Wall clock time and date at job start Tue Mar 31 2020 12:40:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.43195 * 179.97438 * 2 1 4 4 C 1.43201 * 119.99769 * 6.97720 * 3 2 1 5 5 N 3.51033 * 140.68327 * 6.97745 * 2 1 3 6 6 C 1.41122 * 120.00275 * 186.98171 * 3 2 1 7 7 C 1.38951 * 119.99844 * 353.75784 * 6 3 2 8 8 H 1.07996 * 119.99456 * 336.44513 * 7 6 3 9 9 C 1.40859 * 119.99999 * 156.44447 * 7 6 3 10 10 N 1.30325 * 120.00215 * 357.57051 * 9 7 6 11 11 Si 1.86800 * 120.00193 * 177.57013 * 9 7 6 12 12 H 1.48500 * 109.47009 * 59.99882 * 11 9 7 13 13 H 1.48502 * 109.47385 * 179.97438 * 11 9 7 14 14 H 1.48502 * 109.46926 * 300.00312 * 11 9 7 15 15 N 1.38451 * 120.00344 * 173.75547 * 6 3 2 16 16 C 1.38502 * 119.99690 * 119.15552 * 15 6 3 17 17 N 1.32398 * 119.81104 * 5.47390 * 16 15 6 18 18 C 1.31840 * 121.79511 * 179.97438 * 17 16 15 19 19 C 1.38505 * 121.20857 * 0.02562 * 18 17 16 20 20 Cl 1.73607 * 120.25864 * 180.02562 * 19 18 17 21 21 C 1.38404 * 119.48313 * 0.02562 * 19 18 17 22 22 C 1.40040 * 118.35076 * 359.97438 * 21 19 18 23 23 C 1.47321 * 120.60971 * 180.02562 * 22 21 19 24 24 O 1.21516 * 119.99847 * 176.93171 * 23 22 21 25 25 O 1.34759 * 119.99692 * 356.94036 * 23 22 21 26 26 H 0.97001 * 119.99993 * 185.02419 * 10 9 7 27 27 H 0.96997 * 120.00404 * 299.15644 * 15 6 3 28 28 H 1.08002 * 119.38847 * 180.28674 * 18 17 16 29 29 H 1.08004 * 120.82747 * 179.97438 * 21 19 18 30 30 H 0.96708 * 116.99746 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2845 -1.2300 -0.1507 5 7 3.8518 -2.2077 -0.2702 6 6 3.2731 1.2140 0.1486 7 6 2.5840 2.4205 0.1645 8 1 1.6113 2.4929 -0.2991 9 6 3.1542 3.5491 0.7854 10 7 4.3065 3.4499 1.3859 11 14 2.2586 5.1879 0.7479 12 1 0.9364 5.0447 1.4086 13 1 3.0629 6.2082 1.4673 14 1 2.0641 5.6136 -0.6614 15 7 4.6515 1.2023 0.2784 16 6 5.4407 1.8496 -0.6577 17 7 4.8726 2.5687 -1.6132 18 6 5.5860 3.2013 -2.5238 19 6 6.9697 3.1404 -2.5212 20 17 7.8847 3.9836 -3.7318 21 6 7.6172 2.4021 -1.5459 22 6 6.8399 1.7384 -0.5886 23 6 7.4773 0.9390 0.4721 24 8 6.7954 0.4135 1.3297 25 8 8.8165 0.7909 0.4914 26 1 4.6650 4.2067 1.8755 27 1 5.0644 0.7409 1.0250 28 1 5.0822 3.7809 -3.2832 29 1 8.6951 2.3394 -1.5235 30 1 9.1890 0.2578 1.2072 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001169080531.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:40:51 Heat of formation + Delta-G solvation = 5.924033 kcal Electronic energy + Delta-G solvation = -23439.753538 eV Core-core repulsion = 19647.334330 eV Total energy + Delta-G solvation = -3792.419208 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 318.031 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -40.75049 -39.24108 -37.49013 -36.31595 -36.00622 -35.19120 -34.69179 -33.62299 -32.46674 -31.26343 -28.76936 -27.14366 -25.01322 -23.45546 -21.62521 -21.28519 -19.13071 -18.10186 -17.55230 -17.38737 -17.19433 -16.37869 -15.95377 -15.54480 -15.13688 -14.79417 -14.15865 -13.88042 -13.67360 -12.92894 -12.83133 -12.72518 -12.59356 -12.31400 -12.11760 -11.81243 -11.69947 -11.57440 -11.51163 -11.47256 -11.13168 -11.03515 -10.89671 -10.70039 -10.56187 -10.08560 -9.90543 -9.74951 -9.26036 -8.26524 -7.81578 -7.11517 -5.43216 0.78868 1.42135 2.19134 2.25657 2.69548 2.72105 2.73593 2.88697 3.10387 3.39382 3.67241 3.88833 4.05697 4.06875 4.25972 4.33037 4.71142 4.85840 5.07292 5.12460 5.19348 5.56483 5.66503 5.80433 5.98084 6.20057 6.31378 6.38557 6.56737 7.04385 7.23123 7.58588 7.71982 7.84809 8.00614 8.19790 8.65396 8.96925 9.13677 9.20010 Molecular weight = 318.03amu Principal moments of inertia in cm(-1) A = 0.010249 B = 0.006274 C = 0.004998 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2731.399412 B = 4461.448006 C = 5601.066702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.532 5.532 2 C 0.327 3.673 3 C -0.307 4.307 4 C 0.307 3.693 5 N -0.531 5.531 6 C 0.365 3.635 7 C -0.341 4.341 8 H 0.112 0.888 9 C 0.075 3.925 10 N -0.733 5.733 11 Si 0.929 3.071 12 H -0.253 1.253 13 H -0.270 1.270 14 H -0.248 1.248 15 N -0.602 5.602 16 C 0.503 3.497 17 N -0.500 5.500 18 C 0.209 3.791 19 C -0.186 4.186 20 Cl -0.074 7.074 21 C 0.036 3.964 22 C -0.258 4.258 23 C 0.544 3.456 24 O -0.514 6.514 25 O -0.514 6.514 26 H 0.302 0.698 27 H 0.427 0.573 28 H 0.166 0.834 29 H 0.149 0.851 30 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.281 8.709 -2.982 14.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.214 5.214 2 C 0.019 3.981 3 C -0.326 4.326 4 C 0.000 4.000 5 N -0.214 5.214 6 C 0.262 3.738 7 C -0.368 4.368 8 H 0.130 0.870 9 C -0.155 4.155 10 N -0.352 5.352 11 Si 0.751 3.249 12 H -0.177 1.177 13 H -0.195 1.195 14 H -0.172 1.172 15 N -0.231 5.231 16 C 0.263 3.737 17 N -0.216 5.216 18 C 0.042 3.958 19 C -0.218 4.218 20 Cl -0.045 7.045 21 C 0.010 3.990 22 C -0.268 4.268 23 C 0.390 3.610 24 O -0.403 6.403 25 O -0.326 6.326 26 H 0.113 0.887 27 H 0.279 0.721 28 H 0.183 0.817 29 H 0.167 0.833 30 H 0.270 0.730 Dipole moment (debyes) X Y Z Total from point charges 9.300 7.419 -3.128 12.301 hybrid contribution 1.468 0.707 0.864 1.844 sum 10.768 8.126 -2.264 13.679 Atomic orbital electron populations 1.81056 1.12113 1.08972 1.19260 1.24596 0.91191 0.92004 0.90277 1.12813 0.83134 0.86638 1.49971 1.25240 0.92518 0.91900 0.90389 1.81077 1.09651 1.11129 1.19510 1.16827 0.80140 0.90911 0.85902 1.20195 1.02815 0.91987 1.21839 0.86984 1.26569 0.94134 1.02469 0.92337 1.69496 1.14202 1.34536 1.17002 0.85925 0.80369 0.77585 0.81044 1.17676 1.19488 1.17193 1.42593 1.04873 1.50326 1.25321 1.17986 0.85217 0.84403 0.86094 1.67812 1.37452 1.11551 1.04768 1.22806 0.88515 0.91144 0.93291 1.21451 0.93261 1.08506 0.98559 1.98330 1.74196 1.77043 1.54974 1.21358 1.00447 0.88478 0.88679 1.18986 0.92212 1.12900 1.02677 1.20376 0.79881 0.77443 0.83313 1.90606 1.63124 1.47622 1.38996 1.84538 1.23139 1.69783 1.55099 0.88651 0.72139 0.81726 0.83327 0.72963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.53 -12.75 18.54 41.84 0.78 -11.97 16 2 C 0.33 7.62 14.00 -22.47 -0.31 7.31 16 3 C -0.31 -6.98 5.88 -104.95 -0.62 -7.60 16 4 C 0.31 7.26 14.83 -22.45 -0.33 6.92 16 5 N -0.53 -13.01 18.54 41.86 0.78 -12.23 16 6 C 0.37 7.89 5.53 -83.52 -0.46 7.43 16 7 C -0.34 -7.07 7.53 -38.33 -0.29 -7.36 16 8 H 0.11 2.33 7.19 -52.49 -0.38 1.95 16 9 C 0.08 1.43 4.93 -17.20 -0.08 1.34 16 10 N -0.73 -14.08 10.85 55.60 0.60 -13.48 16 11 Si 0.93 14.84 29.57 -169.99 -5.03 9.81 16 12 H -0.25 -4.15 7.11 56.52 0.40 -3.75 16 13 H -0.27 -4.19 7.11 56.52 0.40 -3.79 16 14 H -0.25 -3.94 7.11 56.52 0.40 -3.54 16 15 N -0.60 -12.40 3.14 -9.54 -0.03 -12.43 16 16 C 0.50 9.44 6.01 -154.98 -0.93 8.50 16 17 N -0.50 -8.95 8.46 -12.12 -0.10 -9.05 16 18 C 0.21 3.01 10.96 -17.45 -0.19 2.82 16 19 C -0.19 -2.46 6.33 -39.42 -0.25 -2.71 16 20 Cl -0.07 -0.83 28.98 -51.86 -1.50 -2.33 16 21 C 0.04 0.50 9.53 -38.85 -0.37 0.13 16 22 C -0.26 -4.23 5.91 -104.67 -0.62 -4.85 16 23 C 0.54 8.61 8.26 34.42 0.28 8.89 16 24 O -0.51 -9.55 14.44 -19.28 -0.28 -9.83 16 25 O -0.51 -5.92 12.76 -40.65 -0.52 -6.44 16 26 H 0.30 5.30 8.29 -40.82 -0.34 4.97 16 27 H 0.43 9.11 5.32 -40.94 -0.22 8.89 16 28 H 0.17 1.90 8.06 -52.49 -0.42 1.48 16 29 H 0.15 1.68 7.70 -52.48 -0.40 1.28 16 30 H 0.41 2.88 9.11 45.56 0.42 3.30 16 LS Contribution 311.96 15.07 4.70 4.70 Total: -1.00 -26.71 311.96 -4.92 -31.63 By element: Atomic # 1 Polarization: 10.93 SS G_CDS: -0.14 Total: 10.79 kcal Atomic # 6 Polarization: 25.02 SS G_CDS: -4.18 Total: 20.84 kcal Atomic # 7 Polarization: -61.19 SS G_CDS: 2.02 Total: -59.17 kcal Atomic # 8 Polarization: -15.47 SS G_CDS: -0.80 Total: -16.27 kcal Atomic # 14 Polarization: 14.84 SS G_CDS: -5.03 Total: 9.81 kcal Atomic # 17 Polarization: -0.83 SS G_CDS: -1.50 Total: -2.33 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -26.71 -4.92 -31.63 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001169080531.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.556 kcal (2) G-P(sol) polarization free energy of solvation -26.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.843 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.919 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.632 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds