Wall clock time and date at job start Tue Mar 31 2020 11:35:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53003 * 109.46903 * 2 1 4 4 N 1.46500 * 109.46604 * 180.02562 * 3 2 1 5 5 C 1.36702 * 120.00335 * 264.53023 * 4 3 2 6 6 H 1.07996 * 120.00357 * 131.52094 * 5 4 3 7 7 C 1.39168 * 119.99778 * 311.52598 * 5 4 3 8 8 N 1.31286 * 119.99992 * 3.47835 * 7 5 4 9 9 Si 1.86801 * 119.99982 * 183.48278 * 7 5 4 10 10 H 1.48503 * 109.47118 * 359.97438 * 9 7 5 11 11 H 1.48500 * 109.47070 * 119.99561 * 9 7 5 12 12 H 1.48500 * 109.47178 * 239.99655 * 9 7 5 13 13 C 1.34778 * 120.00102 * 84.53815 * 4 3 2 14 14 O 1.21565 * 120.00148 * 4.49281 * 13 4 3 15 15 C 1.48014 * 120.00166 * 184.50367 * 13 4 3 16 16 N 1.32024 * 119.26257 * 354.34993 * 15 13 4 17 17 C 1.33242 * 121.30477 * 180.02562 * 16 15 13 18 18 C 1.40838 * 120.96154 * 179.97438 * 17 16 15 19 19 C 1.35992 * 119.74042 * 180.02562 * 18 17 16 20 20 C 1.39431 * 121.08776 * 359.97438 * 19 18 17 21 21 C 1.36144 * 120.92087 * 0.06380 * 20 19 18 22 22 C 1.40422 * 119.65193 * 359.91376 * 21 20 19 23 23 C 1.40723 * 121.25541 * 180.02562 * 22 21 20 24 24 C 1.36622 * 118.25640 * 180.29536 * 23 22 21 25 25 Cl 1.73600 * 120.10601 * 179.72306 * 24 23 22 26 26 H 1.09005 * 109.47258 * 300.00123 * 1 2 3 27 27 H 1.09002 * 109.47435 * 59.99582 * 1 2 3 28 28 H 1.08994 * 109.47212 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.46834 * 240.00510 * 2 1 3 30 30 H 1.08995 * 109.46799 * 119.99864 * 2 1 3 31 31 H 1.08994 * 109.47202 * 60.00608 * 3 2 1 32 32 H 1.08995 * 109.47282 * 299.99568 * 3 2 1 33 33 H 0.97007 * 119.99889 * 180.02562 * 8 7 5 34 34 H 1.07999 * 120.12493 * 0.04154 * 18 17 16 35 35 H 1.08007 * 119.45655 * 179.97438 * 19 18 17 36 36 H 1.08003 * 119.53893 * 179.97438 * 20 19 18 37 37 H 1.07991 * 120.17567 * 179.97438 * 21 20 19 38 38 H 1.07992 * 120.87067 * 0.02650 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 7 3.5049 1.4425 -0.0006 5 6 4.1890 1.5551 1.1776 6 1 4.9960 0.8730 1.4008 7 6 3.8454 2.5487 2.0894 8 7 2.8211 3.3341 1.8494 9 14 4.8417 2.7650 3.6547 10 1 5.9356 1.7612 3.6878 11 1 5.4221 4.1315 3.6872 12 1 3.9592 2.5738 4.8336 13 6 4.1783 1.3315 -1.1628 14 8 3.5729 1.3137 -2.2168 15 6 5.6551 1.2310 -1.1559 16 7 6.3056 1.3642 -0.0148 17 6 7.6344 1.2817 0.0383 18 6 8.3211 1.4254 1.2595 19 6 9.6779 1.3371 1.2850 20 6 10.4063 1.1052 0.1190 21 6 9.7791 0.9616 -1.0808 22 6 8.3789 1.0459 -1.1472 23 6 7.6960 0.9020 -2.3692 24 6 6.3334 1.0012 -2.3641 25 17 5.4429 0.8387 -3.8455 26 1 -0.3634 0.5139 0.8900 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3633 -1.0276 -0.0005 29 1 1.8933 -0.5138 -0.8901 30 1 1.8932 -0.5138 0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6767 1.9563 -0.8900 33 1 2.5819 4.0270 2.4849 34 1 7.7722 1.6048 2.1722 35 1 10.1998 1.4485 2.2240 36 1 11.4832 1.0401 0.1680 37 1 10.3551 0.7827 -1.9765 38 1 8.2351 0.7223 -3.2875 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000361607723.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:35:48 Heat of formation + Delta-G solvation = 35.199977 kcal Electronic energy + Delta-G solvation = -24430.948842 eV Core-core repulsion = 20879.172572 eV Total energy + Delta-G solvation = -3551.776270 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -40.55307 -38.56531 -36.72449 -35.79127 -35.02986 -33.21335 -32.73682 -31.27486 -30.11076 -29.62816 -26.07547 -25.15261 -23.90487 -23.10258 -21.88240 -20.93096 -19.49398 -18.19357 -17.52791 -17.21100 -15.86977 -15.25722 -14.83270 -14.59052 -14.40056 -14.32268 -14.06308 -13.89022 -13.44679 -13.36999 -13.00174 -12.82807 -12.42385 -11.97699 -11.62404 -11.52853 -11.39522 -11.29042 -11.24465 -11.04046 -10.97628 -10.81097 -10.57891 -10.30095 -10.24393 -9.96674 -9.71411 -9.24882 -8.77562 -8.33214 -8.19165 -8.00199 -7.32869 -6.32064 -4.03035 0.53951 0.90393 2.19606 2.56772 2.85743 3.14939 3.21062 3.24944 3.98201 4.09462 4.39676 4.62854 4.72206 4.77462 4.95562 5.04236 5.10209 5.23983 5.32989 5.47081 5.73867 5.82676 5.87791 5.93910 5.96656 6.06823 6.16269 6.34206 6.47697 6.54519 6.55754 6.57135 6.69425 6.73675 6.85232 6.99697 7.15273 7.42779 7.65869 8.03287 8.28937 8.53404 9.07723 9.43682 9.88990 10.66061 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.010707 B = 0.006838 C = 0.004432 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2614.397897 B = 4093.725035 C = 6316.469083 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.134 4.134 3 C 0.109 3.891 4 N -0.406 5.406 5 C -0.287 4.287 6 H 0.113 0.887 7 C 0.040 3.960 8 N -0.867 5.867 9 Si 0.919 3.081 10 H -0.263 1.263 11 H -0.280 1.280 12 H -0.283 1.283 13 C 0.499 3.501 14 O -0.580 6.580 15 C 0.144 3.856 16 N -0.383 5.383 17 C 0.114 3.886 18 C -0.080 4.080 19 C -0.114 4.114 20 C -0.119 4.119 21 C -0.100 4.100 22 C -0.094 4.094 23 C -0.080 4.080 24 C -0.044 4.044 25 Cl -0.030 7.030 26 H 0.052 0.948 27 H 0.050 0.950 28 H 0.044 0.956 29 H 0.051 0.949 30 H 0.057 0.943 31 H 0.117 0.883 32 H 0.054 0.946 33 H 0.269 0.731 34 H 0.137 0.863 35 H 0.126 0.874 36 H 0.123 0.877 37 H 0.126 0.874 38 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.138 -4.386 -1.905 11.210 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.173 4.173 3 C -0.013 4.013 4 N -0.122 5.122 5 C -0.418 4.418 6 H 0.130 0.870 7 C -0.165 4.165 8 N -0.504 5.504 9 Si 0.746 3.254 10 H -0.187 1.187 11 H -0.206 1.206 12 H -0.209 1.209 13 C 0.287 3.713 14 O -0.464 6.464 15 C -0.010 4.010 16 N -0.095 5.095 17 C -0.009 4.009 18 C -0.099 4.099 19 C -0.134 4.134 20 C -0.138 4.138 21 C -0.119 4.119 22 C -0.097 4.097 23 C -0.107 4.107 24 C -0.074 4.074 25 Cl 0.000 7.000 26 H 0.071 0.929 27 H 0.069 0.931 28 H 0.063 0.937 29 H 0.070 0.930 30 H 0.076 0.924 31 H 0.134 0.866 32 H 0.073 0.927 33 H 0.080 0.920 34 H 0.155 0.845 35 H 0.144 0.856 36 H 0.141 0.859 37 H 0.144 0.856 38 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 9.192 -4.086 -1.625 10.190 hybrid contribution 0.993 0.151 -0.027 1.005 sum 10.185 -3.935 -1.652 11.043 Atomic orbital electron populations 1.21637 0.96441 1.00388 1.01470 1.21843 0.94880 0.99336 1.01224 1.21696 0.80892 0.94487 1.04265 1.43472 1.05095 1.58617 1.05036 1.20091 1.14700 1.13431 0.93552 0.86987 1.25619 0.96107 0.94924 0.99870 1.69683 1.25214 1.18914 1.36614 0.85993 0.80065 0.78559 0.80800 1.18693 1.20621 1.20895 1.18008 0.84572 0.83921 0.84825 1.90726 1.68053 1.57224 1.30404 1.21641 0.96609 0.95840 0.86882 1.69472 1.05834 1.09165 1.25006 1.19450 0.90486 0.97968 0.92949 1.20979 0.93935 0.98124 0.96881 1.20841 0.93884 1.00192 0.98501 1.20839 0.99873 1.00464 0.92582 1.20873 0.92469 1.00258 0.98323 1.18867 0.94763 1.02575 0.93486 1.21186 0.92030 0.99471 0.97994 1.21717 0.92629 1.03191 0.89881 1.98381 1.75481 1.95437 1.30739 0.92893 0.93122 0.93697 0.92980 0.92403 0.86563 0.92743 0.91989 0.84502 0.85641 0.85946 0.85638 0.83888 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.38 9.91 37.16 0.37 -2.01 16 2 C -0.13 -2.74 6.22 -26.73 -0.17 -2.91 16 3 C 0.11 2.60 4.88 -4.04 -0.02 2.58 16 4 N -0.41 -10.34 2.50 -115.84 -0.29 -10.63 16 5 C -0.29 -7.28 7.42 -15.04 -0.11 -7.39 16 6 H 0.11 2.82 6.01 -52.49 -0.32 2.50 16 7 C 0.04 1.00 5.35 -17.44 -0.09 0.91 16 8 N -0.87 -22.67 11.01 55.51 0.61 -22.06 16 9 Si 0.92 19.56 29.56 -169.99 -5.02 14.54 16 10 H -0.26 -5.29 7.05 56.52 0.40 -4.89 16 11 H -0.28 -6.05 7.11 56.52 0.40 -5.65 16 12 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 13 C 0.50 12.57 7.56 -12.25 -0.09 12.48 16 14 O -0.58 -15.07 13.53 5.31 0.07 -14.99 16 15 C 0.14 3.27 6.67 -82.94 -0.55 2.71 16 16 N -0.38 -8.44 6.29 -7.53 -0.05 -8.48 16 17 C 0.11 2.14 6.61 -84.84 -0.56 1.58 16 18 C -0.08 -1.30 9.99 -39.40 -0.39 -1.70 16 19 C -0.11 -1.44 9.94 -39.94 -0.40 -1.84 16 20 C -0.12 -1.36 9.96 -39.89 -0.40 -1.76 16 21 C -0.10 -1.26 9.77 -39.51 -0.39 -1.64 16 22 C -0.09 -1.52 5.75 -106.71 -0.61 -2.13 16 23 C -0.08 -1.29 9.65 -39.23 -0.38 -1.67 16 24 C -0.04 -0.86 6.32 -39.33 -0.25 -1.11 16 25 Cl -0.03 -0.56 25.93 -51.86 -1.34 -1.90 16 26 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 27 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 28 H 0.04 0.66 8.14 -51.93 -0.42 0.23 16 29 H 0.05 1.10 8.14 -51.93 -0.42 0.68 16 30 H 0.06 1.19 8.14 -51.93 -0.42 0.76 16 31 H 0.12 2.92 5.55 -51.93 -0.29 2.63 16 32 H 0.05 1.35 7.53 -51.93 -0.39 0.96 16 33 H 0.27 6.67 8.31 -40.82 -0.34 6.33 16 34 H 0.14 2.26 8.01 -52.49 -0.42 1.84 16 35 H 0.13 1.22 8.06 -52.48 -0.42 0.80 16 36 H 0.12 1.01 8.06 -52.48 -0.42 0.58 16 37 H 0.13 1.19 8.06 -52.49 -0.42 0.77 16 38 H 0.14 1.78 8.06 -52.49 -0.42 1.35 16 LS Contribution 334.41 15.07 5.04 5.04 Total: -1.00 -28.81 334.41 -9.38 -38.19 By element: Atomic # 1 Polarization: 8.54 SS G_CDS: -4.36 Total: 4.18 kcal Atomic # 6 Polarization: 0.16 SS G_CDS: -4.04 Total: -3.88 kcal Atomic # 7 Polarization: -41.44 SS G_CDS: 0.27 Total: -41.17 kcal Atomic # 8 Polarization: -15.07 SS G_CDS: 0.07 Total: -14.99 kcal Atomic # 14 Polarization: 19.56 SS G_CDS: -5.02 Total: 14.54 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.34 Total: -1.90 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -28.81 -9.38 -38.19 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000361607723.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.394 kcal (2) G-P(sol) polarization free energy of solvation -28.810 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.194 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.200 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds