Wall clock time and date at job start Tue Mar 31 2020 12:07:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39116 * 120.57022 * 36.97925 * 3 2 1 5 5 C 1.39326 * 119.80747 * 180.25543 * 4 3 2 6 6 C 1.48077 * 119.49547 * 179.75223 * 5 4 3 7 7 C 1.39945 * 120.90856 * 359.70425 * 6 5 4 8 8 C 1.38090 * 119.01444 * 179.70458 * 7 6 5 9 9 Cl 1.73593 * 119.55791 * 180.29432 * 8 7 6 10 10 N 1.32043 * 120.88297 * 0.57718 * 8 7 6 11 11 C 1.32048 * 122.01832 * 359.71764 * 10 8 7 12 12 Cl 1.73604 * 119.55461 * 179.97438 * 11 10 8 13 13 C 1.38082 * 120.88708 * 359.97438 * 11 10 8 14 14 C 1.39933 * 121.01114 * 359.73480 * 5 4 3 15 15 C 1.36046 * 121.19333 * 359.97438 * 14 5 4 16 16 C 1.41017 * 120.10649 * 359.97438 * 15 14 5 17 17 C 1.40485 * 120.49567 * 179.97438 * 16 15 14 18 18 H 1.07996 * 120.00491 * 154.65041 * 17 16 15 19 19 C 1.40344 * 119.99819 * 334.65163 * 17 16 15 20 20 N 1.30609 * 120.00134 * 334.61863 * 19 17 16 21 21 Si 1.86795 * 119.99969 * 154.62288 * 19 17 16 22 22 H 1.48506 * 109.47180 * 179.97438 * 21 19 17 23 23 H 1.48494 * 109.47155 * 299.99776 * 21 19 17 24 24 H 1.48500 * 109.47152 * 59.99875 * 21 19 17 25 25 H 1.07997 * 120.09358 * 359.97438 * 4 3 2 26 26 H 1.07996 * 120.49148 * 359.97438 * 7 6 5 27 27 H 1.08002 * 120.49589 * 180.02562 * 13 11 10 28 28 H 1.07996 * 119.40692 * 179.97438 * 14 5 4 29 29 H 1.08000 * 119.94767 * 179.97438 * 15 14 5 30 30 H 0.97004 * 119.99970 * 354.19036 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2760 -0.9559 -0.7205 5 6 4.6692 -0.9437 -0.7050 6 6 5.4158 -1.9685 -1.4700 7 6 4.7413 -2.9518 -2.2026 8 6 5.4765 -3.8847 -2.9068 9 17 4.6543 -5.1060 -3.8265 10 7 6.7966 -3.8636 -2.8855 11 6 7.4714 -2.9570 -2.2025 12 17 9.2071 -2.9893 -2.2188 13 6 6.8150 -1.9836 -1.4756 14 6 5.3737 0.0223 0.0220 15 6 4.7229 0.9801 0.7361 16 6 3.3132 1.0140 0.7537 17 6 2.6328 1.9991 1.4887 18 1 1.6336 2.2925 1.2027 19 6 3.2517 2.6019 2.5947 20 7 4.1878 1.9656 3.2465 21 14 2.7366 4.3143 3.1347 22 1 3.5355 4.7213 4.3186 23 1 2.9698 5.2741 2.0259 24 1 1.2946 4.3086 3.4894 25 1 2.7473 -1.7085 -1.2865 26 1 3.6618 -2.9779 -2.2204 27 1 7.3733 -1.2449 -0.9196 28 1 6.4535 0.0073 0.0162 29 1 5.2868 1.7158 1.2904 30 1 4.3969 1.0459 3.0201 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001243367521.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:07:42 Heat of formation + Delta-G solvation = 47.991227 kcal Electronic energy + Delta-G solvation = -19815.636862 eV Core-core repulsion = 16433.458238 eV Total energy + Delta-G solvation = -3382.178624 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 318.002 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.18605 -38.26850 -36.83237 -36.45082 -35.50232 -35.03849 -32.71190 -31.11457 -30.16078 -29.50783 -26.23370 -24.00114 -23.30213 -22.21438 -21.00837 -18.83264 -17.99809 -16.78139 -16.43144 -15.95169 -14.99426 -14.95313 -14.74988 -14.45133 -14.10370 -13.73138 -13.20244 -12.83257 -12.74529 -12.41976 -12.27733 -12.08960 -11.86066 -11.73353 -11.56382 -11.53467 -11.22468 -11.14104 -11.02426 -10.74243 -10.28115 -10.22743 -9.92894 -9.67990 -9.51172 -8.83567 -8.32763 -8.05449 -7.80024 -5.17816 0.90835 0.91251 1.53331 1.85455 2.06721 2.34943 2.84156 2.90674 3.05078 3.51883 3.54113 3.58907 3.96078 4.10152 4.60932 4.91606 4.95778 4.98338 5.06562 5.18526 5.29568 5.58766 5.78375 5.85595 6.04849 6.28115 6.42213 6.44200 6.66296 6.92950 7.03287 7.09443 7.24195 7.38522 7.52051 7.58664 7.92536 8.02981 8.48259 9.26564 Molecular weight = 318.00amu Principal moments of inertia in cm(-1) A = 0.015977 B = 0.003519 C = 0.002916 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1752.152178 B = 7955.168304 C = 9599.969443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.493 5.493 2 C 0.294 3.706 3 C -0.181 4.181 4 C 0.025 3.975 5 C -0.232 4.232 6 C 0.092 3.908 7 C -0.184 4.184 8 C 0.205 3.795 9 Cl -0.036 7.036 10 N -0.512 5.512 11 C 0.204 3.796 12 Cl -0.036 7.036 13 C -0.181 4.181 14 C -0.028 4.028 15 C -0.214 4.214 16 C 0.124 3.876 17 C -0.437 4.437 18 H 0.092 0.908 19 C 0.032 3.968 20 N -0.739 5.739 21 Si 1.067 2.933 22 H -0.265 1.265 23 H -0.266 1.266 24 H -0.268 1.268 25 H 0.109 0.891 26 H 0.147 0.853 27 H 0.149 0.851 28 H 0.104 0.896 29 H 0.118 0.882 30 H 0.310 0.690 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.233 -3.382 -4.511 8.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.171 5.171 2 C -0.017 4.017 3 C -0.187 4.187 4 C 0.004 3.996 5 C -0.234 4.234 6 C 0.085 3.915 7 C -0.206 4.206 8 C 0.042 3.958 9 Cl -0.008 7.008 10 N -0.227 5.227 11 C 0.041 3.959 12 Cl -0.008 7.008 13 C -0.202 4.202 14 C -0.047 4.047 15 C -0.233 4.233 16 C 0.118 3.882 17 C -0.462 4.462 18 H 0.110 0.890 19 C -0.196 4.196 20 N -0.358 5.358 21 Si 0.887 3.113 22 H -0.189 1.189 23 H -0.190 1.190 24 H -0.193 1.193 25 H 0.127 0.873 26 H 0.165 0.835 27 H 0.167 0.833 28 H 0.122 0.878 29 H 0.136 0.864 30 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 5.417 -2.989 -3.943 7.337 hybrid contribution -0.102 -0.960 -0.853 1.288 sum 5.315 -3.950 -4.796 8.176 Atomic orbital electron populations 1.81074 1.12512 1.10918 1.12639 1.25645 0.92575 0.91859 0.91596 1.16652 0.83446 1.03340 1.15248 1.20686 0.92622 0.93916 0.92378 1.17399 0.91743 1.02456 1.11822 1.19071 0.91442 0.91142 0.89885 1.21872 1.01813 0.96149 1.00735 1.21094 0.88307 0.91565 0.94848 1.98393 1.75565 1.54276 1.72564 1.66005 1.08111 1.25997 1.22550 1.21108 0.86655 0.92625 0.95488 1.98392 1.07209 1.97885 1.97297 1.21860 0.94400 1.00755 1.03216 1.20419 0.98112 0.92768 0.93442 1.20790 0.93472 1.02199 1.06808 1.18546 0.91553 0.88592 0.89518 1.21156 1.03343 1.13091 1.08626 0.88961 1.27571 0.92149 1.06678 0.93238 1.70409 1.19040 1.13955 1.32396 0.83574 0.77758 0.71847 0.78091 1.18927 1.19031 1.19291 0.87335 0.83519 0.83347 0.87778 0.86370 0.87497 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.49 -10.86 18.54 41.84 0.78 -10.08 16 2 C 0.29 6.19 14.30 -22.47 -0.32 5.87 16 3 C -0.18 -3.64 5.93 -104.26 -0.62 -4.26 16 4 C 0.03 0.45 9.14 -38.85 -0.36 0.10 16 5 C -0.23 -3.97 5.88 -104.82 -0.62 -4.58 16 6 C 0.09 1.44 5.91 -104.59 -0.62 0.82 16 7 C -0.18 -2.72 9.25 -39.00 -0.36 -3.08 16 8 C 0.20 3.08 7.27 -17.52 -0.13 2.95 16 9 Cl -0.04 -0.48 29.10 -51.86 -1.51 -1.99 16 10 N -0.51 -8.17 10.30 -7.59 -0.08 -8.25 16 11 C 0.20 3.04 7.27 -17.52 -0.13 2.91 16 12 Cl -0.04 -0.47 29.10 -51.86 -1.51 -1.98 16 13 C -0.18 -2.63 9.25 -39.00 -0.36 -2.99 16 14 C -0.03 -0.49 9.32 -39.73 -0.37 -0.86 16 15 C -0.21 -4.12 7.88 -39.32 -0.31 -4.43 16 16 C 0.12 2.59 5.47 -104.61 -0.57 2.02 16 17 C -0.44 -9.35 8.49 -37.94 -0.32 -9.67 16 18 H 0.09 2.01 7.45 -52.49 -0.39 1.62 16 19 C 0.03 0.65 4.95 -17.28 -0.09 0.56 16 20 N -0.74 -15.44 12.30 55.57 0.68 -14.75 16 21 Si 1.07 17.30 30.01 -169.99 -5.10 12.20 16 22 H -0.27 -4.28 7.11 56.52 0.40 -3.87 16 23 H -0.27 -4.15 7.11 56.52 0.40 -3.75 16 24 H -0.27 -4.27 7.11 56.52 0.40 -3.87 16 25 H 0.11 1.69 6.22 -52.49 -0.33 1.36 16 26 H 0.15 1.95 6.28 -52.49 -0.33 1.62 16 27 H 0.15 1.91 6.26 -52.49 -0.33 1.58 16 28 H 0.10 1.54 6.18 -52.49 -0.32 1.21 16 29 H 0.12 2.30 6.49 -52.49 -0.34 1.96 16 30 H 0.31 6.55 6.68 -40.82 -0.27 6.28 16 LS Contribution 306.54 15.07 4.62 4.62 Total: -1.00 -22.34 306.54 -8.39 -30.74 By element: Atomic # 1 Polarization: 5.25 SS G_CDS: -1.11 Total: 4.14 kcal Atomic # 6 Polarization: -9.48 SS G_CDS: -5.17 Total: -14.64 kcal Atomic # 7 Polarization: -34.46 SS G_CDS: 1.38 Total: -33.08 kcal Atomic # 14 Polarization: 17.30 SS G_CDS: -5.10 Total: 12.20 kcal Atomic # 17 Polarization: -0.95 SS G_CDS: -3.02 Total: -3.97 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -22.34 -8.39 -30.74 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001243367521.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.728 kcal (2) G-P(sol) polarization free energy of solvation -22.344 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.392 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.736 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.991 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds