Wall clock time and date at job start Tue Mar 31 2020 12:07:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43194 * 179.97438 * 2 1 4 4 C 1.39573 * 120.45335 * 152.51295 * 3 2 1 5 5 C 1.37725 * 120.18533 * 180.27394 * 4 3 2 6 6 C 1.39816 * 121.17360 * 359.48926 * 5 4 3 7 7 C 1.48314 * 119.54018 * 180.23761 * 6 5 4 8 8 C 1.39841 * 120.90524 * 129.98988 * 7 6 5 9 9 C 1.37923 * 119.06235 * 179.73302 * 8 7 6 10 10 N 1.31954 * 120.93177 * 0.55672 * 9 8 7 11 11 C 1.31971 * 122.01084 * 359.72415 * 10 9 8 12 12 Cl 1.73606 * 119.58600 * 179.97438 * 11 10 9 13 13 C 1.38324 * 120.83018 * 359.97438 * 11 10 9 14 14 Cl 1.73598 * 120.51227 * 180.02562 * 13 11 10 15 15 C 1.38596 * 120.92182 * 0.51861 * 6 5 4 16 16 C 1.40628 * 119.73555 * 359.74418 * 15 6 5 17 17 C 1.40830 * 120.55602 * 180.02562 * 16 15 6 18 18 H 1.07995 * 120.00415 * 155.91117 * 17 16 15 19 19 C 1.40243 * 119.99777 * 335.91200 * 17 16 15 20 20 N 1.30661 * 120.00020 * 341.76865 * 19 17 16 21 21 Si 1.86799 * 120.00171 * 161.76942 * 19 17 16 22 22 H 1.48504 * 109.46929 * 59.99547 * 21 19 17 23 23 H 1.48495 * 109.47452 * 179.97438 * 21 19 17 24 24 H 1.48496 * 109.47154 * 299.99953 * 21 19 17 25 25 H 1.08001 * 119.90538 * 0.02562 * 4 3 2 26 26 H 1.08007 * 119.41224 * 179.74450 * 5 4 3 27 27 H 1.07996 * 120.46287 * 359.97438 * 8 7 6 28 28 H 1.07998 * 119.53452 * 180.30051 * 9 8 7 29 29 H 1.08003 * 120.13184 * 179.72447 * 15 6 5 30 30 H 0.97000 * 119.99743 * 185.04811 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2749 1.0683 -0.5553 5 6 4.6522 1.0606 -0.5574 6 6 5.3708 -0.0011 0.0005 7 6 6.8535 0.0305 -0.0167 8 6 7.5906 -0.2087 1.1473 9 6 8.9681 -0.1754 1.0868 10 7 9.5910 0.0883 -0.0462 11 6 8.9350 0.3254 -1.1665 12 17 9.8186 0.6663 -2.6215 13 6 7.5522 0.3057 -1.1960 14 17 6.6976 0.6182 -2.6744 15 6 4.7170 -1.0853 0.5643 16 6 3.3112 -1.1198 0.5825 17 6 2.6292 -2.2126 1.1514 18 1 1.6207 -2.0887 1.5173 19 6 3.2596 -3.4620 1.2428 20 7 4.3068 -3.7209 0.5055 21 14 2.6022 -4.7562 2.4186 22 1 1.2004 -5.0871 2.0570 23 1 3.4388 -5.9796 2.3263 24 1 2.6443 -4.2307 3.8069 25 1 2.7404 1.9010 -0.9882 26 1 5.1866 1.8914 -0.9942 27 1 7.0883 -0.4203 2.0797 28 1 9.5450 -0.3638 1.9801 29 1 5.2848 -1.9006 0.9878 30 1 4.6986 -4.6082 0.5141 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001243416516.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:07:39 Heat of formation + Delta-G solvation = 58.689572 kcal Electronic energy + Delta-G solvation = -20319.790554 eV Core-core repulsion = 16938.075845 eV Total energy + Delta-G solvation = -3381.714709 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 318.002 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -40.22211 -37.87693 -36.65234 -36.39065 -35.28767 -34.37968 -32.89628 -30.85567 -30.10881 -29.29059 -25.94889 -24.26075 -23.48716 -21.35194 -21.22268 -18.02370 -17.51873 -16.98676 -16.55221 -16.08132 -15.41497 -14.77292 -14.44597 -14.14583 -13.98550 -13.45639 -13.01244 -12.79738 -12.43852 -12.23136 -11.93157 -11.86634 -11.80812 -11.65663 -11.48314 -11.41721 -11.28263 -11.07892 -10.73117 -10.61934 -10.33639 -10.03692 -9.70495 -9.62271 -9.37238 -8.78091 -7.92046 -7.64583 -7.26635 -4.84799 0.84095 0.92649 1.73688 2.03598 2.21337 2.54483 2.84292 2.86659 2.97160 3.55696 3.59379 3.83083 3.98194 4.33473 4.46221 4.71755 4.83596 5.09864 5.23834 5.35196 5.36718 5.75258 5.87654 6.08638 6.21664 6.37911 6.56810 6.66968 6.82089 6.98801 7.30612 7.51248 7.54186 7.62145 7.69295 8.02929 8.27975 8.37332 8.73105 9.61870 Molecular weight = 318.00amu Principal moments of inertia in cm(-1) A = 0.014672 B = 0.004609 C = 0.003851 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1907.974450 B = 6073.568053 C = 7268.291998 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.506 5.506 2 C 0.298 3.702 3 C -0.179 4.179 4 C -0.027 4.027 5 C -0.220 4.220 6 C -0.037 4.037 7 C 0.052 3.948 8 C -0.151 4.151 9 C 0.116 3.884 10 N -0.479 5.479 11 C 0.180 3.820 12 Cl -0.025 7.025 13 C -0.073 4.073 14 Cl -0.026 7.026 15 C -0.126 4.126 16 C 0.146 3.854 17 C -0.425 4.425 18 H 0.089 0.911 19 C 0.076 3.924 20 N -0.761 5.761 21 Si 0.916 3.084 22 H -0.260 1.260 23 H -0.272 1.272 24 H -0.256 1.256 25 H 0.102 0.898 26 H 0.101 0.899 27 H 0.153 0.847 28 H 0.169 0.831 29 H 0.132 0.868 30 H 0.293 0.707 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.842 3.076 0.346 11.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.185 5.185 2 C -0.011 4.011 3 C -0.185 4.185 4 C -0.047 4.047 5 C -0.240 4.240 6 C -0.038 4.038 7 C 0.044 3.956 8 C -0.171 4.171 9 C -0.040 4.040 10 N -0.191 5.191 11 C 0.015 3.985 12 Cl 0.004 6.996 13 C -0.103 4.103 14 Cl 0.003 6.997 15 C -0.146 4.146 16 C 0.140 3.860 17 C -0.452 4.452 18 H 0.107 0.893 19 C -0.148 4.148 20 N -0.383 5.383 21 Si 0.739 3.261 22 H -0.184 1.184 23 H -0.197 1.197 24 H -0.181 1.181 25 H 0.121 0.879 26 H 0.119 0.881 27 H 0.171 0.829 28 H 0.186 0.814 29 H 0.149 0.851 30 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 10.218 2.975 0.036 10.642 hybrid contribution -0.572 -0.688 0.106 0.901 sum 9.646 2.287 0.142 9.914 Atomic orbital electron populations 1.81035 1.12734 1.11116 1.13651 1.25777 0.92720 0.91250 0.91397 1.16963 0.83291 1.01908 1.16326 1.20353 0.93380 0.95319 0.95685 1.20063 0.93086 0.99934 1.10931 1.18232 0.87484 0.96557 1.01500 1.19433 0.95162 0.90864 0.90188 1.22443 0.94580 1.00811 0.99299 1.22623 0.92050 0.94688 0.94607 1.67041 1.40460 1.13611 0.97980 1.21329 0.86901 1.00300 0.89933 1.98399 1.76721 1.92845 1.31661 1.21763 0.90744 1.07089 0.90714 1.98390 1.76600 1.93469 1.31216 1.21337 0.93876 0.96880 1.02495 1.18277 0.90937 0.89700 0.87080 1.19778 1.01094 0.93193 1.31158 0.89330 1.26141 0.93521 1.00387 0.94725 1.69667 1.16689 1.23279 1.28668 0.86182 0.80254 0.78578 0.81088 1.18435 1.19693 1.18052 0.87945 0.88050 0.82947 0.81355 0.85084 0.89516 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.51 -11.82 18.54 41.84 0.78 -11.04 16 2 C 0.30 6.72 14.27 -22.47 -0.32 6.40 16 3 C -0.18 -3.87 5.94 -104.14 -0.62 -4.49 16 4 C -0.03 -0.51 9.74 -39.27 -0.38 -0.89 16 5 C -0.22 -4.06 8.18 -39.18 -0.32 -4.38 16 6 C -0.04 -0.69 5.18 -105.03 -0.54 -1.23 16 7 C 0.05 0.86 5.47 -104.57 -0.57 0.29 16 8 C -0.15 -2.09 9.61 -39.10 -0.38 -2.46 16 9 C 0.12 1.45 11.17 -17.61 -0.20 1.25 16 10 N -0.48 -7.03 10.32 -10.42 -0.11 -7.14 16 11 C 0.18 2.76 7.27 -17.46 -0.13 2.63 16 12 Cl -0.02 -0.34 28.12 -51.86 -1.46 -1.80 16 13 C -0.07 -1.18 6.30 -38.96 -0.25 -1.42 16 14 Cl -0.03 -0.41 25.16 -51.86 -1.30 -1.72 16 15 C -0.13 -2.64 8.17 -38.55 -0.31 -2.95 16 16 C 0.15 3.28 5.74 -104.68 -0.60 2.68 16 17 C -0.43 -9.75 8.58 -37.85 -0.32 -10.08 16 18 H 0.09 2.07 7.37 -52.49 -0.39 1.68 16 19 C 0.08 1.62 5.14 -17.30 -0.09 1.53 16 20 N -0.76 -16.44 10.96 55.56 0.61 -15.83 16 21 Si 0.92 16.25 29.60 -169.99 -5.03 11.22 16 22 H -0.26 -4.76 7.11 56.52 0.40 -4.36 16 23 H -0.27 -4.66 7.11 56.52 0.40 -4.25 16 24 H -0.26 -4.50 7.11 56.52 0.40 -4.10 16 25 H 0.10 1.75 8.06 -52.49 -0.42 1.32 16 26 H 0.10 1.72 7.13 -52.48 -0.37 1.34 16 27 H 0.15 1.84 8.06 -52.49 -0.42 1.42 16 28 H 0.17 1.45 8.06 -52.49 -0.42 1.03 16 29 H 0.13 2.77 6.14 -52.48 -0.32 2.45 16 30 H 0.29 5.75 8.30 -40.82 -0.34 5.41 16 LS Contribution 307.90 15.07 4.64 4.64 Total: -1.00 -24.45 307.90 -8.40 -32.84 By element: Atomic # 1 Polarization: 3.43 SS G_CDS: -1.49 Total: 1.95 kcal Atomic # 6 Polarization: -8.10 SS G_CDS: -5.03 Total: -13.13 kcal Atomic # 7 Polarization: -35.28 SS G_CDS: 1.28 Total: -34.01 kcal Atomic # 14 Polarization: 16.25 SS G_CDS: -5.03 Total: 11.22 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -2.76 Total: -3.51 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -24.45 -8.40 -32.84 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001243416516.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.533 kcal (2) G-P(sol) polarization free energy of solvation -24.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.396 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.844 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds