Wall clock time and date at job start Tue Mar 31 2020 12:07:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39114 * 120.56200 * 272.85119 * 3 2 1 5 5 C 1.39354 * 119.80342 * 180.31919 * 4 3 2 6 6 C 1.48041 * 119.49817 * 179.70943 * 5 4 3 7 7 C 1.40014 * 120.92531 * 309.70008 * 6 5 4 8 8 C 1.37876 * 119.04409 * 179.79789 * 7 6 5 9 9 N 1.31974 * 120.95237 * 0.48698 * 8 7 6 10 10 C 1.31984 * 122.05638 * 359.74013 * 9 8 7 11 11 Cl 1.73592 * 119.58079 * 179.97438 * 10 9 8 12 12 C 1.38296 * 120.84273 * 0.02562 * 10 9 8 13 13 Cl 1.73591 * 120.52436 * 179.97438 * 12 10 9 14 14 C 1.39955 * 121.00302 * 359.69367 * 5 4 3 15 15 C 1.36038 * 121.19589 * 359.97438 * 14 5 4 16 16 C 1.41027 * 120.10481 * 0.02792 * 15 14 5 17 17 C 1.40471 * 120.49056 * 179.97438 * 16 15 14 18 18 H 1.08001 * 120.00248 * 154.64459 * 17 16 15 19 19 C 1.40349 * 119.99792 * 334.64602 * 17 16 15 20 20 N 1.30604 * 119.99942 * 334.61863 * 19 17 16 21 21 Si 1.86798 * 119.99487 * 154.62217 * 19 17 16 22 22 H 1.48512 * 109.46751 * 179.97438 * 21 19 17 23 23 H 1.48497 * 109.47272 * 299.99779 * 21 19 17 24 24 H 1.48501 * 109.47595 * 60.00117 * 21 19 17 25 25 H 1.07997 * 120.10067 * 359.97438 * 4 3 2 26 26 H 1.08002 * 120.47918 * 0.02562 * 7 6 5 27 27 H 1.08001 * 119.52582 * 180.22789 * 8 7 6 28 28 H 1.08001 * 119.40331 * 179.97438 * 14 5 4 29 29 H 1.07997 * 119.94956 * 180.02562 * 15 14 5 30 30 H 0.97004 * 120.00451 * 354.19152 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2754 -0.0586 1.1964 5 6 4.6688 -0.0504 1.1783 6 6 5.4148 -0.1072 2.4558 7 6 5.1097 0.7664 3.5066 8 6 5.8264 0.6768 4.6811 9 7 6.7943 -0.2095 4.8196 10 6 7.1188 -1.0491 3.8543 11 17 8.4039 -2.1887 4.1058 12 6 6.4487 -1.0319 2.6447 13 17 6.8827 -2.1395 1.3805 14 6 5.3737 0.0105 -0.0292 15 6 4.7234 0.0630 -1.2229 16 6 3.3137 0.0573 -1.2612 17 6 2.6338 0.1118 -2.4893 18 1 1.6350 -0.2906 -2.5719 19 6 3.2526 0.6890 -3.6089 20 7 4.1878 1.5865 -3.4479 21 14 2.7386 0.1738 -5.3293 22 1 3.5373 0.9256 -6.3305 23 1 2.9733 -1.2825 -5.5007 24 1 1.2964 0.4691 -5.5244 25 1 2.7463 -0.1053 2.1367 26 1 4.3219 1.4975 3.4001 27 1 5.5951 1.3443 5.4980 28 1 6.4536 0.0159 -0.0131 29 1 5.2875 0.1090 -2.1427 30 1 4.3963 1.9158 -2.5597 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001243416470.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:07:46 Heat of formation + Delta-G solvation = 50.456691 kcal Electronic energy + Delta-G solvation = -20158.884435 eV Core-core repulsion = 16776.812721 eV Total energy + Delta-G solvation = -3382.071714 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 318.002 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -40.18960 -38.15049 -36.66526 -36.41707 -35.40221 -34.88108 -32.58361 -30.88223 -30.24471 -29.43234 -26.13464 -23.65082 -23.29255 -22.43706 -20.97608 -18.66012 -17.93091 -16.85541 -16.26860 -15.93191 -15.21687 -15.00794 -14.56097 -14.27507 -14.18650 -13.63977 -13.07312 -12.74149 -12.58700 -12.41954 -12.19588 -11.93083 -11.80351 -11.72736 -11.55441 -11.47626 -11.20921 -11.13030 -10.70515 -10.66995 -10.22259 -10.12091 -9.62863 -9.59986 -9.41611 -8.80584 -8.19764 -7.98869 -7.70458 -5.06836 0.84170 0.99126 1.74195 1.95047 2.20980 2.35865 2.90824 2.97164 3.11560 3.56397 3.62098 3.67375 3.88873 4.19788 4.47161 4.74940 4.85648 4.99650 5.15086 5.19652 5.36477 5.61526 5.79093 5.96535 6.08097 6.36354 6.45219 6.47707 6.79662 7.03554 7.14652 7.21820 7.34607 7.51644 7.64018 7.65807 8.07046 8.17753 8.57811 9.40247 Molecular weight = 318.00amu Principal moments of inertia in cm(-1) A = 0.018527 B = 0.003893 C = 0.003467 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1510.945732 B = 7191.136955 C = 8073.892846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.500 5.500 2 C 0.296 3.704 3 C -0.188 4.188 4 C 0.024 3.976 5 C -0.235 4.235 6 C 0.079 3.921 7 C -0.170 4.170 8 C 0.118 3.882 9 N -0.488 5.488 10 C 0.185 3.815 11 Cl -0.028 7.028 12 C -0.089 4.089 13 Cl -0.032 7.032 14 C -0.019 4.019 15 C -0.215 4.215 16 C 0.130 3.870 17 C -0.452 4.452 18 H 0.089 0.911 19 C 0.035 3.965 20 N -0.747 5.747 21 Si 1.066 2.934 22 H -0.266 1.266 23 H -0.267 1.267 24 H -0.269 1.269 25 H 0.104 0.896 26 H 0.148 0.852 27 H 0.166 0.834 28 H 0.100 0.900 29 H 0.116 0.884 30 H 0.309 0.691 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.886 -1.679 6.892 9.886 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.178 5.178 2 C -0.014 4.014 3 C -0.193 4.193 4 C 0.002 3.998 5 C -0.237 4.237 6 C 0.071 3.929 7 C -0.190 4.190 8 C -0.037 4.037 9 N -0.201 5.201 10 C 0.020 3.980 11 Cl 0.001 6.999 12 C -0.120 4.120 13 Cl -0.003 7.003 14 C -0.039 4.039 15 C -0.234 4.234 16 C 0.124 3.876 17 C -0.477 4.477 18 H 0.107 0.893 19 C -0.193 4.193 20 N -0.366 5.366 21 Si 0.887 3.113 22 H -0.191 1.191 23 H -0.192 1.192 24 H -0.194 1.194 25 H 0.122 0.878 26 H 0.166 0.834 27 H 0.183 0.817 28 H 0.118 0.882 29 H 0.134 0.866 30 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 6.139 -1.629 6.006 8.741 hybrid contribution -0.090 -0.358 0.955 1.024 sum 6.048 -1.988 6.961 9.433 Atomic orbital electron populations 1.81058 1.12580 1.14713 1.09482 1.25670 0.92595 0.91394 0.91704 1.16618 0.83335 1.25680 0.93701 1.20505 0.92074 0.91888 0.95308 1.17350 0.91778 1.24880 0.89699 1.19165 0.90064 0.89350 0.94367 1.22454 1.02625 1.00451 0.93496 1.22576 0.89962 0.94220 0.96949 1.67037 1.17254 1.05355 1.30420 1.21339 0.92808 0.94132 0.89687 1.98397 1.47643 1.56862 1.97011 1.21874 1.01068 0.98053 0.90957 1.98380 1.91787 1.60183 1.49993 1.20351 0.97938 0.94087 0.91497 1.20746 0.93466 1.12209 0.97002 1.18503 0.91433 0.87254 0.90384 1.21030 1.03412 1.29066 0.94237 0.89261 1.27479 0.92155 0.92767 1.06873 1.70399 1.19655 1.15547 1.31040 0.83596 0.77631 0.77948 0.72149 1.19065 1.19156 1.19420 0.87795 0.83409 0.81664 0.88222 0.86564 0.87659 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -11.35 18.54 41.84 0.78 -10.57 16 2 C 0.30 6.48 14.30 -22.47 -0.32 6.15 16 3 C -0.19 -3.92 5.93 -104.26 -0.62 -4.54 16 4 C 0.02 0.43 9.23 -38.84 -0.36 0.07 16 5 C -0.24 -4.17 5.19 -104.82 -0.54 -4.71 16 6 C 0.08 1.24 5.47 -104.55 -0.57 0.67 16 7 C -0.17 -2.22 9.62 -39.05 -0.38 -2.60 16 8 C 0.12 1.44 11.17 -17.62 -0.20 1.24 16 9 N -0.49 -7.06 10.32 -10.43 -0.11 -7.17 16 10 C 0.19 2.78 7.27 -17.46 -0.13 2.65 16 11 Cl -0.03 -0.37 28.12 -51.86 -1.46 -1.83 16 12 C -0.09 -1.39 6.30 -38.90 -0.25 -1.64 16 13 Cl -0.03 -0.50 25.19 -51.86 -1.31 -1.81 16 14 C -0.02 -0.36 8.11 -39.73 -0.32 -0.68 16 15 C -0.22 -4.42 7.88 -39.32 -0.31 -4.73 16 16 C 0.13 2.86 5.46 -104.62 -0.57 2.28 16 17 C -0.45 -10.16 8.49 -37.95 -0.32 -10.48 16 18 H 0.09 2.05 7.45 -52.49 -0.39 1.66 16 19 C 0.04 0.75 4.95 -17.28 -0.09 0.66 16 20 N -0.75 -16.37 12.30 55.57 0.68 -15.69 16 21 Si 1.07 18.29 30.01 -169.99 -5.10 13.19 16 22 H -0.27 -4.53 7.11 56.52 0.40 -4.12 16 23 H -0.27 -4.43 7.11 56.52 0.40 -4.03 16 24 H -0.27 -4.52 7.11 56.52 0.40 -4.12 16 25 H 0.10 1.69 8.04 -52.49 -0.42 1.27 16 26 H 0.15 1.66 8.06 -52.49 -0.42 1.23 16 27 H 0.17 1.39 8.06 -52.49 -0.42 0.97 16 28 H 0.10 1.74 7.16 -52.49 -0.38 1.36 16 29 H 0.12 2.44 6.48 -52.49 -0.34 2.10 16 30 H 0.31 6.84 6.68 -40.82 -0.27 6.57 16 LS Contribution 307.11 15.07 4.63 4.63 Total: -1.00 -23.71 307.11 -8.30 -32.01 By element: Atomic # 1 Polarization: 4.34 SS G_CDS: -1.44 Total: 2.89 kcal Atomic # 6 Polarization: -10.68 SS G_CDS: -4.97 Total: -15.65 kcal Atomic # 7 Polarization: -34.78 SS G_CDS: 1.35 Total: -33.42 kcal Atomic # 14 Polarization: 18.29 SS G_CDS: -5.10 Total: 13.19 kcal Atomic # 17 Polarization: -0.88 SS G_CDS: -2.76 Total: -3.64 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -23.71 -8.30 -32.01 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001243416470.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.465 kcal (2) G-P(sol) polarization free energy of solvation -23.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.755 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.009 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds