Wall clock time and date at job start Tue Mar 31 2020 12:34:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 O 1.21288 * 120.00413 * 2 1 4 4 N 1.34785 * 119.99843 * 179.97438 * 2 1 3 5 5 C 1.39964 * 120.00167 * 175.43910 * 4 2 1 6 6 C 1.38921 * 120.02059 * 35.37843 * 5 4 2 7 7 C 1.38169 * 120.08559 * 180.02562 * 6 5 4 8 8 C 1.38247 * 120.12988 * 0.02562 * 7 6 5 9 9 Cl 1.73602 * 119.97875 * 179.97438 * 8 7 6 10 10 C 1.39026 * 120.04469 * 359.97438 * 8 7 6 11 11 N 1.39742 * 120.04451 * 179.97438 * 10 8 7 12 12 S 1.65599 * 120.00248 * 148.37809 * 11 10 8 13 13 O 1.42098 * 106.40147 * 314.45650 * 12 11 10 14 14 O 1.42101 * 106.40373 * 181.53455 * 12 11 10 15 15 C 1.76201 * 107.21809 * 67.99530 * 12 11 10 16 16 H 1.08006 * 119.99980 * 359.97438 * 15 12 11 17 17 C 1.37875 * 120.00213 * 180.02562 * 15 12 11 18 18 N 1.31513 * 120.00050 * 359.97438 * 17 15 12 19 19 Si 1.86803 * 120.00076 * 179.97438 * 17 15 12 20 20 H 1.48506 * 109.47158 * 89.99861 * 19 17 15 21 21 H 1.48500 * 109.47117 * 209.99706 * 19 17 15 22 22 H 1.48501 * 109.47253 * 330.00196 * 19 17 15 23 23 C 1.38732 * 120.02386 * 215.65824 * 5 4 2 24 24 H 1.08991 * 109.47203 * 240.00107 * 1 2 3 25 25 H 1.09000 * 109.46702 * 0.02562 * 1 2 3 26 26 H 1.08999 * 109.46782 * 119.99499 * 1 2 3 27 27 H 0.96995 * 119.99555 * 355.43959 * 4 2 1 28 28 H 1.08008 * 119.96167 * 0.02562 * 6 5 4 29 29 H 1.07994 * 119.93709 * 179.97438 * 7 6 5 30 30 H 0.96995 * 119.99961 * 328.38123 * 11 10 8 31 31 H 0.96999 * 120.00105 * 179.97438 * 18 17 15 32 32 H 1.07997 * 120.06797 * 359.97438 * 23 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1135 1.0503 0.0000 4 7 2.1809 -1.1673 0.0005 5 6 3.5772 -1.1693 -0.0959 6 6 4.3173 -0.1624 0.5110 7 6 5.6957 -0.1628 0.4163 8 6 6.3429 -1.1645 -0.2829 9 17 8.0750 -1.1608 -0.4000 10 6 5.6076 -2.1748 -0.8924 11 7 6.2618 -3.1871 -1.5996 12 16 5.6164 -4.7112 -1.6513 13 8 5.2269 -5.0274 -0.3218 14 8 6.5220 -5.5051 -2.4056 15 6 4.1317 -4.6171 -2.5956 16 1 3.8140 -3.6715 -3.0094 17 6 3.3751 -5.7505 -2.8054 18 7 3.7618 -6.9019 -2.3012 19 14 1.8008 -5.6505 -3.8059 20 1 2.1085 -5.8919 -5.2385 21 1 0.8428 -6.6785 -3.3254 22 1 1.1995 -4.3018 -3.6493 23 6 4.2228 -2.1737 -0.8024 24 1 -0.3633 -0.5138 0.8899 25 1 -0.3633 1.0277 -0.0005 26 1 -0.3633 -0.5138 -0.8900 27 1 1.6981 -2.0059 0.0677 28 1 3.8145 0.6218 1.0577 29 1 6.2686 0.6213 0.8887 30 1 7.0940 -2.9970 -2.0602 31 1 3.2293 -7.6992 -2.4484 32 1 3.6490 -2.9551 -1.2784 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001192972311.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:34:00 Heat of formation + Delta-G solvation = -108.463981 kcal Electronic energy + Delta-G solvation = -22388.047326 eV Core-core repulsion = 18693.819082 eV Total energy + Delta-G solvation = -3694.228244 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 318.027 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -40.46369 -38.73850 -36.26714 -35.51067 -35.11551 -34.20459 -33.88490 -33.30297 -30.75222 -29.25441 -27.95472 -26.42299 -22.78434 -22.65267 -20.45380 -19.13755 -18.22690 -17.80160 -17.01790 -16.52167 -16.24535 -15.71507 -15.51834 -14.98791 -14.49580 -14.10226 -14.03700 -13.75937 -13.47408 -13.26180 -12.83861 -12.46100 -12.39273 -12.21588 -11.99121 -11.56901 -11.36888 -11.16872 -10.92356 -10.79931 -10.74032 -10.53723 -10.44751 -10.41271 -10.00703 -9.73214 -9.41947 -9.01203 -8.22584 -7.68552 -6.89609 -5.54886 1.27191 1.58421 1.99281 2.40223 2.52355 2.93185 3.01365 3.04826 3.06793 3.85839 3.89552 4.37951 4.44757 4.62640 5.00400 5.09161 5.18491 5.39878 5.43018 5.48800 5.57786 5.67361 5.76548 6.11032 6.20321 6.32258 6.44584 6.54726 6.67063 7.04027 7.13223 7.39712 7.59519 7.73199 8.05182 8.66814 10.04503 Molecular weight = 318.03amu Principal moments of inertia in cm(-1) A = 0.010034 B = 0.007160 C = 0.004421 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2789.715181 B = 3909.627947 C = 6331.620195 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.511 3.489 3 O -0.530 6.530 4 N -0.670 5.670 5 C 0.178 3.822 6 C -0.143 4.143 7 C -0.070 4.070 8 C -0.089 4.089 9 Cl -0.075 7.075 10 C 0.228 3.772 11 N -1.065 6.065 12 S 2.700 3.300 13 O -0.986 6.986 14 O -0.993 6.993 15 C -1.024 5.024 16 H 0.110 0.890 17 C 0.135 3.865 18 N -0.838 5.838 19 Si 0.922 3.078 20 H -0.265 1.265 21 H -0.273 1.273 22 H -0.261 1.261 23 C -0.185 4.185 24 H 0.091 0.909 25 H 0.094 0.906 26 H 0.092 0.908 27 H 0.417 0.583 28 H 0.144 0.856 29 H 0.135 0.865 30 H 0.416 0.584 31 H 0.294 0.706 32 H 0.173 0.827 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.820 11.366 3.812 12.920 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.300 3.700 3 O -0.406 6.406 4 N -0.315 5.315 5 C 0.083 3.917 6 C -0.165 4.165 7 C -0.090 4.090 8 C -0.121 4.121 9 Cl -0.046 7.046 10 C 0.127 3.873 11 N -0.805 5.805 12 S 2.800 3.200 13 O -0.976 6.976 14 O -0.984 6.984 15 C -1.157 5.157 16 H 0.128 0.872 17 C -0.085 4.085 18 N -0.466 5.466 19 Si 0.745 3.255 20 H -0.190 1.190 21 H -0.198 1.198 22 H -0.185 1.185 23 C -0.209 4.209 24 H 0.110 0.890 25 H 0.113 0.887 26 H 0.111 0.889 27 H 0.254 0.746 28 H 0.162 0.838 29 H 0.153 0.847 30 H 0.250 0.750 31 H 0.105 0.895 32 H 0.190 0.810 Dipole moment (debyes) X Y Z Total from point charges -4.030 11.049 4.291 12.519 hybrid contribution -0.832 -0.171 -1.153 1.432 sum -4.862 10.877 3.139 12.321 Atomic orbital electron populations 1.21928 0.90781 1.05777 1.04811 1.20985 0.90872 0.83071 0.75075 1.90714 1.70521 1.31282 1.48078 1.43606 1.05211 1.10313 1.72394 1.17422 0.82577 0.95890 0.95765 1.21037 0.92625 1.00380 1.02417 1.20681 0.93929 0.96830 0.97529 1.20724 0.84036 1.00576 1.06742 1.98323 1.10621 1.98409 1.97293 1.16788 0.90253 0.88481 0.91813 1.54363 1.35908 1.28326 1.61943 1.01161 0.75280 0.68899 0.74642 1.93412 1.84102 1.80537 1.39590 1.93405 1.67272 1.64621 1.73056 1.30548 1.29624 1.02932 1.52635 0.87171 1.24751 0.98540 0.93114 0.92069 1.69884 1.38727 1.00331 1.37704 0.86139 0.80008 0.79146 0.80213 1.19020 1.19813 1.18472 1.21549 0.92690 1.03312 1.03334 0.88993 0.88682 0.88891 0.74601 0.83827 0.84671 0.74954 0.89541 0.81033 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.28 10.32 36.01 0.37 -0.91 16 2 C 0.51 6.27 7.78 -10.98 -0.09 6.18 16 3 O -0.53 -8.32 14.54 5.55 0.08 -8.24 16 4 N -0.67 -8.71 5.33 -9.87 -0.05 -8.76 16 5 C 0.18 2.89 6.29 -83.71 -0.53 2.37 16 6 C -0.14 -2.20 8.69 -39.35 -0.34 -2.55 16 7 C -0.07 -1.04 9.81 -39.60 -0.39 -1.43 16 8 C -0.09 -1.50 6.34 -39.29 -0.25 -1.75 16 9 Cl -0.08 -1.14 27.88 -51.86 -1.45 -2.59 16 10 C 0.23 4.36 6.21 -83.76 -0.52 3.84 16 11 N -1.06 -21.76 5.55 32.42 0.18 -21.58 16 12 S 2.70 68.84 4.62 -107.50 -0.50 68.34 16 13 O -0.99 -27.40 17.38 -57.17 -0.99 -28.39 16 14 O -0.99 -28.17 18.02 -57.17 -1.03 -29.20 16 15 C -1.02 -25.79 7.56 30.60 0.23 -25.56 16 16 H 0.11 2.51 6.98 -52.48 -0.37 2.14 16 17 C 0.13 3.45 5.46 -17.82 -0.10 3.35 16 18 N -0.84 -22.97 13.19 55.43 0.73 -22.24 16 19 Si 0.92 18.70 29.54 -169.99 -5.02 13.68 16 20 H -0.27 -5.34 7.11 56.52 0.40 -4.94 16 21 H -0.27 -5.32 7.11 56.52 0.40 -4.91 16 22 H -0.26 -4.95 7.11 56.52 0.40 -4.55 16 23 C -0.19 -3.46 8.79 -39.20 -0.34 -3.81 16 24 H 0.09 0.49 8.14 -51.93 -0.42 0.07 16 25 H 0.09 0.67 8.12 -51.93 -0.42 0.24 16 26 H 0.09 0.58 8.14 -51.93 -0.42 0.15 16 27 H 0.42 4.43 8.82 -40.82 -0.36 4.07 16 28 H 0.14 2.12 6.24 -52.48 -0.33 1.79 16 29 H 0.14 1.63 8.06 -52.49 -0.42 1.20 16 30 H 0.42 7.54 8.09 -34.47 -0.28 7.27 16 31 H 0.29 7.21 8.31 -40.82 -0.34 6.87 16 32 H 0.17 3.40 4.54 -52.49 -0.24 3.16 16 LS Contribution 310.08 15.07 4.67 4.67 Total: -1.00 -34.28 310.08 -7.72 -42.00 By element: Atomic # 1 Polarization: 14.97 SS G_CDS: -2.40 Total: 12.57 kcal Atomic # 6 Polarization: -18.31 SS G_CDS: -1.95 Total: -20.26 kcal Atomic # 7 Polarization: -53.43 SS G_CDS: 0.86 Total: -52.57 kcal Atomic # 8 Polarization: -63.90 SS G_CDS: -1.94 Total: -65.84 kcal Atomic # 14 Polarization: 18.70 SS G_CDS: -5.02 Total: 13.68 kcal Atomic # 16 Polarization: 68.84 SS G_CDS: -0.50 Total: 68.34 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.45 Total: -2.59 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -34.28 -7.72 -42.00 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001192972311.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.465 kcal (2) G-P(sol) polarization free energy of solvation -34.278 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.999 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds