Wall clock time and date at job start Tue Mar 31 2020 11:46:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46907 * 1 3 3 C 1.46896 * 110.99805 * 2 1 4 4 C 1.50706 * 109.47293 * 293.95211 * 3 2 1 5 5 C 1.38288 * 119.96760 * 269.72532 * 4 3 2 6 6 C 1.38249 * 120.10643 * 179.76792 * 5 4 3 7 7 C 1.38171 * 120.05496 * 0.50533 * 6 5 4 8 8 C 1.38710 * 119.94136 * 359.75349 * 7 6 5 9 9 O 1.35903 * 120.05290 * 180.02562 * 8 7 6 10 10 C 1.42901 * 116.99821 * 359.97296 * 9 8 7 11 11 C 1.53002 * 109.46887 * 180.02562 * 10 9 8 12 12 C 1.50707 * 109.46913 * 179.97438 * 11 10 9 13 13 H 1.07999 * 119.99920 * 359.97438 * 12 11 10 14 14 C 1.37875 * 119.99688 * 179.97438 * 12 11 10 15 15 N 1.31518 * 120.00029 * 180.02562 * 14 12 11 16 16 Si 1.86801 * 120.00195 * 359.97438 * 14 12 11 17 17 H 1.48499 * 109.46780 * 90.00292 * 16 14 12 18 18 H 1.48500 * 109.47052 * 209.99869 * 16 14 12 19 19 H 1.48499 * 109.47083 * 330.00101 * 16 14 12 20 20 C 1.38118 * 119.97282 * 90.00131 * 4 3 2 21 21 C 1.46899 * 110.99769 * 123.95279 * 2 1 3 22 22 C 1.52997 * 109.47254 * 66.04707 * 21 2 1 23 23 H 1.09008 * 115.55245 * 29.41328 * 22 21 2 24 24 C 1.52998 * 117.50310 * 243.74634 * 22 21 2 25 25 C 1.52996 * 117.50163 * 175.08608 * 22 21 2 26 26 C 1.52998 * 117.50077 * 214.97904 * 25 22 21 27 27 C 1.52999 * 117.49754 * 0.02562 * 25 22 21 28 28 H 1.08995 * 109.47407 * 296.04618 * 1 2 3 29 29 H 1.09006 * 109.46770 * 56.04664 * 1 2 3 30 30 H 1.09003 * 109.46848 * 176.04346 * 1 2 3 31 31 H 1.09006 * 109.47466 * 53.95276 * 3 2 1 32 32 H 1.09000 * 109.46995 * 173.95474 * 3 2 1 33 33 H 1.07992 * 119.94987 * 0.02562 * 5 4 3 34 34 H 1.07999 * 119.97180 * 180.26326 * 6 5 4 35 35 H 1.07996 * 120.02515 * 179.72762 * 7 6 5 36 36 H 1.08997 * 109.47537 * 300.00113 * 10 9 8 37 37 H 1.09003 * 109.47379 * 60.00396 * 10 9 8 38 38 H 1.09005 * 109.47001 * 299.99561 * 11 10 9 39 39 H 1.08993 * 109.47091 * 60.00066 * 11 10 9 40 40 H 0.96996 * 120.00554 * 179.97438 * 15 14 12 41 41 H 1.08008 * 120.02718 * 359.96023 * 20 4 3 42 42 H 1.09002 * 109.47043 * 186.04778 * 21 2 1 43 43 H 1.09001 * 109.47354 * 306.04839 * 21 2 1 44 44 H 1.09000 * 117.49561 * 359.97438 * 24 22 21 45 45 H 1.09001 * 117.50251 * 144.99144 * 24 22 21 46 46 H 1.08998 * 109.47135 * 60.00007 * 26 25 22 47 47 H 1.09007 * 109.47401 * 179.97438 * 26 25 22 48 48 H 1.09002 * 109.47453 * 300.00020 * 26 25 22 49 49 H 1.08997 * 109.47131 * 59.99785 * 27 25 22 50 50 H 1.09004 * 109.47190 * 180.02562 * 27 25 22 51 51 H 1.09000 * 109.47123 * 300.00140 * 27 25 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6370 2.0471 -1.2985 5 6 2.4974 1.9693 -2.3783 6 6 2.1692 2.5841 -3.5723 7 6 0.9850 3.2867 -3.6862 8 6 0.1228 3.3707 -2.6029 9 8 -1.0429 4.0607 -2.7126 10 6 -1.3165 4.6757 -3.9731 11 6 -2.6617 5.4015 -3.9052 12 6 -2.9500 6.0506 -5.2344 13 1 -2.2441 5.9553 -6.0462 14 6 -4.1148 6.7660 -5.4139 15 7 -4.3667 7.3320 -6.5741 16 14 -5.3360 6.9301 -4.0099 17 1 -5.0106 8.1379 -3.2096 18 1 -6.7093 7.0565 -4.5606 19 1 -5.2589 5.7265 -3.1435 20 6 0.4520 2.7484 -1.4073 21 6 1.9955 -0.7660 1.1376 22 6 1.6315 -2.2426 0.9704 23 1 1.5340 -2.5892 -0.0585 24 6 0.7036 -2.8643 2.0160 25 6 2.1902 -3.2287 1.9981 26 6 2.5690 -4.6260 1.5032 27 6 3.0697 -2.6626 3.1148 28 1 -0.3634 0.4512 0.9232 29 1 -0.3633 0.5740 -0.8525 30 1 -0.3633 -1.0253 -0.0709 31 1 1.5611 1.9274 0.8309 32 1 3.0797 1.3444 0.1082 33 1 3.4253 1.4240 -2.2900 34 1 2.8408 2.5183 -4.4154 35 1 0.7311 3.7705 -4.6178 36 1 -0.5289 5.3921 -4.2065 37 1 -1.3543 3.9116 -4.7496 38 1 -3.4496 4.6853 -3.6717 39 1 -2.6234 6.1656 -3.1288 40 1 -5.1863 7.8350 -6.7006 41 1 -0.2179 2.8120 -0.5624 42 1 3.0797 -0.6611 1.1757 43 1 1.5611 -0.3872 2.0628 44 1 0.3529 -2.2215 2.8234 45 1 -0.0042 -3.6199 1.6751 46 1 3.3383 -4.5434 0.7355 47 1 2.9500 -5.2159 2.3369 48 1 1.6889 -5.1142 1.0845 49 1 2.4995 -1.9359 3.6933 50 1 3.3945 -3.4729 3.7675 51 1 3.9421 -2.1759 2.6787 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597253708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:46:59 Heat of formation + Delta-G solvation = -1.079630 kcal Electronic energy + Delta-G solvation = -25633.337585 eV Core-core repulsion = 22112.204144 eV Total energy + Delta-G solvation = -3521.133442 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 317.210 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -40.02190 -39.34327 -37.81447 -36.28244 -33.35653 -31.71052 -31.08862 -29.76515 -29.45248 -28.24002 -27.42611 -26.74535 -25.18461 -23.05382 -22.32785 -21.30400 -20.99091 -20.10408 -18.98336 -17.64361 -16.64907 -16.23026 -15.89781 -15.67561 -15.50968 -15.37012 -15.11928 -14.41958 -14.33229 -14.08672 -14.03094 -13.76735 -13.20281 -12.98383 -12.91495 -12.82598 -12.73743 -12.44730 -12.37836 -12.32001 -11.87546 -11.79508 -11.73598 -11.55661 -11.43408 -11.36678 -11.28370 -10.81885 -10.62930 -10.18933 -10.12413 -9.99611 -9.86594 -9.81629 -9.35406 -8.81925 -8.63363 -8.47857 -7.88305 -6.14450 -4.15401 1.40745 1.66718 3.27528 3.29909 3.34814 3.40217 3.61310 3.76096 4.07294 4.34183 4.37751 4.38062 4.55923 4.67848 4.74134 4.91758 4.99342 5.08920 5.13865 5.19595 5.23001 5.24575 5.30646 5.31179 5.38907 5.44895 5.47598 5.50022 5.52860 5.54789 5.57436 5.60316 5.64194 5.75664 5.79698 5.90188 5.91737 5.93130 5.96289 6.00641 6.14581 6.41296 6.51257 6.63916 6.68303 6.81789 6.83150 6.93064 7.11157 7.22148 7.61605 7.92177 8.37797 8.86237 9.45785 10.98047 Molecular weight = 317.21amu Principal moments of inertia in cm(-1) A = 0.021424 B = 0.002049 C = 0.001939 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1306.633886 B =13660.656475 C =14438.047204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 N -0.533 5.533 3 C 0.097 3.903 4 C -0.045 4.045 5 C -0.148 4.148 6 C -0.080 4.080 7 C -0.209 4.209 8 C 0.143 3.857 9 O -0.321 6.321 10 C 0.073 3.927 11 C -0.009 4.009 12 C -0.527 4.527 13 H 0.075 0.925 14 C 0.072 3.928 15 N -0.897 5.897 16 Si 0.881 3.119 17 H -0.275 1.275 18 H -0.286 1.286 19 H -0.263 1.263 20 C -0.156 4.156 21 C 0.088 3.912 22 C -0.135 4.135 23 H 0.112 0.888 24 C -0.175 4.175 25 C -0.128 4.128 26 C -0.114 4.114 27 C -0.115 4.115 28 H 0.024 0.976 29 H 0.077 0.923 30 H 0.069 0.931 31 H 0.043 0.957 32 H 0.083 0.917 33 H 0.118 0.882 34 H 0.121 0.879 35 H 0.130 0.870 36 H 0.056 0.944 37 H 0.057 0.943 38 H 0.027 0.973 39 H 0.023 0.977 40 H 0.266 0.734 41 H 0.123 0.877 42 H 0.077 0.923 43 H 0.034 0.966 44 H 0.091 0.909 45 H 0.092 0.908 46 H 0.060 0.940 47 H 0.058 0.942 48 H 0.056 0.944 49 H 0.055 0.945 50 H 0.059 0.941 51 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.486 -20.554 18.152 31.996 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 N -0.257 5.257 3 C -0.030 4.030 4 C -0.045 4.045 5 C -0.167 4.167 6 C -0.099 4.099 7 C -0.228 4.228 8 C 0.096 3.904 9 O -0.234 6.234 10 C -0.001 4.001 11 C -0.046 4.046 12 C -0.565 4.565 13 H 0.093 0.907 14 C -0.130 4.130 15 N -0.535 5.535 16 Si 0.707 3.293 17 H -0.201 1.201 18 H -0.212 1.212 19 H -0.188 1.188 20 C -0.175 4.175 21 C -0.040 4.040 22 C -0.153 4.153 23 H 0.130 0.870 24 C -0.212 4.212 25 C -0.129 4.129 26 C -0.171 4.171 27 C -0.172 4.172 28 H 0.042 0.958 29 H 0.095 0.905 30 H 0.087 0.913 31 H 0.061 0.939 32 H 0.101 0.899 33 H 0.136 0.864 34 H 0.139 0.861 35 H 0.148 0.852 36 H 0.075 0.925 37 H 0.075 0.925 38 H 0.046 0.954 39 H 0.041 0.959 40 H 0.076 0.924 41 H 0.141 0.859 42 H 0.095 0.905 43 H 0.052 0.948 44 H 0.109 0.891 45 H 0.111 0.889 46 H 0.079 0.921 47 H 0.078 0.922 48 H 0.075 0.925 49 H 0.074 0.926 50 H 0.078 0.922 51 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 16.342 -20.627 17.764 31.751 hybrid contribution -1.003 0.647 0.996 1.554 sum 15.339 -19.980 18.760 31.408 Atomic orbital electron populations 1.22503 0.86895 1.02450 1.01000 1.61958 1.08516 1.12701 1.42510 1.21012 1.00211 0.87891 0.93922 1.19326 0.93694 0.96298 0.95224 1.20760 1.00376 1.02576 0.92939 1.20908 0.95769 0.95815 0.97368 1.21407 0.96636 1.05415 0.99364 1.19090 0.86102 0.91408 0.93760 1.86114 1.34810 1.64164 1.38336 1.23070 1.00081 0.95426 0.81552 1.19585 0.90922 0.95549 0.98574 1.20844 1.06356 1.32775 0.96503 0.90737 1.24935 0.97709 0.94651 0.95723 1.69892 1.26036 1.34309 1.23307 0.86757 0.80504 0.79292 0.82711 1.20068 1.21159 1.18773 1.20256 0.98187 1.02342 0.96706 1.21653 0.99827 0.91281 0.91245 1.22427 1.03536 0.93185 0.96171 0.86971 1.23353 0.92425 1.03617 1.01809 1.21617 0.95478 0.96222 0.99542 1.21344 1.01437 0.93458 1.00892 1.21337 0.98929 1.00544 0.96424 0.95789 0.90468 0.91262 0.93911 0.89890 0.86354 0.86090 0.85173 0.92550 0.92505 0.95432 0.95875 0.92445 0.85904 0.90488 0.94766 0.89099 0.88927 0.92147 0.92249 0.92493 0.92558 0.92230 0.92149 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.20 9.02 60.07 0.54 0.74 16 2 N -0.53 -5.30 4.75 -244.36 -1.16 -6.46 16 3 C 0.10 0.97 5.12 -4.98 -0.03 0.94 16 4 C -0.04 -0.56 4.89 -104.64 -0.51 -1.07 16 5 C -0.15 -1.80 9.70 -39.56 -0.38 -2.18 16 6 C -0.08 -1.05 10.04 -39.60 -0.40 -1.44 16 7 C -0.21 -3.23 9.04 -39.43 -0.36 -3.59 16 8 C 0.14 2.42 6.69 -39.22 -0.26 2.15 16 9 O -0.32 -6.31 10.14 -19.44 -0.20 -6.50 16 10 C 0.07 1.51 4.68 37.16 0.17 1.68 16 11 C -0.01 -0.22 4.41 -27.88 -0.12 -0.34 16 12 C -0.53 -14.88 9.66 -34.44 -0.33 -15.22 16 13 H 0.07 2.22 7.99 -52.49 -0.42 1.80 16 14 C 0.07 2.08 5.47 -17.82 -0.10 1.99 16 15 N -0.90 -27.28 13.96 55.43 0.77 -26.50 16 16 Si 0.88 21.62 27.47 -169.99 -4.67 16.95 16 17 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 18 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 19 H -0.26 -6.28 6.54 56.52 0.37 -5.91 16 20 C -0.16 -2.26 7.84 -39.44 -0.31 -2.57 16 21 C 0.09 0.71 4.32 -3.83 -0.02 0.69 16 22 C -0.13 -1.04 4.52 -90.62 -0.41 -1.45 16 23 H 0.11 1.00 8.14 -51.92 -0.42 0.58 16 24 C -0.18 -1.24 9.47 -26.70 -0.25 -1.49 16 25 C -0.13 -0.86 2.70 -154.48 -0.42 -1.28 16 26 C -0.11 -0.68 9.85 37.16 0.37 -0.32 16 27 C -0.12 -0.67 8.86 37.16 0.33 -0.34 16 28 H 0.02 0.24 8.14 -51.93 -0.42 -0.19 16 29 H 0.08 0.93 5.89 -51.93 -0.31 0.63 16 30 H 0.07 0.67 7.28 -51.93 -0.38 0.30 16 31 H 0.04 0.42 8.06 -51.93 -0.42 0.00 16 32 H 0.08 0.71 7.87 -51.93 -0.41 0.30 16 33 H 0.12 1.20 8.06 -52.49 -0.42 0.77 16 34 H 0.12 1.28 8.06 -52.49 -0.42 0.86 16 35 H 0.13 2.00 6.30 -52.49 -0.33 1.67 16 36 H 0.06 1.13 7.66 -51.93 -0.40 0.73 16 37 H 0.06 1.14 7.66 -51.93 -0.40 0.74 16 38 H 0.03 0.68 7.20 -51.93 -0.37 0.30 16 39 H 0.02 0.56 7.57 -51.93 -0.39 0.16 16 40 H 0.27 7.54 8.31 -40.82 -0.34 7.20 16 41 H 0.12 1.70 7.98 -52.48 -0.42 1.28 16 42 H 0.08 0.58 7.56 -51.93 -0.39 0.19 16 43 H 0.03 0.28 7.85 -51.93 -0.41 -0.13 16 44 H 0.09 0.64 7.94 -51.93 -0.41 0.23 16 45 H 0.09 0.63 8.05 -51.93 -0.42 0.21 16 46 H 0.06 0.36 8.14 -51.93 -0.42 -0.06 16 47 H 0.06 0.31 7.92 -51.93 -0.41 -0.10 16 48 H 0.06 0.33 7.90 -51.93 -0.41 -0.08 16 49 H 0.06 0.33 7.90 -51.93 -0.41 -0.08 16 50 H 0.06 0.31 7.92 -51.93 -0.41 -0.10 16 51 H 0.06 0.34 7.83 -51.93 -0.41 -0.07 16 LS Contribution 404.55 15.07 6.10 6.10 Total: -1.00 -30.17 404.55 -10.85 -41.01 By element: Atomic # 1 Polarization: 7.70 SS G_CDS: -9.20 Total: -1.50 kcal Atomic # 6 Polarization: -20.60 SS G_CDS: -2.48 Total: -23.09 kcal Atomic # 7 Polarization: -32.58 SS G_CDS: -0.39 Total: -32.97 kcal Atomic # 8 Polarization: -6.31 SS G_CDS: -0.20 Total: -6.50 kcal Atomic # 14 Polarization: 21.62 SS G_CDS: -4.67 Total: 16.95 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -30.17 -10.85 -41.01 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597253708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.933 kcal (2) G-P(sol) polarization free energy of solvation -30.166 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.847 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds