Wall clock time and date at job start Tue Mar 31 2020 12:07:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35994 * 116.99699 * 2 1 4 4 C 1.38567 * 120.06746 * 0.24000 * 3 2 1 5 5 C 1.38342 * 119.98445 * 180.26961 * 4 3 2 6 6 Cl 1.73601 * 119.93717 * 179.76669 * 5 4 3 7 7 C 1.38353 * 120.12316 * 359.74583 * 5 4 3 8 8 C 1.38241 * 120.13224 * 359.97438 * 7 5 4 9 9 C 1.38554 * 120.01439 * 359.97438 * 8 7 5 10 10 O 1.36016 * 120.06365 * 179.97438 * 9 8 7 11 11 C 1.42900 * 116.99656 * 5.77547 * 10 9 8 12 12 H 1.08994 * 109.47287 * 35.36460 * 11 10 9 13 13 C 1.50701 * 109.46970 * 275.36266 * 11 10 9 14 14 H 1.07995 * 119.99902 * 334.72100 * 13 11 10 15 15 C 1.37872 * 119.99495 * 154.72499 * 13 11 10 16 16 N 1.31517 * 120.00048 * 174.66202 * 15 13 11 17 17 Si 1.86804 * 120.00475 * 354.65438 * 15 13 11 18 18 H 1.48497 * 109.46768 * 94.75535 * 17 15 13 19 19 H 1.48497 * 109.47073 * 214.75479 * 17 15 13 20 20 H 1.48496 * 109.46782 * 334.75816 * 17 15 13 21 21 C 1.50703 * 109.46817 * 155.36452 * 11 10 9 22 22 C 1.38234 * 119.99917 * 215.65346 * 21 11 10 23 23 C 1.38234 * 119.99799 * 179.97438 * 22 21 11 24 24 C 1.38229 * 120.00290 * 359.97438 * 23 22 21 25 25 C 1.38239 * 119.99927 * 0.06695 * 24 23 22 26 26 C 1.38234 * 120.00067 * 359.88957 * 25 24 23 27 27 H 1.08998 * 109.47704 * 59.99525 * 1 2 3 28 28 H 1.08999 * 109.46718 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47047 * 299.99366 * 1 2 3 30 30 H 1.07998 * 120.00847 * 0.04030 * 4 3 2 31 31 H 1.08002 * 119.93152 * 179.97438 * 7 5 4 32 32 H 1.07997 * 119.99379 * 179.97438 * 8 7 5 33 33 H 0.97003 * 120.00525 * 180.02562 * 16 15 13 34 34 H 1.08002 * 120.00174 * 359.97162 * 22 21 11 35 35 H 1.08003 * 119.99426 * 179.71955 * 23 22 21 36 36 H 1.07997 * 120.00244 * 179.97438 * 24 23 22 37 37 H 1.08002 * 120.00029 * 179.97438 * 25 24 23 38 38 H 1.07994 * 119.99830 * 180.10849 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2930 2.3747 0.0050 5 6 1.9227 3.6065 -0.0006 6 17 0.9776 5.0627 -0.0004 7 6 3.3043 3.6799 -0.0060 8 6 4.0608 2.5229 -0.0052 9 6 3.4359 1.2863 0.0015 10 8 4.1792 0.1472 0.0018 11 6 5.5952 0.2967 0.1231 12 1 5.8168 1.1361 0.7821 13 6 6.1914 0.5544 -1.2367 14 1 5.6806 0.2111 -2.1241 15 6 7.3890 1.2285 -1.3477 16 7 7.9619 1.3619 -2.5240 17 14 8.1979 1.9525 0.1725 18 1 9.1909 0.9887 0.7113 19 1 8.8829 3.2199 -0.1873 20 1 7.1628 2.2242 1.2020 21 6 6.1858 -0.9642 0.6998 22 6 7.2620 -0.8909 1.5642 23 6 7.8034 -2.0474 2.0936 24 6 7.2682 -3.2772 1.7590 25 6 6.1925 -3.3506 0.8939 26 6 5.6505 -2.1940 0.3652 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5137 0.8900 30 1 0.2144 2.3196 0.0096 31 1 3.7927 4.6432 -0.0108 32 1 5.1391 2.5828 -0.0098 33 1 8.8047 1.8358 -2.6021 34 1 7.6799 0.0700 1.8259 35 1 8.6471 -1.9903 2.7653 36 1 7.6914 -4.1808 2.1722 37 1 5.7746 -4.3115 0.6321 38 1 4.8090 -2.2513 -0.3093 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001227370371.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:07:56 Heat of formation + Delta-G solvation = -22.080526 kcal Electronic energy + Delta-G solvation = -24049.178790 eV Core-core repulsion = 20462.625900 eV Total energy + Delta-G solvation = -3586.552890 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 318.081 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -40.20062 -38.85905 -37.73473 -36.96014 -35.66590 -33.18386 -31.39049 -30.33332 -30.08994 -29.26441 -27.37559 -27.00449 -23.45991 -22.21545 -22.16850 -21.70446 -20.14238 -18.30041 -17.40655 -16.85304 -16.63769 -15.93661 -15.60973 -15.10131 -14.94827 -14.58776 -14.42350 -13.91189 -13.83270 -13.45948 -13.05272 -12.95705 -12.77473 -12.68364 -12.29512 -12.11268 -12.00654 -11.56958 -11.28600 -11.18738 -11.03341 -10.90642 -10.73386 -10.51509 -10.43603 -10.00583 -9.80341 -9.56196 -8.87958 -8.43917 -8.31066 -7.99316 -7.30258 -6.39010 -4.42135 1.52370 1.62935 1.97538 2.03286 2.34511 3.03463 3.06613 3.15670 3.48211 3.91223 3.96608 4.08951 4.44454 4.92210 5.03909 5.13224 5.23371 5.27994 5.43833 5.45472 5.49974 5.54277 5.55801 5.66174 5.79490 5.98247 6.07612 6.13687 6.17472 6.29416 6.47590 6.56250 6.64742 6.68978 6.92687 7.03321 7.10317 7.15763 7.29172 7.46896 7.62090 8.01765 8.27298 8.73178 9.18403 10.72749 Molecular weight = 318.08amu Principal moments of inertia in cm(-1) A = 0.012788 B = 0.004986 C = 0.003962 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2188.984372 B = 5614.484485 C = 7065.983435 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.300 6.300 3 C 0.092 3.908 4 C -0.170 4.170 5 C -0.049 4.049 6 Cl -0.086 7.086 7 C -0.104 4.104 8 C -0.152 4.152 9 C 0.147 3.853 10 O -0.296 6.296 11 C 0.205 3.795 12 H 0.050 0.950 13 C -0.532 4.532 14 H 0.089 0.911 15 C 0.088 3.912 16 N -0.873 5.873 17 Si 0.850 3.150 18 H -0.262 1.262 19 H -0.280 1.280 20 H -0.256 1.256 21 C -0.040 4.040 22 C -0.132 4.132 23 C -0.121 4.121 24 C -0.142 4.142 25 C -0.123 4.123 26 C -0.096 4.096 27 H 0.052 0.948 28 H 0.097 0.903 29 H 0.051 0.949 30 H 0.137 0.863 31 H 0.132 0.868 32 H 0.154 0.846 33 H 0.270 0.730 34 H 0.109 0.891 35 H 0.113 0.887 36 H 0.112 0.888 37 H 0.114 0.886 38 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.974 -0.287 7.826 12.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.213 6.213 3 C 0.047 3.953 4 C -0.190 4.190 5 C -0.076 4.076 6 Cl -0.058 7.058 7 C -0.123 4.123 8 C -0.171 4.171 9 C 0.099 3.901 10 O -0.208 6.208 11 C 0.150 3.850 12 H 0.067 0.933 13 C -0.569 4.569 14 H 0.107 0.893 15 C -0.118 4.118 16 N -0.509 5.509 17 Si 0.677 3.323 18 H -0.188 1.188 19 H -0.206 1.206 20 H -0.182 1.182 21 C -0.040 4.040 22 C -0.150 4.150 23 C -0.139 4.139 24 C -0.161 4.161 25 C -0.142 4.142 26 C -0.114 4.114 27 H 0.071 0.929 28 H 0.116 0.884 29 H 0.070 0.930 30 H 0.155 0.845 31 H 0.150 0.850 32 H 0.171 0.829 33 H 0.081 0.919 34 H 0.127 0.873 35 H 0.131 0.869 36 H 0.130 0.870 37 H 0.132 0.868 38 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -9.845 -0.488 7.681 12.496 hybrid contribution 0.555 0.871 0.502 1.149 sum -9.289 0.383 8.184 12.386 Atomic orbital electron populations 1.23024 0.79304 1.03648 1.00935 1.86229 1.20353 1.25517 1.89211 1.18070 0.89230 0.84586 1.03426 1.20677 0.99855 0.89962 1.08472 1.20300 0.91446 0.86366 1.09498 1.98322 1.73019 1.37069 1.97342 1.20758 0.91143 0.99087 1.01333 1.21337 1.01824 0.90201 1.03691 1.18293 0.87817 0.87229 0.96774 1.86056 1.21052 1.27531 1.86206 1.19667 0.75585 0.92135 0.97563 0.93282 1.21224 1.07136 1.37514 0.91041 0.89253 1.24862 0.96188 0.95019 0.95734 1.69862 1.17616 1.40321 1.23058 0.87351 0.81014 0.79962 0.84005 1.18778 1.20583 1.18159 1.20148 0.95203 0.95868 0.92811 1.20884 0.97548 0.98212 0.98352 1.20903 0.99784 0.92615 1.00563 1.20916 0.97954 0.97011 1.00174 1.21073 0.96938 0.98006 0.98137 1.20932 0.99813 0.91468 0.99173 0.92906 0.88442 0.93034 0.84524 0.85048 0.82865 0.91919 0.87282 0.86861 0.86979 0.86776 0.85775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 9.81 101.05 0.99 1.28 16 2 O -0.30 -5.02 10.28 -34.24 -0.35 -5.37 16 3 C 0.09 1.65 6.70 -39.12 -0.26 1.38 16 4 C -0.17 -2.60 8.82 -39.42 -0.35 -2.94 16 5 C -0.05 -0.77 6.32 -39.50 -0.25 -1.02 16 6 Cl -0.09 -1.15 28.95 -51.86 -1.50 -2.65 16 7 C -0.10 -1.75 9.82 -39.54 -0.39 -2.13 16 8 C -0.15 -2.96 8.70 -39.46 -0.34 -3.30 16 9 C 0.15 3.00 6.60 -39.13 -0.26 2.74 16 10 O -0.30 -6.64 8.74 -34.31 -0.30 -6.94 16 11 C 0.21 4.75 1.57 -29.03 -0.05 4.70 16 12 H 0.05 1.13 3.45 -51.93 -0.18 0.95 16 13 C -0.53 -14.11 8.23 -34.44 -0.28 -14.39 16 14 H 0.09 2.66 8.06 -52.49 -0.42 2.24 16 15 C 0.09 2.35 5.47 -17.82 -0.10 2.25 16 16 N -0.87 -25.00 13.96 55.43 0.77 -24.23 16 17 Si 0.85 19.37 23.48 -169.99 -3.99 15.37 16 18 H -0.26 -5.87 6.82 56.52 0.39 -5.48 16 19 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 20 H -0.26 -5.40 5.86 56.52 0.33 -5.07 16 21 C -0.04 -0.87 4.92 -104.62 -0.51 -1.38 16 22 C -0.13 -2.69 8.65 -39.58 -0.34 -3.03 16 23 C -0.12 -2.11 10.05 -39.59 -0.40 -2.51 16 24 C -0.14 -2.32 10.05 -39.58 -0.40 -2.72 16 25 C -0.12 -2.12 10.05 -39.58 -0.40 -2.52 16 26 C -0.10 -1.93 9.35 -39.58 -0.37 -2.30 16 27 H 0.05 0.52 7.67 -51.93 -0.40 0.13 16 28 H 0.10 0.86 8.14 -51.93 -0.42 0.44 16 29 H 0.05 0.49 7.65 -51.93 -0.40 0.09 16 30 H 0.14 1.69 6.30 -52.49 -0.33 1.36 16 31 H 0.13 1.93 8.06 -52.49 -0.42 1.51 16 32 H 0.15 3.21 4.92 -52.49 -0.26 2.95 16 33 H 0.27 7.23 8.31 -40.82 -0.34 6.89 16 34 H 0.11 2.20 4.88 -52.49 -0.26 1.94 16 35 H 0.11 1.65 8.06 -52.48 -0.42 1.23 16 36 H 0.11 1.46 8.06 -52.49 -0.42 1.04 16 37 H 0.11 1.62 8.06 -52.49 -0.42 1.20 16 38 H 0.12 2.51 7.65 -52.49 -0.40 2.11 16 LS Contribution 329.57 15.07 4.97 4.97 Total: -1.00 -29.08 329.57 -8.09 -37.17 By element: Atomic # 1 Polarization: 11.55 SS G_CDS: -3.98 Total: 7.57 kcal Atomic # 6 Polarization: -22.18 SS G_CDS: -3.70 Total: -25.89 kcal Atomic # 7 Polarization: -25.00 SS G_CDS: 0.77 Total: -24.23 kcal Atomic # 8 Polarization: -11.66 SS G_CDS: -0.65 Total: -12.32 kcal Atomic # 14 Polarization: 19.37 SS G_CDS: -3.99 Total: 15.37 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -1.50 Total: -2.65 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -29.08 -8.09 -37.17 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001227370371.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.091 kcal (2) G-P(sol) polarization free energy of solvation -29.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.993 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.081 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds