Wall clock time and date at job start Tue Mar 31 2020 11:43:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38159 * 119.97921 * 2 1 4 4 C 1.38709 * 119.95683 * 180.02562 * 3 2 1 5 5 O 1.35909 * 120.04905 * 179.97438 * 4 3 2 6 6 C 1.42895 * 117.00300 * 176.53141 * 5 4 3 7 7 H 1.09000 * 109.47186 * 26.94588 * 6 5 4 8 8 C 1.50701 * 109.47231 * 146.94346 * 6 5 4 9 9 H 1.07998 * 120.00077 * 0.02562 * 8 6 5 10 10 C 1.37877 * 120.00019 * 180.02562 * 8 6 5 11 11 N 1.31516 * 120.00191 * 0.02562 * 10 8 6 12 12 Si 1.86803 * 120.00098 * 180.02562 * 10 8 6 13 13 H 1.48499 * 109.46873 * 359.97438 * 12 10 8 14 14 H 1.48499 * 109.47089 * 119.99806 * 12 10 8 15 15 H 1.48495 * 109.46991 * 240.00174 * 12 10 8 16 16 C 1.53001 * 109.47245 * 266.94524 * 6 5 4 17 17 Cl 1.80301 * 109.46969 * 65.00218 * 16 6 5 18 18 C 1.38745 * 119.90624 * 359.97438 * 4 3 2 19 19 C 1.38124 * 119.95438 * 0.02562 * 18 4 3 20 20 C 1.38327 * 119.97479 * 180.02562 * 2 1 3 21 21 Br 1.89099 * 119.95475 * 0.27074 * 20 2 1 22 22 H 1.08996 * 109.47221 * 270.00352 * 1 2 3 23 23 H 1.09005 * 109.47149 * 30.00291 * 1 2 3 24 24 H 1.08995 * 109.47262 * 149.99900 * 1 2 3 25 25 H 1.08000 * 120.02415 * 359.97438 * 3 2 1 26 26 H 0.96996 * 120.00018 * 179.97438 * 11 10 8 27 27 H 1.09006 * 109.46915 * 184.99459 * 16 6 5 28 28 H 1.08995 * 109.47549 * 304.99878 * 16 6 5 29 29 H 1.07997 * 120.02648 * 180.02562 * 18 4 3 30 30 H 1.08001 * 119.97927 * 179.97438 * 19 18 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1973 1.1967 0.0000 4 6 3.5844 1.1962 -0.0005 5 8 4.2654 2.3724 -0.0011 6 6 5.6904 2.2970 0.0754 7 1 6.0272 1.3493 -0.3446 8 6 6.2962 3.4355 -0.7043 9 1 5.6570 4.1458 -1.2075 10 6 7.6665 3.5703 -0.7752 11 7 8.4450 2.7051 -0.1628 12 14 8.4174 4.9819 -1.7411 13 1 7.3346 5.8084 -2.3323 14 1 9.2409 5.8202 -0.8331 15 1 9.2737 4.4390 -2.8261 16 6 6.1283 2.3909 1.5384 17 17 5.5255 0.9504 2.4397 18 6 4.2757 -0.0068 -0.0005 19 6 3.5817 -1.2010 -0.0005 20 6 2.1981 -1.1983 -0.0005 21 35 1.2506 -2.8347 -0.0090 22 1 -0.3633 0.0001 1.0276 23 1 -0.3634 0.8900 -0.5139 24 1 -0.3633 -0.8899 -0.5138 25 1 1.6574 2.1321 -0.0004 26 1 9.4090 2.7998 -0.2130 27 1 7.2166 2.4228 1.5906 28 1 5.7165 3.2965 1.9836 29 1 5.3557 -0.0095 -0.0005 30 1 4.1194 -2.1377 -0.0010 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001225752535.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:43:23 Heat of formation + Delta-G solvation = -32.488133 kcal Electronic energy + Delta-G solvation = -16630.370884 eV Core-core repulsion = 13690.673057 eV Total energy + Delta-G solvation = -2939.697828 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 317.976 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -39.67040 -37.34049 -34.92240 -33.58006 -32.33608 -31.48209 -29.78047 -28.11037 -26.55955 -25.40114 -22.39915 -22.07248 -19.88541 -17.50610 -16.84141 -15.56417 -15.41308 -14.75139 -14.55294 -14.06958 -13.59147 -13.52294 -13.06151 -12.68868 -12.32328 -12.14941 -11.91458 -11.69032 -11.38759 -11.26930 -11.06215 -11.02146 -10.69553 -10.34374 -10.23386 -9.90535 -9.66080 -9.44988 -9.15583 -8.74695 -8.45696 -7.45382 -6.50564 -4.58470 1.63437 1.68618 1.96670 3.07172 3.17082 3.22137 3.33052 3.94241 4.04592 4.30260 4.86064 5.05891 5.12354 5.43656 5.63972 5.70995 5.73102 5.89083 6.04429 6.12848 6.18992 6.27940 6.46345 6.64764 6.70472 6.85888 7.01450 7.13289 7.47774 7.67662 8.20879 8.58740 9.09797 10.56665 Molecular weight = 317.98amu Principal moments of inertia in cm(-1) A = 0.026612 B = 0.003855 C = 0.003718 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1051.893034 B = 7262.074365 C = 7528.193910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.026 4.026 3 C -0.167 4.167 4 C 0.179 3.821 5 O -0.306 6.306 6 C 0.203 3.797 7 H 0.053 0.947 8 C -0.523 4.523 9 H 0.078 0.922 10 C 0.064 3.936 11 N -0.888 5.888 12 Si 0.917 3.083 13 H -0.268 1.268 14 H -0.279 1.279 15 H -0.279 1.279 16 C -0.037 4.037 17 Cl -0.239 7.239 18 C -0.193 4.193 19 C -0.050 4.050 20 C -0.145 4.145 21 Br -0.074 7.074 22 H 0.074 0.926 23 H 0.069 0.931 24 H 0.074 0.926 25 H 0.131 0.869 26 H 0.272 0.728 27 H 0.135 0.865 28 H 0.075 0.925 29 H 0.145 0.855 30 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.234 -7.616 0.870 13.600 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.028 4.028 3 C -0.187 4.187 4 C 0.131 3.869 5 O -0.219 6.219 6 C 0.149 3.851 7 H 0.071 0.929 8 C -0.560 4.560 9 H 0.096 0.904 10 C -0.139 4.139 11 N -0.525 5.525 12 Si 0.743 3.257 13 H -0.192 1.192 14 H -0.205 1.205 15 H -0.204 1.204 16 C -0.099 4.099 17 Cl -0.213 7.213 18 C -0.212 4.212 19 C -0.070 4.070 20 C -0.224 4.224 21 Br 0.011 6.989 22 H 0.092 0.908 23 H 0.088 0.912 24 H 0.092 0.908 25 H 0.149 0.851 26 H 0.082 0.918 27 H 0.152 0.848 28 H 0.094 0.906 29 H 0.163 0.837 30 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -11.481 -8.153 0.957 14.114 hybrid contribution 1.016 0.834 -0.251 1.338 sum -10.466 -7.319 0.706 12.791 Atomic orbital electron populations 1.20934 0.90699 1.03257 1.02756 1.19365 0.95837 0.90864 0.96719 1.20167 0.91331 0.97659 1.09520 1.19204 0.91653 0.86176 0.89889 1.86159 1.23748 1.26527 1.85426 1.20609 0.72861 1.00375 0.91281 0.92943 1.21049 0.91530 1.11746 1.31711 0.90424 1.24983 0.96528 0.96980 0.95413 1.69798 1.05221 1.35364 1.42142 0.86116 0.79128 0.80995 0.79472 1.19235 1.20466 1.20448 1.25770 1.05113 0.85579 0.93472 1.98649 1.91001 1.51281 1.80413 1.21506 1.01666 0.91439 1.06608 1.20756 0.91615 0.98271 0.96389 1.21287 0.94309 0.89999 1.16842 1.96519 1.75919 1.28355 1.98142 0.90782 0.91213 0.90759 0.85092 0.91766 0.84773 0.90633 0.83727 0.85650 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.43 9.55 36.00 0.34 -1.09 16 2 C -0.03 -0.40 5.88 -104.62 -0.62 -1.01 16 3 C -0.17 -2.87 9.64 -39.44 -0.38 -3.25 16 4 C 0.18 3.54 5.96 -39.22 -0.23 3.31 16 5 O -0.31 -6.83 9.73 -19.45 -0.19 -7.02 16 6 C 0.20 4.77 2.19 -27.88 -0.06 4.71 16 7 H 0.05 1.30 5.39 -51.93 -0.28 1.02 16 8 C -0.52 -13.21 8.89 -34.44 -0.31 -13.52 16 9 H 0.08 1.98 7.81 -52.49 -0.41 1.57 16 10 C 0.06 1.59 5.29 -17.82 -0.09 1.50 16 11 N -0.89 -22.48 11.30 55.43 0.63 -21.86 16 12 Si 0.92 19.41 29.54 -169.99 -5.02 14.39 16 13 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 14 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 15 H -0.28 -5.89 7.11 56.52 0.40 -5.49 16 16 C -0.04 -0.81 6.17 37.16 0.23 -0.58 16 17 Cl -0.24 -4.82 25.62 -51.86 -1.33 -6.15 16 18 C -0.19 -3.65 7.05 -39.44 -0.28 -3.93 16 19 C -0.05 -0.84 9.78 -39.58 -0.39 -1.23 16 20 C -0.15 -2.29 6.22 -39.50 -0.25 -2.54 16 21 Br -0.07 -0.98 31.77 -68.01 -2.16 -3.14 16 22 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 23 H 0.07 0.74 8.09 -51.93 -0.42 0.32 16 24 H 0.07 0.84 6.63 -51.93 -0.34 0.50 16 25 H 0.13 2.05 8.06 -52.49 -0.42 1.62 16 26 H 0.27 6.53 8.31 -40.82 -0.34 6.19 16 27 H 0.13 3.18 5.96 -51.93 -0.31 2.87 16 28 H 0.08 1.63 8.14 -51.93 -0.42 1.21 16 29 H 0.15 2.92 5.11 -52.49 -0.27 2.65 16 30 H 0.13 1.87 8.06 -52.49 -0.42 1.45 16 LS Contribution 285.59 15.07 4.30 4.30 Total: -1.00 -24.86 285.59 -8.65 -33.52 By element: Atomic # 1 Polarization: 6.45 SS G_CDS: -2.86 Total: 3.60 kcal Atomic # 6 Polarization: -15.61 SS G_CDS: -2.03 Total: -17.64 kcal Atomic # 7 Polarization: -22.48 SS G_CDS: 0.63 Total: -21.86 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -0.19 Total: -7.02 kcal Atomic # 14 Polarization: 19.41 SS G_CDS: -5.02 Total: 14.39 kcal Atomic # 17 Polarization: -4.82 SS G_CDS: -1.33 Total: -6.15 kcal Atomic # 35 Polarization: -0.98 SS G_CDS: -2.16 Total: -3.14 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -24.86 -8.65 -33.52 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001225752535.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.028 kcal (2) G-P(sol) polarization free energy of solvation -24.861 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.516 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.488 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds