Wall clock time and date at job start Tue Mar 31 2020 12:14:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 N 1.46502 * 109.47031 * 2 1 4 4 C 1.46500 * 119.99590 * 85.94512 * 3 2 1 5 5 C 1.50701 * 109.46956 * 90.00296 * 4 3 2 6 6 H 1.07999 * 120.00067 * 359.97438 * 5 4 3 7 7 C 1.37878 * 119.99914 * 179.97438 * 5 4 3 8 8 N 1.31512 * 120.00027 * 0.02562 * 7 5 4 9 9 Si 1.86803 * 119.99909 * 179.97438 * 7 5 4 10 10 H 1.48493 * 109.46849 * 0.02562 * 9 7 5 11 11 H 1.48503 * 109.46653 * 120.00423 * 9 7 5 12 12 H 1.48504 * 109.46978 * 240.00437 * 9 7 5 13 13 C 1.34774 * 119.99786 * 265.94630 * 3 2 1 14 14 O 1.21549 * 119.99862 * 184.60362 * 13 3 2 15 15 C 1.47905 * 120.00485 * 4.60611 * 13 3 2 16 16 C 1.38903 * 121.10725 * 301.24840 * 15 13 3 17 17 C 1.39255 * 119.58312 * 180.02562 * 16 15 13 18 18 N 1.30997 * 121.88077 * 359.96938 * 17 16 15 19 19 C 1.33539 * 121.82875 * 0.03037 * 18 17 16 20 20 C 1.40684 * 120.96038 * 180.02562 * 19 18 17 21 21 C 1.36173 * 119.73519 * 179.20392 * 20 19 18 22 22 Cl 1.73597 * 119.48973 * 180.25833 * 21 20 19 23 23 C 1.39480 * 121.02440 * 0.72767 * 21 20 19 24 24 C 1.36221 * 120.82524 * 359.52877 * 23 21 20 25 25 C 1.40120 * 119.65554 * 359.97438 * 24 23 21 26 26 H 1.08996 * 109.46862 * 60.00318 * 1 2 3 27 27 H 1.09000 * 109.47152 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47144 * 299.99805 * 1 2 3 29 29 H 1.09001 * 109.46814 * 120.00165 * 2 1 3 30 30 H 1.08998 * 109.47144 * 240.00195 * 2 1 3 31 31 H 1.09007 * 109.46589 * 210.00021 * 4 3 2 32 32 H 1.08996 * 109.47436 * 330.00099 * 4 3 2 33 33 H 0.96994 * 120.00260 * 179.97438 * 8 7 5 34 34 H 1.08000 * 120.20538 * 359.97438 * 16 15 13 35 35 H 1.07998 * 119.05565 * 180.02562 * 17 16 15 36 36 H 1.07998 * 120.13069 * 359.95351 * 20 19 18 37 37 H 1.08004 * 119.59103 * 179.50211 * 23 21 20 38 38 H 1.07997 * 120.16962 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.1779 2.1017 1.2656 5 6 3.5689 1.8763 1.8000 6 1 4.2643 1.2580 1.2519 7 6 3.9536 2.4596 2.9886 8 7 3.1066 3.2122 3.6562 9 14 5.6776 2.1797 3.6513 10 1 6.4293 1.3011 2.7197 11 1 6.3778 3.4834 3.7753 12 1 5.5960 1.5327 4.9855 13 6 2.3208 1.9890 -1.1643 14 8 2.8045 3.1041 -1.1600 15 6 2.0640 1.2993 -2.4472 16 6 2.6500 0.0726 -2.7324 17 6 2.3866 -0.5485 -3.9506 18 7 1.5962 -0.0094 -4.8454 19 6 0.9987 1.1670 -4.6399 20 6 0.1528 1.7289 -5.6135 21 6 -0.4566 2.9223 -5.3712 22 17 -1.5044 3.6067 -6.5743 23 6 -0.2444 3.6082 -4.1754 24 6 0.5723 3.0964 -3.2127 25 6 1.2073 1.8655 -3.4247 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 1.8933 -0.5139 0.8900 30 1 1.8934 -0.5138 -0.8900 31 1 2.0208 3.1675 1.0992 32 1 1.4477 1.7350 1.9870 33 1 3.3771 3.6222 4.4926 34 1 3.3064 -0.3960 -2.0141 35 1 2.8464 -1.5023 -4.1632 36 1 -0.0221 1.2100 -6.5444 37 1 -0.7333 4.5570 -4.0107 38 1 0.7294 3.6367 -2.2908 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000930464024.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:14:58 Heat of formation + Delta-G solvation = 16.642574 kcal Electronic energy + Delta-G solvation = -23887.175882 eV Core-core repulsion = 20334.594903 eV Total energy + Delta-G solvation = -3552.580979 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.19448 -39.01984 -37.66280 -36.33106 -35.49015 -33.64367 -32.71115 -30.66076 -30.29816 -30.18851 -27.43020 -25.03275 -23.93858 -23.45029 -23.00051 -21.96683 -19.26976 -18.38305 -17.62599 -16.95437 -16.48136 -16.03491 -15.61379 -15.29843 -14.67343 -14.45754 -14.41083 -14.23423 -13.99449 -13.58511 -13.42160 -13.09841 -12.97896 -12.38503 -12.19221 -12.09434 -11.83958 -11.67506 -11.39548 -11.30370 -11.20657 -10.97666 -10.82117 -10.73728 -10.31848 -10.22894 -10.00739 -9.71929 -9.12312 -8.87143 -8.52544 -8.40569 -7.86259 -6.13041 -4.18128 0.05060 0.53603 1.63481 1.81635 2.61087 3.10792 3.24859 3.32976 3.35940 3.57811 3.89135 4.10504 4.36223 4.44967 4.60815 4.64080 4.73999 4.80680 5.00776 5.21449 5.23156 5.31302 5.37914 5.53588 5.61866 5.66726 5.70977 5.78145 5.93621 5.96779 6.13773 6.16815 6.27897 6.40069 6.49411 6.89574 7.26741 7.35705 7.68291 7.82154 8.11080 8.16071 8.67836 8.87928 9.47237 10.95189 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.019895 B = 0.003428 C = 0.003223 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1407.058610 B = 8166.975379 C = 8684.297199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.093 3.907 3 N -0.582 5.582 4 C 0.247 3.753 5 C -0.528 4.528 6 H 0.059 0.941 7 C 0.062 3.938 8 N -0.893 5.893 9 Si 0.899 3.101 10 H -0.273 1.273 11 H -0.282 1.282 12 H -0.283 1.283 13 C 0.544 3.456 14 O -0.521 6.521 15 C -0.036 4.036 16 C -0.152 4.152 17 C 0.140 3.860 18 N -0.471 5.471 19 C 0.139 3.861 20 C -0.089 4.089 21 C -0.011 4.011 22 Cl -0.066 7.066 23 C -0.116 4.116 24 C -0.064 4.064 25 C -0.075 4.075 26 H 0.048 0.952 27 H 0.061 0.939 28 H 0.063 0.937 29 H 0.086 0.914 30 H 0.074 0.926 31 H 0.044 0.956 32 H 0.037 0.963 33 H 0.264 0.736 34 H 0.150 0.850 35 H 0.167 0.833 36 H 0.146 0.854 37 H 0.140 0.860 38 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.951 -6.692 -15.750 18.870 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C -0.031 4.031 3 N -0.312 5.312 4 C 0.128 3.872 5 C -0.567 4.567 6 H 0.077 0.923 7 C -0.140 4.140 8 N -0.532 5.532 9 Si 0.726 3.274 10 H -0.198 1.198 11 H -0.208 1.208 12 H -0.209 1.209 13 C 0.329 3.671 14 O -0.398 6.398 15 C -0.048 4.048 16 C -0.172 4.172 17 C -0.032 4.032 18 N -0.179 5.179 19 C 0.017 3.983 20 C -0.108 4.108 21 C -0.040 4.040 22 Cl -0.037 7.037 23 C -0.135 4.135 24 C -0.082 4.082 25 C -0.078 4.078 26 H 0.067 0.933 27 H 0.080 0.920 28 H 0.082 0.918 29 H 0.105 0.895 30 H 0.092 0.908 31 H 0.062 0.938 32 H 0.055 0.945 33 H 0.073 0.927 34 H 0.167 0.833 35 H 0.184 0.816 36 H 0.164 0.836 37 H 0.158 0.842 38 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -8.034 -6.272 -16.463 19.363 hybrid contribution 1.065 0.299 1.214 1.642 sum -6.969 -5.973 -15.250 17.799 Atomic orbital electron populations 1.22171 0.96484 1.01616 1.02302 1.21747 0.94050 0.83976 1.03328 1.48270 1.61930 1.13554 1.07466 1.19370 0.97164 0.92988 0.77668 1.21421 0.98073 1.31050 1.06131 0.92294 1.24930 0.97662 0.94809 0.96615 1.69929 1.35094 1.32202 1.15983 0.86430 0.84177 0.78131 0.78620 1.19760 1.20823 1.20912 1.17969 0.80026 0.86070 0.83073 1.90822 1.43201 1.19059 1.86696 1.20797 0.94639 0.94145 0.95200 1.22441 1.01089 0.94606 0.99095 1.22922 0.92666 0.99071 0.88507 1.67768 1.08136 1.09863 1.32158 1.18512 0.96546 0.91382 0.91850 1.20571 0.96282 0.94298 0.99641 1.20581 0.96516 0.95229 0.91629 1.98378 1.65090 1.84623 1.55612 1.20824 0.99790 1.00895 0.91966 1.21164 0.93574 0.93687 0.99819 1.18681 0.98324 0.96354 0.94396 0.93277 0.92021 0.91831 0.89534 0.90830 0.93812 0.94516 0.92661 0.83271 0.81579 0.83579 0.84205 0.83527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.25 10.24 37.16 0.38 -1.87 16 2 C 0.09 1.41 5.95 -4.04 -0.02 1.39 16 3 N -0.58 -11.60 2.46 -176.15 -0.43 -12.03 16 4 C 0.25 6.10 5.15 -5.19 -0.03 6.07 16 5 C -0.53 -14.34 9.39 -34.44 -0.32 -14.67 16 6 H 0.06 1.60 7.81 -52.49 -0.41 1.19 16 7 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 8 N -0.89 -25.70 13.29 55.43 0.74 -24.97 16 9 Si 0.90 21.25 29.54 -169.99 -5.02 16.23 16 10 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 11 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 12 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 13 C 0.54 10.90 6.34 -12.30 -0.08 10.82 16 14 O -0.52 -12.59 15.79 5.32 0.08 -12.50 16 15 C -0.04 -0.58 5.05 -104.34 -0.53 -1.10 16 16 C -0.15 -1.94 7.72 -38.96 -0.30 -2.24 16 17 C 0.14 1.55 11.14 -17.53 -0.20 1.36 16 18 N -0.47 -6.15 10.30 -11.01 -0.11 -6.26 16 19 C 0.14 1.93 6.61 -84.87 -0.56 1.37 16 20 C -0.09 -1.07 9.73 -39.40 -0.38 -1.45 16 21 C -0.01 -0.13 6.27 -39.86 -0.25 -0.38 16 22 Cl -0.07 -0.66 28.91 -51.86 -1.50 -2.16 16 23 C -0.12 -1.41 9.73 -39.84 -0.39 -1.80 16 24 C -0.06 -0.92 9.30 -39.60 -0.37 -1.29 16 25 C -0.07 -1.13 5.76 -106.51 -0.61 -1.75 16 26 H 0.05 0.67 8.14 -51.93 -0.42 0.25 16 27 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 28 H 0.06 0.92 8.14 -51.93 -0.42 0.50 16 29 H 0.09 1.34 8.10 -51.93 -0.42 0.92 16 30 H 0.07 0.94 4.21 -51.93 -0.22 0.73 16 31 H 0.04 1.22 7.49 -51.93 -0.39 0.83 16 32 H 0.04 0.92 8.07 -51.93 -0.42 0.50 16 33 H 0.26 7.16 8.31 -40.82 -0.34 6.83 16 34 H 0.15 1.68 7.23 -52.49 -0.38 1.30 16 35 H 0.17 1.19 8.06 -52.49 -0.42 0.77 16 36 H 0.15 1.52 8.06 -52.49 -0.42 1.09 16 37 H 0.14 1.41 8.06 -52.48 -0.42 0.98 16 38 H 0.15 2.33 6.68 -52.49 -0.35 1.98 16 LS Contribution 341.92 15.07 5.15 5.15 Total: -1.00 -31.63 341.92 -9.11 -40.74 By element: Atomic # 1 Polarization: 3.98 SS G_CDS: -4.26 Total: -0.28 kcal Atomic # 6 Polarization: -0.16 SS G_CDS: -3.76 Total: -3.92 kcal Atomic # 7 Polarization: -43.45 SS G_CDS: 0.19 Total: -43.26 kcal Atomic # 8 Polarization: -12.59 SS G_CDS: 0.08 Total: -12.50 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.23 kcal Atomic # 17 Polarization: -0.66 SS G_CDS: -1.50 Total: -2.16 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -31.63 -9.11 -40.74 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000930464024.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.384 kcal (2) G-P(sol) polarization free energy of solvation -31.634 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.750 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.107 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.742 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds