Wall clock time and date at job start Tue Mar 31 2020 12:30:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 Cl 1.80299 * 109.47175 * 2 1 4 4 Cl 1.80298 * 109.46533 * 240.00375 * 2 1 3 5 5 C 1.50699 * 109.47248 * 120.00625 * 2 1 3 6 6 O 1.20826 * 120.00048 * 334.99400 * 5 2 1 7 7 O 1.34222 * 119.99750 * 154.99547 * 5 2 1 8 8 C 1.45206 * 116.99794 * 179.97438 * 7 5 2 9 9 C 1.50705 * 109.47089 * 180.02562 * 8 7 5 10 10 C 1.38303 * 119.92926 * 269.72838 * 9 8 7 11 11 C 1.38096 * 120.06672 * 179.72568 * 10 9 8 12 12 C 1.38883 * 119.93057 * 0.57051 * 11 10 9 13 13 O 1.35746 * 120.06682 * 179.68145 * 12 11 10 14 14 C 1.34835 * 116.99530 * 174.48501 * 13 12 11 15 15 H 1.07998 * 120.00101 * 5.06464 * 14 13 12 16 16 C 1.38651 * 119.99987 * 185.05345 * 14 13 12 17 17 N 1.31554 * 120.00527 * 180.02562 * 16 14 13 18 18 Si 1.86802 * 119.99862 * 0.02562 * 16 14 13 19 19 H 1.48499 * 109.47369 * 89.99533 * 18 16 14 20 20 H 1.48509 * 109.47079 * 209.99833 * 18 16 14 21 21 H 1.48505 * 109.47058 * 329.99271 * 18 16 14 22 22 C 1.38877 * 119.85730 * 359.70536 * 12 11 10 23 23 C 1.38098 * 119.93747 * 359.97438 * 22 12 11 24 24 H 1.09007 * 109.46649 * 299.99608 * 1 2 3 25 25 H 1.09004 * 109.47646 * 59.99173 * 1 2 3 26 26 H 1.08993 * 109.47619 * 180.02562 * 1 2 3 27 27 H 1.08994 * 109.47471 * 300.00140 * 8 7 5 28 28 H 1.08996 * 109.46725 * 60.00441 * 8 7 5 29 29 H 1.08001 * 119.96577 * 359.97438 * 10 9 8 30 30 H 1.08001 * 120.03322 * 180.27644 * 11 10 9 31 31 H 0.96993 * 120.00450 * 180.02562 * 17 16 14 32 32 H 1.08009 * 120.02807 * 179.97438 * 22 12 11 33 33 H 1.07998 * 119.96562 * 179.97438 * 23 22 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 17 2.1310 1.6999 0.0000 4 17 2.1308 -0.8499 -1.4722 5 6 2.0324 -0.7105 1.2304 6 8 1.3397 -0.7704 2.2186 7 8 3.2493 -1.2768 1.2284 8 6 3.6680 -1.9437 2.4484 9 6 5.0501 -2.5141 2.2602 10 6 5.2056 -3.8027 1.7826 11 6 6.4709 -4.3263 1.6036 12 6 7.5877 -3.5617 1.9150 13 8 8.8326 -4.0759 1.7463 14 6 9.8723 -3.2439 1.9580 15 1 9.6974 -2.2441 2.3268 16 6 11.1660 -3.6722 1.7025 17 7 12.1806 -2.8607 1.9096 18 14 11.4685 -5.4015 1.0642 19 1 11.4434 -5.3926 -0.4205 20 1 12.7944 -5.8777 1.5341 21 1 10.4083 -6.3090 1.5719 22 6 7.4280 -2.2701 2.3998 23 6 6.1602 -1.7498 2.5703 24 1 -0.3633 0.5138 0.8901 25 1 -0.3634 0.5140 -0.8899 26 1 -0.3634 -1.0276 0.0005 27 1 3.6801 -1.2263 3.2689 28 1 2.9707 -2.7488 2.6800 29 1 4.3367 -4.3987 1.5456 30 1 6.5917 -5.3311 1.2264 31 1 13.0856 -3.1602 1.7305 32 1 8.2946 -1.6731 2.6432 33 1 6.0355 -0.7456 2.9476 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000777223063.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:30:22 Heat of formation + Delta-G solvation = -101.061056 kcal Electronic energy + Delta-G solvation = -21051.693398 eV Core-core repulsion = 17323.449711 eV Total energy + Delta-G solvation = -3728.243687 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 318.026 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -40.87864 -39.30576 -37.58000 -37.09731 -36.48853 -36.34260 -32.63646 -32.51268 -30.86465 -30.37098 -26.85687 -25.51908 -24.32051 -22.23034 -21.07982 -20.64619 -18.42635 -18.03491 -17.52989 -17.36747 -16.92017 -15.66281 -15.02963 -14.90131 -14.53723 -14.14808 -13.94525 -13.90312 -13.27844 -13.20676 -12.82037 -12.78045 -12.64767 -12.33538 -12.27326 -12.01507 -11.61088 -11.52010 -11.33976 -11.20378 -11.09744 -10.92970 -10.82385 -10.67082 -10.58586 -10.23313 -9.49694 -8.97100 -8.39383 -7.52684 -6.51448 -4.18238 0.65861 0.97376 1.62913 2.02561 2.17792 2.41411 3.16572 3.20626 3.34205 3.62873 4.10884 4.15782 4.50651 4.71698 4.86653 4.91942 4.98199 5.00947 5.04907 5.35422 5.38832 5.51600 5.62102 6.00274 6.08254 6.18938 6.41541 6.64894 6.87672 7.07282 7.15608 7.23732 7.46980 7.69192 7.92369 8.82799 9.42705 10.55549 Molecular weight = 318.03amu Principal moments of inertia in cm(-1) A = 0.023548 B = 0.002736 C = 0.002704 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1188.776529 B =10231.711336 C =10352.379998 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.088 3.912 3 Cl -0.093 7.093 4 Cl -0.093 7.093 5 C 0.465 3.535 6 O -0.478 6.478 7 O -0.327 6.327 8 C 0.127 3.873 9 C -0.199 4.199 10 C -0.047 4.047 11 C -0.196 4.196 12 C 0.171 3.829 13 O -0.210 6.210 14 C -0.392 4.392 15 H 0.109 0.891 16 C 0.065 3.935 17 N -0.874 5.874 18 Si 0.906 3.094 19 H -0.272 1.272 20 H -0.281 1.281 21 H -0.259 1.259 22 C -0.225 4.225 23 C -0.043 4.043 24 H 0.099 0.901 25 H 0.096 0.904 26 H 0.093 0.907 27 H 0.076 0.924 28 H 0.076 0.924 29 H 0.115 0.885 30 H 0.121 0.879 31 H 0.281 0.719 32 H 0.137 0.863 33 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.351 4.794 -3.645 23.148 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C 0.035 3.965 3 Cl -0.066 7.066 4 Cl -0.066 7.066 5 C 0.304 3.696 6 O -0.366 6.366 7 O -0.242 6.242 8 C 0.055 3.945 9 C -0.200 4.200 10 C -0.066 4.066 11 C -0.215 4.215 12 C 0.118 3.882 13 O -0.114 6.114 14 C -0.467 4.467 15 H 0.126 0.874 16 C -0.139 4.139 17 N -0.511 5.511 18 Si 0.731 3.269 19 H -0.197 1.197 20 H -0.207 1.207 21 H -0.183 1.183 22 C -0.244 4.244 23 C -0.062 4.062 24 H 0.118 0.882 25 H 0.115 0.885 26 H 0.111 0.889 27 H 0.094 0.906 28 H 0.094 0.906 29 H 0.133 0.867 30 H 0.139 0.861 31 H 0.092 0.908 32 H 0.154 0.846 33 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -22.064 4.611 -3.494 22.810 hybrid contribution 0.502 -0.415 -0.246 0.696 sum -21.562 4.196 -3.740 22.282 Atomic orbital electron populations 1.22376 0.86008 1.05978 1.06111 1.26327 0.98446 0.84752 0.86999 1.98825 1.89983 1.19557 1.98263 1.98832 1.89873 1.77881 1.40057 1.22586 0.81534 0.77583 0.87889 1.90732 1.57080 1.55703 1.33063 1.86735 1.31026 1.63858 1.42589 1.21906 0.93913 0.95641 0.82998 1.18848 0.91967 0.95879 1.13317 1.20503 0.95994 0.94246 0.95842 1.20188 0.90332 1.01065 1.09918 1.19189 0.85450 0.91597 0.91990 1.83574 1.11489 1.39302 1.77007 1.20808 0.83212 0.97348 1.45356 0.87412 1.24494 0.93804 0.99642 0.95952 1.69636 0.99378 1.36112 1.45929 0.86174 0.78022 0.83103 0.79588 1.19734 1.20653 1.18274 1.21261 0.97797 0.97044 1.08323 1.20676 0.91635 0.97861 0.95987 0.88197 0.88533 0.88858 0.90590 0.90592 0.86664 0.86147 0.90845 0.84588 0.86973 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.00 8.25 37.16 0.31 -0.69 16 2 C 0.09 0.87 1.55 -27.88 -0.04 0.83 16 3 Cl -0.09 -0.95 28.18 -51.86 -1.46 -2.41 16 4 Cl -0.09 -0.99 27.74 -51.86 -1.44 -2.43 16 5 C 0.46 5.73 6.85 36.01 0.25 5.98 16 6 O -0.48 -6.39 15.84 -18.75 -0.30 -6.68 16 7 O -0.33 -4.55 9.62 -39.24 -0.38 -4.93 16 8 C 0.13 1.72 5.59 36.01 0.20 1.92 16 9 C -0.20 -3.21 5.52 -104.57 -0.58 -3.79 16 10 C -0.05 -0.77 9.69 -39.61 -0.38 -1.16 16 11 C -0.20 -3.71 9.99 -39.39 -0.39 -4.10 16 12 C 0.17 3.81 6.65 -39.11 -0.26 3.55 16 13 O -0.21 -5.36 8.59 0.04 0.00 -5.36 16 14 C -0.39 -10.75 9.95 30.89 0.31 -10.44 16 15 H 0.11 3.01 5.44 -52.49 -0.29 2.73 16 16 C 0.07 1.79 5.49 -17.52 -0.10 1.69 16 17 N -0.87 -24.68 13.96 55.48 0.77 -23.91 16 18 Si 0.91 21.11 28.62 -169.99 -4.86 16.24 16 19 H -0.27 -6.24 7.11 56.52 0.40 -5.84 16 20 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 21 H -0.26 -6.03 7.11 56.52 0.40 -5.63 16 22 C -0.23 -4.68 9.17 -39.40 -0.36 -5.04 16 23 C -0.04 -0.76 9.69 -39.61 -0.38 -1.14 16 24 H 0.10 0.66 7.87 -51.93 -0.41 0.25 16 25 H 0.10 0.47 8.14 -51.93 -0.42 0.05 16 26 H 0.09 0.56 8.14 -51.93 -0.42 0.14 16 27 H 0.08 0.96 8.08 -51.93 -0.42 0.54 16 28 H 0.08 0.92 8.07 -51.93 -0.42 0.50 16 29 H 0.12 1.53 8.06 -52.49 -0.42 1.11 16 30 H 0.12 2.11 8.06 -52.49 -0.42 1.68 16 31 H 0.28 7.33 8.31 -40.82 -0.34 6.99 16 32 H 0.14 2.97 5.64 -52.48 -0.30 2.67 16 33 H 0.11 1.70 8.06 -52.49 -0.42 1.28 16 LS Contribution 326.13 15.07 4.91 4.91 Total: -1.00 -29.14 326.13 -7.26 -36.40 By element: Atomic # 1 Polarization: 3.63 SS G_CDS: -3.08 Total: 0.56 kcal Atomic # 6 Polarization: -10.96 SS G_CDS: -1.44 Total: -12.40 kcal Atomic # 7 Polarization: -24.68 SS G_CDS: 0.77 Total: -23.91 kcal Atomic # 8 Polarization: -16.30 SS G_CDS: -0.67 Total: -16.97 kcal Atomic # 14 Polarization: 21.11 SS G_CDS: -4.86 Total: 16.24 kcal Atomic # 17 Polarization: -1.94 SS G_CDS: -2.90 Total: -4.84 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -29.14 -7.26 -36.40 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000777223063.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.656 kcal (2) G-P(sol) polarization free energy of solvation -29.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.405 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds