Wall clock time and date at job start Tue Mar 31 2020 11:30:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37918 * 119.91942 * 2 1 4 4 C 1.39678 * 119.87714 * 180.02562 * 3 2 1 5 5 C 1.47619 * 120.13468 * 179.97438 * 4 3 2 6 6 O 1.21516 * 120.00184 * 359.97438 * 5 4 3 7 7 O 1.34736 * 119.99974 * 180.02562 * 5 4 3 8 8 C 1.34863 * 116.99995 * 180.02562 * 7 5 4 9 9 H 1.07994 * 119.99486 * 359.97438 * 8 7 5 10 10 C 1.38805 * 119.99564 * 179.97438 * 8 7 5 11 11 N 1.31417 * 120.00670 * 359.97438 * 10 8 7 12 12 Si 1.86803 * 119.99671 * 179.97438 * 10 8 7 13 13 H 1.48503 * 109.46940 * 0.02562 * 12 10 8 14 14 H 1.48493 * 109.47188 * 120.00049 * 12 10 8 15 15 H 1.48501 * 109.47184 * 240.00214 * 12 10 8 16 16 C 1.39707 * 119.72922 * 359.97438 * 4 3 2 17 17 C 1.37974 * 119.83753 * 0.02562 * 16 4 3 18 18 Cl 1.73598 * 119.94158 * 179.97438 * 17 16 4 19 19 C 1.38445 * 119.91912 * 179.72198 * 2 1 3 20 20 Br 1.89101 * 119.86451 * 0.02562 * 19 2 1 21 21 H 1.09002 * 109.47152 * 90.00308 * 1 2 3 22 22 H 1.09001 * 109.46980 * 330.00409 * 1 2 3 23 23 H 1.09004 * 109.47113 * 210.00390 * 1 2 3 24 24 H 1.07995 * 120.05974 * 0.02562 * 3 2 1 25 25 H 0.96995 * 119.99732 * 179.97438 * 11 10 8 26 26 H 1.08000 * 120.07948 * 179.97438 * 16 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1949 1.1954 0.0000 4 6 3.5917 1.1943 -0.0005 5 6 4.3338 2.4705 -0.0011 6 8 3.7295 3.5247 -0.0016 7 8 5.6811 2.4663 -0.0022 8 6 6.2971 3.6660 -0.0021 9 1 5.7116 4.5735 -0.0017 10 6 7.6835 3.7343 -0.0026 11 7 8.3958 2.6300 -0.0026 12 14 8.5367 5.3961 -0.0032 13 1 7.5173 6.4759 -0.0025 14 1 9.3859 5.5169 1.2089 15 1 9.3851 5.5165 -1.2161 16 6 4.2836 -0.0194 -0.0005 17 6 3.5839 -1.2085 -0.0005 18 17 4.4409 -2.7182 -0.0012 19 6 2.1976 -1.1999 0.0058 20 35 1.2459 -2.8340 0.0130 21 1 -0.3633 -0.0001 -1.0277 22 1 -0.3633 0.8900 0.5138 23 1 -0.3633 -0.8900 0.5139 24 1 1.6546 2.1304 0.0004 25 1 9.3646 2.6778 -0.0034 26 1 5.3636 -0.0268 -0.0014 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000792486938.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:30:46 Heat of formation + Delta-G solvation = -65.452211 kcal Electronic energy + Delta-G solvation = -15921.895629 eV Core-core repulsion = 12844.935277 eV Total energy + Delta-G solvation = -3076.960352 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 317.944 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -39.84599 -38.54681 -36.49261 -35.30721 -33.22663 -32.29969 -31.86136 -29.52811 -27.11754 -25.69354 -23.43838 -21.95120 -20.10393 -17.91032 -17.26839 -16.18159 -15.66539 -15.19486 -14.81989 -14.53261 -14.35382 -14.13008 -13.33028 -12.87670 -12.73973 -12.44973 -11.90417 -11.69433 -11.48522 -11.47831 -11.25043 -11.01055 -10.91008 -10.50450 -10.49892 -10.04287 -9.98812 -9.27325 -8.76542 -8.68346 -8.64333 -6.61095 -4.22103 0.66242 1.18011 1.42821 2.13581 2.92184 3.10556 3.14959 3.18245 3.75941 4.02359 4.29983 4.59801 4.99072 5.00472 5.12846 5.31921 5.46578 5.51717 5.55680 5.83807 6.01487 6.14930 6.32993 6.63751 6.75637 7.22673 7.75802 8.52707 8.86826 9.63772 10.55658 Molecular weight = 317.94amu Principal moments of inertia in cm(-1) A = 0.028739 B = 0.003891 C = 0.003433 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 974.057300 B = 7194.324484 C = 8153.220581 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.059 4.059 3 C -0.066 4.066 4 C -0.051 4.051 5 C 0.424 3.576 6 O -0.549 6.549 7 O -0.198 6.198 8 C -0.371 4.371 9 H 0.102 0.898 10 C 0.042 3.958 11 N -0.850 5.850 12 Si 0.947 3.053 13 H -0.263 1.263 14 H -0.274 1.274 15 H -0.274 1.274 16 C -0.068 4.068 17 C -0.017 4.017 18 Cl -0.049 7.049 19 C -0.084 4.084 20 Br -0.036 7.036 21 H 0.079 0.921 22 H 0.076 0.924 23 H 0.077 0.923 24 H 0.149 0.851 25 H 0.274 0.726 26 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.929 -11.333 0.003 17.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.061 4.061 3 C -0.085 4.085 4 C -0.053 4.053 5 C 0.272 3.728 6 O -0.448 6.448 7 O -0.105 6.105 8 C -0.447 4.447 9 H 0.119 0.881 10 C -0.164 4.164 11 N -0.485 5.485 12 Si 0.771 3.229 13 H -0.187 1.187 14 H -0.199 1.199 15 H -0.199 1.199 16 C -0.088 4.088 17 C -0.046 4.046 18 Cl -0.020 7.020 19 C -0.164 4.164 20 Br 0.050 6.950 21 H 0.098 0.902 22 H 0.095 0.905 23 H 0.096 0.904 24 H 0.166 0.834 25 H 0.084 0.916 26 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -13.092 -11.893 0.007 17.687 hybrid contribution 0.881 0.927 -0.013 1.279 sum -12.210 -10.967 -0.006 16.412 Atomic orbital electron populations 1.20974 0.89423 1.03909 1.03358 1.19593 0.96848 0.90439 0.99210 1.21195 0.92557 0.98042 0.96740 1.19483 0.93154 0.91923 1.00714 1.20446 0.83134 0.87865 0.81326 1.90648 1.69623 1.32684 1.51813 1.83879 1.17123 1.35559 1.73910 1.21446 0.89326 0.82919 1.50982 0.88088 1.25451 0.95239 0.99813 0.95902 1.69978 1.06994 1.27389 1.44186 0.85547 0.79152 0.79896 0.78331 1.18699 1.19941 1.19934 1.21519 1.02097 0.88941 0.96241 1.20608 0.90408 0.88487 1.05104 1.98378 1.76759 1.30178 1.96709 1.21744 0.92354 0.92415 1.09914 1.96644 1.74348 1.26523 1.97479 0.90211 0.90509 0.90426 0.83364 0.91643 0.82217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.23 9.55 36.01 0.34 -0.88 15 2 C -0.06 -0.81 5.88 -104.66 -0.61 -1.43 15 3 C -0.07 -1.08 9.24 -39.16 -0.36 -1.44 15 4 C -0.05 -0.99 5.87 -104.98 -0.62 -1.61 15 5 C 0.42 10.40 7.83 34.56 0.27 10.67 15 6 O -0.55 -14.42 15.59 -19.28 -0.30 -14.72 15 7 O -0.20 -5.49 8.99 -21.67 -0.19 -5.68 15 8 C -0.37 -10.55 9.65 30.94 0.30 -10.25 15 9 H 0.10 2.88 6.86 -52.49 -0.36 2.52 15 10 C 0.04 1.13 5.50 -17.52 -0.10 1.03 15 11 N -0.85 -23.74 13.67 55.49 0.76 -22.98 15 12 Si 0.95 20.36 29.55 -169.99 -5.02 15.34 15 13 H -0.26 -5.58 7.11 56.52 0.40 -5.18 15 14 H -0.27 -5.71 7.11 56.52 0.40 -5.31 15 15 H -0.27 -5.71 7.11 56.52 0.40 -5.30 15 16 C -0.07 -1.24 9.39 -39.13 -0.37 -1.61 15 17 C -0.02 -0.27 6.31 -39.53 -0.25 -0.52 15 18 Cl -0.05 -0.72 27.72 -51.86 -1.44 -2.16 15 19 C -0.08 -1.20 6.23 -39.36 -0.25 -1.45 15 20 Br -0.04 -0.43 30.56 -68.01 -2.08 -2.51 15 21 H 0.08 0.73 8.14 -51.93 -0.42 0.30 15 22 H 0.08 0.69 8.08 -51.93 -0.42 0.27 15 23 H 0.08 0.74 6.61 -51.93 -0.34 0.39 15 24 H 0.15 2.30 7.65 -52.49 -0.40 1.90 15 25 H 0.27 6.96 8.31 -40.82 -0.34 6.62 15 26 H 0.16 3.09 7.61 -52.49 -0.40 2.69 15 LS Contribution 276.13 15.07 4.16 4.16 Total: -1.00 -29.87 276.13 -7.24 -37.11 By element: Atomic # 1 Polarization: 0.40 SS G_CDS: -1.48 Total: -1.08 kcal Atomic # 6 Polarization: -5.84 SS G_CDS: -1.64 Total: -7.48 kcal Atomic # 7 Polarization: -23.74 SS G_CDS: 0.76 Total: -22.98 kcal Atomic # 8 Polarization: -19.91 SS G_CDS: -0.50 Total: -20.40 kcal Atomic # 14 Polarization: 20.36 SS G_CDS: -5.02 Total: 15.34 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.44 Total: -2.16 kcal Atomic # 35 Polarization: -0.43 SS G_CDS: -2.08 Total: -2.51 kcal Total LS contribution 4.16 Total: 4.16 kcal Total: -29.87 -7.24 -37.11 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000792486938.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.346 kcal (2) G-P(sol) polarization free energy of solvation -29.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.217 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.106 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds