Wall clock time and date at job start Tue Mar 31 2020 11:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 114.00212 * 2 1 4 4 C 1.52999 * 109.47171 * 180.02562 * 3 2 1 5 5 N 1.46493 * 109.46991 * 65.00303 * 4 3 2 6 6 C 1.36803 * 120.00122 * 263.16586 * 5 4 3 7 7 H 1.08001 * 120.00177 * 358.41687 * 6 5 4 8 8 C 1.39092 * 120.00221 * 178.40440 * 6 5 4 9 9 N 1.31338 * 119.99476 * 89.20292 * 8 6 5 10 10 Si 1.86793 * 120.00395 * 269.20460 * 8 6 5 11 11 H 1.48498 * 109.47125 * 0.02562 * 10 8 6 12 12 H 1.48498 * 109.47317 * 119.99815 * 10 8 6 13 13 H 1.48501 * 109.47067 * 239.99778 * 10 8 6 14 14 C 1.34782 * 120.00192 * 83.17369 * 5 4 3 15 15 O 1.21584 * 120.00039 * 182.80859 * 14 5 4 16 16 C 1.47872 * 119.99836 * 2.80823 * 14 5 4 17 17 N 1.32853 * 119.72832 * 353.94685 * 16 14 5 18 18 C 1.31441 * 121.65770 * 179.97438 * 17 16 14 19 19 C 1.38797 * 120.92421 * 0.02562 * 18 17 16 20 20 Cl 1.73601 * 120.32280 * 180.02562 * 19 18 17 21 21 C 1.38700 * 119.36021 * 359.97438 * 19 18 17 22 22 C 1.38689 * 118.47395 * 0.02562 * 21 19 18 23 23 Cl 1.73612 * 120.47870 * 179.97438 * 22 21 19 24 24 H 1.08999 * 109.47317 * 59.99611 * 1 2 3 25 25 H 1.08995 * 109.47232 * 179.97438 * 1 2 3 26 26 H 1.09007 * 109.46761 * 299.99389 * 1 2 3 27 27 H 1.09001 * 109.47027 * 60.00071 * 3 2 1 28 28 H 1.08997 * 109.47218 * 300.00609 * 3 2 1 29 29 H 1.08994 * 109.47132 * 305.00033 * 4 3 2 30 30 H 1.09002 * 109.47120 * 185.00473 * 4 3 2 31 31 H 0.97003 * 119.99473 * 184.91853 * 9 8 6 32 32 H 1.07996 * 119.54324 * 180.27803 * 18 17 16 33 33 H 1.07999 * 120.75905 * 179.97438 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 -0.0006 5 7 3.9756 0.5644 -1.2527 6 6 4.2312 -0.7788 -1.2979 7 1 4.1333 -1.3775 -0.4044 8 6 4.6171 -1.3734 -2.4946 9 7 5.8892 -1.4410 -2.8140 10 14 3.3261 -2.0758 -3.6475 11 1 1.9767 -1.8742 -3.0613 12 1 3.4040 -1.3833 -4.9588 13 1 3.5711 -3.5279 -3.8393 14 6 4.1289 1.3172 -2.3602 15 8 4.4447 0.7946 -3.4116 16 6 3.9131 2.7787 -2.2965 17 7 3.4520 3.3284 -1.1783 18 6 3.2467 4.6229 -1.0797 19 6 3.5055 5.4696 -2.1487 20 17 3.2293 7.1771 -2.0011 21 6 3.9880 4.9384 -3.3356 22 6 4.1952 3.5692 -3.4113 23 17 4.7970 2.8490 -4.8719 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3633 0.5138 0.8901 27 1 1.6887 1.8463 0.8900 28 1 1.6886 1.8464 -0.8899 29 1 3.8515 0.5682 0.8409 30 1 3.9786 2.1764 0.0890 31 1 6.1541 -1.7906 -3.6792 32 1 2.8753 5.0341 -0.1528 33 1 4.1967 5.5763 -4.1817 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001347130310.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:10:38 Heat of formation + Delta-G solvation = 3.418201 kcal Electronic energy + Delta-G solvation = -22947.974865 eV Core-core repulsion = 19256.554490 eV Total energy + Delta-G solvation = -3691.420375 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 318.032 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -39.91245 -38.14813 -37.04629 -36.23783 -35.70257 -34.15044 -33.16262 -31.70552 -30.19696 -29.09387 -26.10485 -25.38989 -23.52942 -23.01841 -22.13233 -20.07496 -17.78804 -16.65037 -16.40239 -16.03055 -15.76762 -15.28451 -14.98646 -14.60399 -14.42435 -14.09239 -13.86207 -13.25885 -13.10538 -12.85733 -12.30426 -12.22644 -11.85462 -11.78728 -11.49652 -11.33137 -11.23107 -11.14504 -10.99094 -10.73305 -10.51605 -10.21410 -10.16428 -9.24997 -9.05767 -8.96749 -8.78085 -8.45425 -8.16507 -7.53621 -7.11617 -3.45496 0.97164 1.55684 2.34332 3.00722 3.13098 3.38689 3.44701 3.65372 3.88016 4.33348 4.36894 4.65513 4.84899 4.89425 5.12748 5.33020 5.54423 5.62540 5.64715 5.74533 5.87335 5.89483 5.95551 6.03850 6.23310 6.36543 6.41496 6.54571 6.93047 7.00338 7.55947 7.68410 8.18030 8.28916 8.81740 9.08601 9.67641 10.24212 Molecular weight = 318.03amu Principal moments of inertia in cm(-1) A = 0.013564 B = 0.006203 C = 0.004730 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2063.818766 B = 4512.612141 C = 5917.960396 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.378 6.378 3 C 0.065 3.935 4 C 0.093 3.907 5 N -0.344 5.344 6 C -0.341 4.341 7 H 0.121 0.879 8 C 0.185 3.815 9 N -0.673 5.673 10 Si 0.874 3.126 11 H -0.260 1.260 12 H -0.263 1.263 13 H -0.291 1.291 14 C 0.368 3.632 15 O -0.582 6.582 16 C 0.111 3.889 17 N -0.479 5.479 18 C 0.124 3.876 19 C -0.146 4.146 20 Cl -0.083 7.083 21 C -0.059 4.059 22 C -0.070 4.070 23 Cl -0.032 7.032 24 H 0.033 0.967 25 H 0.079 0.921 26 H 0.032 0.968 27 H 0.046 0.954 28 H 0.052 0.948 29 H 0.069 0.931 30 H 0.128 0.872 31 H 0.292 0.708 32 H 0.155 0.845 33 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.256 7.659 3.865 10.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.296 6.296 3 C -0.012 4.012 4 C -0.031 4.031 5 N -0.051 5.051 6 C -0.467 4.467 7 H 0.138 0.862 8 C -0.053 4.053 9 N -0.293 5.293 10 Si 0.695 3.305 11 H -0.183 1.183 12 H -0.188 1.188 13 H -0.218 1.218 14 C 0.172 3.828 15 O -0.473 6.473 16 C -0.021 4.021 17 N -0.195 5.195 18 C -0.038 4.038 19 C -0.177 4.177 20 Cl -0.055 7.055 21 C -0.085 4.085 22 C -0.101 4.101 23 Cl -0.003 7.003 24 H 0.052 0.948 25 H 0.097 0.903 26 H 0.051 0.949 27 H 0.065 0.935 28 H 0.071 0.929 29 H 0.088 0.912 30 H 0.145 0.855 31 H 0.104 0.896 32 H 0.172 0.828 33 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -4.878 6.747 3.925 9.205 hybrid contribution -0.640 0.927 -1.335 1.746 sum -5.518 7.674 2.590 9.800 Atomic orbital electron populations 1.22625 0.82637 1.01971 0.99023 1.88031 1.18188 1.28213 1.95184 1.22793 0.94484 0.84072 0.99866 1.22322 0.92617 1.01108 0.87092 1.44277 1.45742 1.06936 1.08179 1.19434 1.45961 0.82804 0.98457 0.86161 1.25250 0.94653 0.89757 0.95638 1.70440 1.19684 1.19149 1.20015 0.87012 0.85192 0.76041 0.82219 1.18343 1.18810 1.21842 1.16704 0.96631 0.83896 0.85579 1.90586 1.60216 1.68859 1.27672 1.21199 0.97138 0.95995 0.87811 1.68386 1.16322 1.10774 1.23970 1.22693 0.95182 0.88957 0.96945 1.21496 1.13650 0.84971 0.97606 1.98309 1.95410 1.13688 1.98081 1.21065 0.97204 0.93166 0.97020 1.21378 1.05686 0.91912 0.91172 1.98365 1.85660 1.83452 1.32794 0.94808 0.90274 0.94929 0.93549 0.92941 0.91216 0.85482 0.89639 0.82811 0.84527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 47. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.50 11.01 101.05 1.11 1.62 16 2 O -0.38 -7.15 10.50 -35.23 -0.37 -7.52 16 3 C 0.07 1.15 5.52 37.16 0.21 1.35 16 4 C 0.09 1.78 5.34 -4.05 -0.02 1.76 16 5 N -0.34 -8.14 2.58 -115.89 -0.30 -8.44 16 6 C -0.34 -8.45 9.34 -15.02 -0.14 -8.59 16 7 H 0.12 2.88 8.00 -52.49 -0.42 2.46 16 8 C 0.19 4.67 3.01 -17.45 -0.05 4.61 16 9 N -0.67 -17.10 13.56 55.50 0.75 -16.35 16 10 Si 0.87 20.57 28.19 -169.99 -4.79 15.78 16 11 H -0.26 -6.25 7.11 56.52 0.40 -5.85 16 12 H -0.26 -6.64 7.11 56.52 0.40 -6.23 16 13 H -0.29 -6.43 7.11 56.52 0.40 -6.03 16 14 C 0.37 9.20 7.51 -12.31 -0.09 9.10 16 15 O -0.58 -15.85 9.92 5.29 0.05 -15.80 16 16 C 0.11 2.42 6.49 -82.99 -0.54 1.89 16 17 N -0.48 -8.88 4.44 -9.76 -0.04 -8.92 16 18 C 0.12 1.95 10.98 -17.51 -0.19 1.76 16 19 C -0.15 -2.30 6.35 -39.20 -0.25 -2.54 16 20 Cl -0.08 -1.10 28.99 -51.86 -1.50 -2.60 16 21 C -0.06 -1.01 9.78 -39.24 -0.38 -1.39 16 22 C -0.07 -1.44 6.37 -38.93 -0.25 -1.68 16 23 Cl -0.03 -0.67 26.05 -51.86 -1.35 -2.02 16 24 H 0.03 0.49 8.14 -51.93 -0.42 0.07 16 25 H 0.08 1.04 8.14 -51.93 -0.42 0.62 16 26 H 0.03 0.40 8.14 -51.93 -0.42 -0.03 16 27 H 0.05 0.68 8.14 -51.93 -0.42 0.26 16 28 H 0.05 1.01 6.94 -51.93 -0.36 0.65 16 29 H 0.07 1.27 7.94 -51.93 -0.41 0.86 16 30 H 0.13 2.35 5.21 -52.72 -0.27 2.07 16 31 H 0.29 6.86 8.31 -40.82 -0.34 6.52 16 32 H 0.15 1.90 8.06 -52.49 -0.42 1.48 16 33 H 0.14 2.05 8.06 -52.49 -0.42 1.63 16 LS Contribution 312.37 15.07 4.71 4.71 Total: -1.00 -28.23 312.37 -6.59 -34.82 By element: Atomic # 1 Polarization: 1.61 SS G_CDS: -3.14 Total: -1.53 kcal Atomic # 6 Polarization: 8.48 SS G_CDS: -0.60 Total: 7.88 kcal Atomic # 7 Polarization: -34.12 SS G_CDS: 0.41 Total: -33.71 kcal Atomic # 8 Polarization: -23.00 SS G_CDS: -0.32 Total: -23.32 kcal Atomic # 14 Polarization: 20.57 SS G_CDS: -4.79 Total: 15.78 kcal Atomic # 17 Polarization: -1.77 SS G_CDS: -2.85 Total: -4.63 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -28.23 -6.59 -34.82 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001347130310.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.238 kcal (2) G-P(sol) polarization free energy of solvation -28.232 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.819 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.418 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds