54962 * 104.16081 * 217.13647 * 23 22 13 25 25 C 1.54889 * 102.77997 * 37.88795 * 24 23 22 26 26 C 1.53870 * 110.03320 * 125.36281 * 22 13 12 27 27 H 1.08996 * 109.47476 * 270.29680 * 1 2 3 28 28 H 1.08998 * 109.46850 * 30.30182 * 1 2 3 29 29 H 1.09003 * 109.46609 * 150.29493 * 1 2 3 30 30 H 1.08002 * 119.97675 * 359.97438 * 3 2 1 31 31 H 1.08002 * 119.94358 * 179.70072 * 4 3 2 32 32 H 1.08002 * 119.96988 * 180.02562 * 5 4 3 33 33 H 1.08996 * 109.47417 * 270.02643 * 7 6 5 34 34 H 1.09005 * 109.46690 * 30.02884 * 7 6 5 35 35 H 1.08999 * 109.46920 * 150.02226 * 7 6 5 36 36 H 1.09005 * 109.47382 * 59.99799 * 10 9 8 37 37 H 1.09005 * 109.46973 * 300.00324 * 10 9 8 38 38 H 1.09005 * 109.47220 * 59.99365 * 11 10 9 39 39 H 1.08999 * 109.47126 * 300.00389 * 11 10 9 40 40 H 1.08992 * 109.47577 * 59.99651 * 12 11 10 41 41 H 1.09005 * 109.46754 * 299.99935 * 12 11 10 42 42 H 0.96997 * 119.99896 * 180.02562 * 17 16 14 43 43 H 1.08997 * 110.01725 * 3.97135 * 22 13 12 44 44 H 1.08997 * 110.48506 * 335.78556 * 23 22 13 45 45 H 1.09006 * 110.48623 * 98.42714 * 23 22 13 46 46 H 1.09001 * 110.72050 * 279.57458 * 24 23 22 47 47 H 1.09003 * 110.92406 * 156.29988 * 24 23 22 48 48 H 1.08997 * 110.48998 * 203.40959 * 25 24 23 49 49 H 1.09000 * 110.59508 * 80.81413 * 25 24 23 50 50 H 1.09002 * 110.03461 * 238.57223 * 26 22 13 51 51 H 1.09004 * 110.03262 * 359.97438 * 26 22 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1961 0.0000 4 6 3.5810 1.1968 -0.0062 5 6 4.2752 0.0011 -0.0057 6 6 3.5886 -1.1976 0.0005 7 6 4.3460 -2.5005 0.0005 8 6 2.2013 -1.2010 0.0063 9 8 1.5235 -2.3790 0.0120 10 6 1.2049 -2.9379 1.2879 11 6 0.4482 -4.2534 1.0940 12 6 0.1064 -4.8515 2.4600 13 7 -0.6187 -6.1108 2.2742 14 6 -1.9853 -6.1079 2.1892 15 1 -2.4852 -6.7756 1.5032 16 6 -2.7284 -5.2467 2.9850 17 7 -3.9383 -4.8861 2.6130 18 14 -2.0110 -4.5994 4.5837 19 1 -1.3942 -3.2694 4.3468 20 1 -3.0910 -4.4713 5.5948 21 1 -0.9773 -5.5430 5.0802 22 6 0.1184 -7.3734 2.1792 23 6 -0.1114 -8.0168 0.7961 24 6 -0.1813 -9.5363 1.0917 25 6 -0.9444 -9.5886 2.4386 26 6 -0.4105 -8.3724 3.2232 27 1 -0.3634 0.0053 1.0276 28 1 -0.3633 0.8873 -0.5185 29 1 -0.3633 -0.8927 -0.5093 30 1 1.6583 2.1315 -0.0004 31 1 4.1196 2.1329 -0.0111 32 1 5.3552 0.0043 -0.0102 33 1 4.5243 -2.8171 -1.0271 34 1 5.3001 -2.3661 0.5101 35 1 3.7612 -3.2606 0.5186 36 1 0.5817 -2.2387 1.8456 37 1 2.1245 -3.1264 1.8419 38 1 1.0717 -4.9524 0.5365 39 1 -0.4714 -4.0653 0.5398 40 1 -0.5172 -4.1524 3.0171 41 1 1.0259 -5.0396 3.0145 42 1 -4.4573 -4.2841 3.1689 43 1 1.1824 -7.1970 2.3368 44 1 -1.0499 -7.6686 0.3647 45 1 0.7217 -7.7950 0.1290 46 1 0.8195 -9.9549 1.1983 47 1 -0.7362 -10.0593 0.3128 48 1 -0.7190 -10.5137 2.9691 49 1 -2.0180 -9.4956 2.2749 50 1 0.3970 -8.6814 3.8870 51 1 -1.2153 -7.9177 3.8009 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000523439149.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:41:28 Heat of formation + Delta-G solvation = -14.268064 kcal Electronic energy + Delta-G solvation = -27263.595297 eV Core-core repulsion = 23741.889961 eV Total energy + Delta-G solvation = -3521.705335 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 317.210 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -40.16372 -38.01585 -37.26637 -34.90185 -33.60636 -32.23337 -31.24215 -30.49437 -27.91653 -27.36802 -26.76593 -26.66651 -25.18321 -22.65661 -21.68661 -21.04809 -20.90246 -19.96618 -18.92783 -17.64471 -16.51964 -16.35913 -15.53217 -15.42315 -15.34819 -14.88273 -14.41089 -14.25515 -14.05453 -13.49694 -13.34201 -13.15106 -13.02255 -12.80694 -12.72214 -12.68436 -12.45219 -12.15765 -11.91582 -11.72753 -11.58377 -11.47118 -11.25560 -10.99389 -10.83999 -10.68042 -10.50276 -10.44744 -10.39581 -10.29980 -9.97981 -9.80144 -9.69739 -9.53224 -9.41551 -8.64472 -8.49952 -8.45440 -6.78352 -6.00235 -3.39637 1.18552 1.27011 3.28196 3.42558 3.45739 3.50635 4.00724 4.51774 4.72403 4.77039 4.88911 4.93512 5.17324 5.25165 5.33446 5.35740 5.36689 5.41333 5.48130 5.54404 5.58438 5.60791 5.64492 5.69606 5.76848 5.78473 5.87307 5.98898 6.05994 6.06780 6.19371 6.21557 6.26279 6.27783 6.35227 6.38426 6.39089 6.41872 6.44851 6.54383 6.57085 6.57738 6.74638 6.77195 6.82135 6.95944 7.03082 7.14122 7.19946 7.76187 8.07471 8.42972 9.02267 9.73112 10.14534 11.15390 Molecular weight = 317.21amu Principal moments of inertia in cm(-1) A = 0.014125 B = 0.003599 C = 0.003111 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1981.823699 B = 7778.897754 C = 8997.517831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.099 4.099 3 C -0.117 4.117 4 C -0.125 4.125 5 C -0.118 4.118 6 C -0.103 4.103 7 C -0.111 4.111 8 C 0.100 3.900 9 O -0.332 6.332 10 C 0.070 3.930 11 C -0.130 4.130 12 C 0.142 3.858 13 N -0.596 5.596 14 C -0.258 4.258 15 H 0.080 0.920 16 C 0.039 3.961 17 N -0.896 5.896 18 Si 0.867 3.133 19 H -0.288 1.288 20 H -0.302 1.302 21 H -0.268 1.268 22 C 0.173 3.827 23 C -0.134 4.134 24 C -0.123 4.123 25 C -0.117 4.117 26 C -0.133 4.133 27 H 0.070 0.930 28 H 0.065 0.935 29 H 0.078 0.922 30 H 0.123 0.877 31 H 0.121 0.879 32 H 0.122 0.878 33 H 0.071 0.929 34 H 0.063 0.937 35 H 0.071 0.929 36 H 0.049 0.951 37 H 0.045 0.955 38 H 0.062 0.938 39 H 0.079 0.921 40 H 0.054 0.946 41 H 0.037 0.963 42 H 0.262 0.738 43 H 0.050 0.950 44 H 0.078 0.922 45 H 0.048 0.952 46 H 0.054 0.946 47 H 0.054 0.946 48 H 0.048 0.952 49 H 0.065 0.935 50 H 0.043 0.957 51 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.814 5.882 -3.713 16.366 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.099 4.099 3 C -0.135 4.135 4 C -0.143 4.143 5 C -0.136 4.136 6 C -0.103 4.103 7 C -0.167 4.167 8 C 0.056 3.944 9 O -0.249 6.249 10 C -0.004 4.004 11 C -0.170 4.170 12 C 0.016 3.984 13 N -0.317 5.317 14 C -0.387 4.387 15 H 0.098 0.902 16 C -0.161 4.161 17 N -0.537 5.537 18 Si 0.697 3.303 19 H -0.216 1.216 20 H -0.230 1.230 21 H -0.193 1.193 22 C 0.066 3.934 23 C -0.174 4.174 24 C -0.161 4.161 25 C -0.155 4.155 26 C -0.172 4.172 27 H 0.089 0.911 28 H 0.084 0.916 29 H 0.097 0.903 30 H 0.141 0.859 31 H 0.139 0.861 32 H 0.140 0.860 33 H 0.090 0.910 34 H 0.082 0.918 35 H 0.089 0.911 36 H 0.067 0.933 37 H 0.064 0.936 38 H 0.080 0.920 39 H 0.097 0.903 40 H 0.072 0.928 41 H 0.056 0.944 42 H 0.072 0.928 43 H 0.068 0.932 44 H 0.097 0.903 45 H 0.066 0.934 46 H 0.073 0.927 47 H 0.073 0.927 48 H 0.067 0.933 49 H 0.084 0.916 50 H 0.062 0.938 51 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 14.570 5.840 -3.798 16.150 hybrid contribution 0.358 0.712 1.121 1.375 sum 14.928 6.552 -2.677 16.521 Atomic orbital electron populations 1.20742 0.90437 1.03374 1.02682 1.20311 0.96988 0.92503 1.00099 1.20927 0.94157 0.97094 1.01329 1.21084 0.94231 0.97896 1.01093 1.20883 0.99585 0.91559 1.01605 1.20244 0.93119 0.96164 1.00797 1.20704 0.99192 0.94234 1.02592 1.18451 0.89428 0.85698 1.00805 1.86041 1.74388 1.34241 1.30208 1.22877 0.98284 0.96010 0.83273 1.22210 1.00316 0.92862 1.01640 1.21070 0.94934 0.89071 0.93302 1.44247 1.03281 0.99116 1.85086 1.18616 0.79748 1.22622 1.17669 0.90213 1.25460 0.94924 0.98200 0.97528 1.69889 1.12016 1.34442 1.37364 0.87087 0.78333 0.78488 0.86394 1.21574 1.23008 1.19267 1.21057 0.93591 0.86214 0.92547 1.22840 1.01936 0.93898 0.98698 1.22434 0.99141 0.97206 0.97275 1.22241 1.00285 0.97228 0.95710 1.22534 1.00516 0.95697 0.98491 0.91148 0.91597 0.90332 0.85893 0.86069 0.85975 0.91003 0.91823 0.91056 0.93260 0.93634 0.91952 0.90256 0.92772 0.94437 0.92791 0.93152 0.90314 0.93362 0.92729 0.92705 0.93318 0.91605 0.93843 0.90129 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.54 9.79 36.01 0.35 -1.19 16 2 C -0.10 -1.37 5.89 -104.47 -0.62 -1.98 16 3 C -0.12 -1.36 9.70 -39.60 -0.38 -1.75 16 4 C -0.12 -1.33 10.04 -39.56 -0.40 -1.72 16 5 C -0.12 -1.32 9.70 -39.61 -0.38 -1.70 16 6 C -0.10 -1.34 5.89 -104.47 -0.62 -1.96 16 7 C -0.11 -1.25 9.79 36.01 0.35 -0.90 16 8 C 0.10 1.50 5.67 -39.22 -0.22 1.28 16 9 O -0.33 -5.52 8.32 -19.45 -0.16 -5.68 16 10 C 0.07 1.16 5.69 37.15 0.21 1.38 16 11 C -0.13 -2.44 5.91 -26.74 -0.16 -2.60 16 12 C 0.14 2.95 4.51 -4.05 -0.02 2.93 16 13 N -0.60 -13.36 2.02 -164.40 -0.33 -13.70 16 14 C -0.26 -6.79 8.19 -15.06 -0.12 -6.91 16 15 H 0.08 2.29 7.09 -52.49 -0.37 1.92 16 16 C 0.04 1.09 5.27 -17.43 -0.09 1.00 16 17 N -0.90 -26.56 13.97 55.49 0.78 -25.78 16 18 Si 0.87 21.53 25.19 -169.99 -4.28 17.25 16 19 H -0.29 -6.96 6.65 56.52 0.38 -6.59 16 20 H -0.30 -7.71 7.11 56.52 0.40 -7.31 16 21 H -0.27 -6.52 7.11 56.52 0.40 -6.12 16 22 C 0.17 3.33 3.42 -66.81 -0.23 3.10 16 23 C -0.13 -2.40 6.43 -25.03 -0.16 -2.56 16 24 C -0.12 -1.89 6.91 -24.70 -0.17 -2.06 16 25 C -0.12 -1.94 6.83 -25.07 -0.17 -2.11 16 26 C -0.13 -2.49 6.24 -25.61 -0.16 -2.65 16 27 H 0.07 0.94 8.14 -51.93 -0.42 0.52 16 28 H 0.07 0.73 8.09 -51.93 -0.42 0.31 16 29 H 0.08 1.16 7.53 -51.93 -0.39 0.77 16 30 H 0.12 1.16 8.06 -52.49 -0.42 0.73 16 31 H 0.12 0.96 8.06 -52.49 -0.42 0.53 16 32 H 0.12 1.06 8.06 -52.49 -0.42 0.63 16 33 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 34 H 0.06 0.59 8.09 -51.93 -0.42 0.17 16 35 H 0.07 0.88 6.33 -51.93 -0.33 0.55 16 36 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 37 H 0.05 0.69 7.26 -51.93 -0.38 0.31 16 38 H 0.06 1.12 8.14 -51.93 -0.42 0.70 16 39 H 0.08 1.69 8.14 -51.93 -0.42 1.27 16 40 H 0.05 1.24 3.44 -51.93 -0.18 1.06 16 41 H 0.04 0.70 7.91 -51.93 -0.41 0.29 16 42 H 0.26 7.43 8.31 -40.82 -0.34 7.09 16 43 H 0.05 0.90 7.81 -51.93 -0.41 0.49 16 44 H 0.08 1.62 6.65 -51.93 -0.35 1.28 16 45 H 0.05 0.79 8.14 -51.93 -0.42 0.37 16 46 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 47 H 0.05 0.79 8.14 -51.93 -0.42 0.37 16 48 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 49 H 0.07 1.19 8.14 -51.93 -0.42 0.76 16 50 H 0.04 0.73 8.14 -51.93 -0.42 0.30 16 51 H 0.08 1.76 7.17 -51.93 -0.37 1.39 16 LS Contribution 395.65 15.07 5.96 5.96 Total: -1.00 -29.04 395.65 -10.12 -39.16 By element: Atomic # 1 Polarization: 12.29 SS G_CDS: -9.10 Total: 3.19 kcal Atomic # 6 Polarization: -17.42 SS G_CDS: -2.99 Total: -20.40 kcal Atomic # 7 Polarization: -39.92 SS G_CDS: 0.44 Total: -39.48 kcal Atomic # 8 Polarization: -5.52 SS G_CDS: -0.16 Total: -5.68 kcal Atomic # 14 Polarization: 21.53 SS G_CDS: -4.28 Total: 17.25 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -29.04 -10.12 -39.16 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000523439149.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.894 kcal (2) G-P(sol) polarization free energy of solvation -29.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.125 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.162 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.268 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds