Wall clock time and date at job start Tue Mar 31 2020 11:32:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30994 * 1 3 3 C 1.50700 * 120.00115 * 2 1 4 4 N 1.46501 * 109.47233 * 124.99857 * 3 2 1 5 5 C 1.46501 * 120.00032 * 262.72366 * 4 3 2 6 6 C 1.50699 * 109.46456 * 269.99848 * 5 4 3 7 7 H 1.08001 * 120.00634 * 359.97438 * 6 5 4 8 8 C 1.37881 * 119.99668 * 180.02562 * 6 5 4 9 9 N 1.31512 * 120.00323 * 359.97438 * 8 6 5 10 10 Si 1.86801 * 119.99994 * 179.97438 * 8 6 5 11 11 H 1.48501 * 109.47386 * 0.02562 * 10 8 6 12 12 H 1.48503 * 109.47151 * 119.99637 * 10 8 6 13 13 H 1.48495 * 109.47243 * 239.99762 * 10 8 6 14 14 C 1.34778 * 119.99897 * 82.71547 * 4 3 2 15 15 O 1.21647 * 120.00079 * 182.39032 * 14 4 3 16 16 C 1.47025 * 119.99882 * 2.40214 * 14 4 3 17 17 C 1.35885 * 125.43054 * 168.26675 * 16 14 4 18 18 C 1.41572 * 107.72791 * 179.97438 * 17 16 14 19 19 C 1.40131 * 133.34748 * 180.02562 * 18 17 16 20 20 C 1.36413 * 119.84418 * 179.73268 * 19 18 17 21 21 C 1.39064 * 120.60396 * 0.51818 * 20 19 18 22 22 Cl 1.73601 * 119.69407 * 179.73440 * 21 20 19 23 23 C 1.37797 * 120.61704 * 359.45884 * 21 20 19 24 24 C 1.39204 * 119.80179 * 0.27259 * 23 21 20 25 25 N 1.37483 * 133.16093 * 180.02562 * 24 23 21 26 26 H 0.97000 * 125.61226 * 359.95923 * 25 24 23 27 27 H 1.08005 * 120.00420 * 0.02562 * 1 2 3 28 28 H 1.08006 * 120.00267 * 180.02562 * 1 2 3 29 29 H 1.07998 * 119.99920 * 180.02562 * 2 1 3 30 30 H 1.08996 * 109.46842 * 4.99999 * 3 2 1 31 31 H 1.09004 * 109.46951 * 244.99745 * 3 2 1 32 32 H 1.08990 * 109.47051 * 29.99441 * 5 4 3 33 33 H 1.08994 * 109.47044 * 150.00376 * 5 4 3 34 34 H 0.96998 * 120.00460 * 180.02562 * 9 8 6 35 35 H 1.07992 * 126.13217 * 0.02562 * 17 16 14 36 36 H 1.07993 * 120.07619 * 359.97438 * 19 18 17 37 37 H 1.08004 * 119.69903 * 180.27555 * 20 19 18 38 38 H 1.07999 * 120.10342 * 180.29926 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3099 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 7 2.9937 1.3319 1.1314 5 6 2.6152 2.0074 2.3751 6 6 3.0442 3.4507 2.3133 7 1 3.5487 3.8271 1.4357 8 6 2.7935 4.2905 3.3778 9 7 2.1796 3.8321 4.4467 10 14 3.3259 6.0794 3.3016 11 1 3.9907 6.3431 2.0002 12 1 2.1349 6.9564 3.4350 13 1 4.2746 6.3611 4.4087 14 6 4.1977 0.7350 1.0282 15 8 4.9527 0.7195 1.9819 16 6 4.5987 0.1028 -0.2371 17 6 5.8516 -0.3267 -0.5408 18 6 5.8157 -0.8719 -1.8468 19 6 6.7859 -1.4554 -2.6726 20 6 6.4402 -1.9045 -3.9134 21 6 5.1337 -1.7793 -4.3731 22 17 4.7214 -2.3528 -5.9589 23 6 4.1621 -1.2095 -3.5793 24 6 4.4901 -0.7489 -2.3073 25 7 3.7614 -0.1503 -1.3070 26 1 2.8154 0.0605 -1.3460 27 1 -0.5401 0.9353 -0.0004 28 1 -0.5401 -0.9353 0.0004 29 1 1.8499 -0.9353 -0.0004 30 1 1.3585 2.1316 0.0896 31 1 2.6213 1.4025 -0.9314 32 1 1.5340 1.9548 2.5025 33 1 3.1046 1.5186 3.2175 34 1 2.0029 4.4230 5.1954 35 1 6.7189 -0.2642 0.0997 36 1 7.8041 -1.5529 -2.3259 37 1 7.1889 -2.3579 -4.5461 38 1 3.1490 -1.1208 -3.9428 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000359445202.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:32:15 Heat of formation + Delta-G solvation = 63.393012 kcal Electronic energy + Delta-G solvation = -23555.186995 eV Core-core repulsion = 20004.633267 eV Total energy + Delta-G solvation = -3550.553728 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.78656 -39.12472 -37.39601 -36.34483 -35.90128 -33.45716 -32.27743 -32.19952 -29.92955 -28.98043 -27.66853 -25.94431 -24.30778 -22.58293 -22.07051 -20.86426 -20.48665 -19.23294 -17.85248 -17.17945 -16.62815 -16.19475 -15.41410 -15.22794 -15.15432 -14.74010 -14.44873 -14.21899 -14.05340 -13.87934 -13.33225 -13.14404 -12.86256 -12.71070 -12.27048 -12.14315 -11.93366 -11.48583 -11.47303 -11.30448 -11.06190 -11.03236 -10.95949 -10.72299 -10.30004 -9.88763 -9.77153 -9.55901 -9.40611 -8.53166 -8.34846 -8.03533 -7.75074 -6.14164 -4.19907 0.63122 1.37294 1.90091 2.03656 2.18092 3.02927 3.24449 3.32591 3.35900 3.55855 3.65785 3.82958 4.36612 4.51322 4.63288 4.84251 4.90325 5.03255 5.07051 5.12744 5.19654 5.20590 5.30440 5.41746 5.69639 5.73186 5.82488 5.88827 6.04587 6.25482 6.38118 6.45597 6.55722 6.58691 6.80572 6.94194 7.25108 7.29197 7.36538 7.81264 8.08467 8.11332 8.67385 8.86701 9.45805 10.93948 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.019444 B = 0.003160 C = 0.002971 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1439.673045 B = 8860.029039 C = 9422.025069 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.207 4.207 3 C 0.117 3.883 4 N -0.585 5.585 5 C 0.247 3.753 6 C -0.532 4.532 7 H 0.059 0.941 8 C 0.063 3.937 9 N -0.892 5.892 10 Si 0.899 3.101 11 H -0.273 1.273 12 H -0.283 1.283 13 H -0.281 1.281 14 C 0.569 3.431 15 O -0.515 6.515 16 C 0.046 3.954 17 C -0.125 4.125 18 C -0.110 4.110 19 C -0.048 4.048 20 C -0.144 4.144 21 C -0.012 4.012 22 Cl -0.074 7.074 23 C -0.118 4.118 24 C 0.106 3.894 25 N -0.581 5.581 26 H 0.429 0.571 27 H 0.105 0.895 28 H 0.101 0.899 29 H 0.110 0.890 30 H 0.103 0.897 31 H 0.077 0.923 32 H 0.036 0.964 33 H 0.049 0.951 34 H 0.264 0.736 35 H 0.158 0.842 36 H 0.134 0.866 37 H 0.132 0.868 38 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.382 -11.567 -17.683 21.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C -0.226 4.226 3 C -0.008 4.008 4 N -0.315 5.315 5 C 0.128 3.872 6 C -0.571 4.571 7 H 0.078 0.922 8 C -0.139 4.139 9 N -0.531 5.531 10 Si 0.727 3.273 11 H -0.197 1.197 12 H -0.209 1.209 13 H -0.207 1.207 14 C 0.355 3.645 15 O -0.390 6.390 16 C -0.065 4.065 17 C -0.151 4.151 18 C -0.115 4.115 19 C -0.067 4.067 20 C -0.164 4.164 21 C -0.040 4.040 22 Cl -0.046 7.046 23 C -0.140 4.140 24 C -0.006 4.006 25 N -0.196 5.196 26 H 0.280 0.720 27 H 0.123 0.877 28 H 0.119 0.881 29 H 0.128 0.872 30 H 0.121 0.879 31 H 0.094 0.906 32 H 0.054 0.946 33 H 0.067 0.933 34 H 0.074 0.926 35 H 0.175 0.825 36 H 0.152 0.848 37 H 0.150 0.850 38 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.475 -11.460 -17.016 20.568 hybrid contribution -0.377 1.026 -0.175 1.107 sum 1.098 -10.434 -17.191 20.139 Atomic orbital electron populations 1.23970 0.95564 1.02442 0.97036 1.23572 0.97088 0.98876 1.03107 1.21006 0.93601 0.96129 0.90066 1.48211 1.13794 1.53071 1.16419 1.19413 0.96190 0.91811 0.79766 1.21446 1.38773 0.94253 1.02602 0.92236 1.24932 0.94917 0.99098 0.95002 1.69935 1.41302 1.36007 1.05823 0.86419 0.78362 0.84253 0.78273 1.19731 1.20916 1.20734 1.17178 0.82561 0.79248 0.85523 1.90835 1.51476 1.59454 1.37272 1.20770 0.91234 1.04969 0.89493 1.20886 0.96570 1.02470 0.95176 1.18314 0.92995 1.04560 0.95598 1.20334 0.98638 0.95491 0.92264 1.20431 0.94544 1.04417 0.97038 1.20391 0.94485 1.02018 0.87092 1.98359 1.93960 1.87642 1.24591 1.19753 0.99591 1.03064 0.91563 1.18161 0.91932 0.99693 0.90765 1.43713 1.12222 1.51428 1.12199 0.72021 0.87675 0.88106 0.87187 0.87920 0.90554 0.94588 0.93329 0.92617 0.82486 0.84840 0.85040 0.85130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.66 14.32 29.02 0.42 -1.24 16 2 C -0.21 -2.63 7.90 -36.02 -0.28 -2.92 16 3 C 0.12 1.78 5.40 -5.19 -0.03 1.75 16 4 N -0.58 -11.93 2.46 -177.86 -0.44 -12.37 16 5 C 0.25 6.19 5.15 -5.19 -0.03 6.17 16 6 C -0.53 -14.58 9.39 -34.44 -0.32 -14.90 16 7 H 0.06 1.64 7.81 -52.49 -0.41 1.23 16 8 C 0.06 1.75 5.46 -17.82 -0.10 1.65 16 9 N -0.89 -25.77 13.29 55.43 0.74 -25.03 16 10 Si 0.90 21.34 29.54 -169.99 -5.02 16.32 16 11 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 12 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 13 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 14 C 0.57 11.86 7.57 -12.70 -0.10 11.76 16 15 O -0.51 -12.72 16.43 5.24 0.09 -12.63 16 16 C 0.05 0.76 6.56 -82.28 -0.54 0.22 16 17 C -0.12 -1.91 10.55 -39.16 -0.41 -2.33 16 18 C -0.11 -1.47 6.16 -106.92 -0.66 -2.13 16 19 C -0.05 -0.52 10.06 -39.53 -0.40 -0.92 16 20 C -0.14 -1.45 9.74 -39.93 -0.39 -1.84 16 21 C -0.01 -0.13 6.32 -39.44 -0.25 -0.37 16 22 Cl -0.07 -0.71 28.93 -51.86 -1.50 -2.21 16 23 C -0.12 -1.32 9.84 -39.38 -0.39 -1.71 16 24 C 0.11 1.38 7.25 -83.98 -0.61 0.77 16 25 N -0.58 -7.93 4.51 -7.35 -0.03 -7.96 16 26 H 0.43 5.16 3.46 -40.82 -0.14 5.02 16 27 H 0.11 1.09 7.84 -52.48 -0.41 0.68 16 28 H 0.10 0.92 8.06 -52.48 -0.42 0.50 16 29 H 0.11 1.40 7.35 -52.49 -0.39 1.01 16 30 H 0.10 1.57 7.67 -51.93 -0.40 1.17 16 31 H 0.08 1.04 5.13 -51.93 -0.27 0.78 16 32 H 0.04 0.91 8.07 -51.93 -0.42 0.49 16 33 H 0.05 1.38 7.39 -51.93 -0.38 1.00 16 34 H 0.26 7.19 8.31 -40.82 -0.34 6.85 16 35 H 0.16 2.28 8.06 -52.49 -0.42 1.86 16 36 H 0.13 1.13 8.06 -52.49 -0.42 0.70 16 37 H 0.13 1.03 8.06 -52.48 -0.42 0.61 16 38 H 0.13 1.21 8.06 -52.49 -0.42 0.79 16 LS Contribution 341.45 15.07 5.15 5.15 Total: -1.00 -31.35 341.45 -9.17 -40.52 By element: Atomic # 1 Polarization: 8.32 SS G_CDS: -4.06 Total: 4.25 kcal Atomic # 6 Polarization: -1.95 SS G_CDS: -4.08 Total: -6.04 kcal Atomic # 7 Polarization: -45.63 SS G_CDS: 0.27 Total: -45.36 kcal Atomic # 8 Polarization: -12.72 SS G_CDS: 0.09 Total: -12.63 kcal Atomic # 14 Polarization: 21.34 SS G_CDS: -5.02 Total: 16.32 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -1.50 Total: -2.21 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -31.35 -9.17 -40.52 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000359445202.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.915 kcal (2) G-P(sol) polarization free energy of solvation -31.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.522 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.393 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds