Wall clock time and date at job start Tue Mar 31 2020 12:35:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35665 * 117.00425 * 2 1 4 4 C 1.38823 * 119.62810 * 179.97438 * 3 2 1 5 5 C 1.38742 * 119.26930 * 179.97438 * 4 3 2 6 6 Cl 1.73601 * 120.72796 * 179.97438 * 5 4 3 7 7 C 1.38652 * 118.54133 * 0.02562 * 5 4 3 8 8 C 1.39024 * 119.19931 * 0.27183 * 7 5 4 9 9 N 1.38829 * 119.66540 * 179.72679 * 8 7 5 10 10 C 1.36914 * 120.00550 * 4.99903 * 9 8 7 11 11 H 1.08001 * 119.99428 * 319.08491 * 10 9 8 12 12 C 1.38805 * 120.00346 * 139.08142 * 10 9 8 13 13 N 1.31573 * 119.99730 * 341.85653 * 12 10 9 14 14 Si 1.86794 * 120.00063 * 161.85207 * 12 10 9 15 15 H 1.48506 * 109.47234 * 60.00404 * 14 12 10 16 16 H 1.48505 * 109.47125 * 180.02562 * 14 12 10 17 17 H 1.48499 * 109.47696 * 300.00240 * 14 12 10 18 18 C 1.46506 * 119.99461 * 184.99728 * 9 8 7 19 19 C 1.50702 * 109.47014 * 84.85836 * 18 9 8 20 20 C 1.38225 * 120.00053 * 264.82041 * 19 18 9 21 21 C 1.38242 * 119.99930 * 179.76741 * 20 19 18 22 22 C 1.38229 * 119.99983 * 0.50398 * 21 20 19 23 23 C 1.38239 * 120.00023 * 359.74982 * 22 21 20 24 24 C 1.38237 * 119.99529 * 85.09251 * 19 18 9 25 25 N 1.32274 * 119.62268 * 0.02668 * 3 2 1 26 26 H 1.09000 * 109.47023 * 179.97438 * 1 2 3 27 27 H 1.09003 * 109.46700 * 299.99609 * 1 2 3 28 28 H 1.08996 * 109.46646 * 59.99737 * 1 2 3 29 29 H 1.07997 * 120.37009 * 359.97438 * 4 3 2 30 30 H 1.08002 * 120.40347 * 179.97438 * 7 5 4 31 31 H 0.97004 * 119.99729 * 179.97438 * 13 12 10 32 32 H 1.09001 * 109.46997 * 204.85614 * 18 9 8 33 33 H 1.08994 * 109.47444 * 324.86026 * 18 9 8 34 34 H 1.08003 * 120.00196 * 359.97438 * 20 19 18 35 35 H 1.08000 * 120.00088 * 180.22902 * 21 20 19 36 36 H 1.08001 * 120.00402 * 179.72201 * 22 21 20 37 37 H 1.08004 * 119.99998 * 179.97438 * 23 22 21 38 38 H 1.07998 * 120.00493 * 0.02562 * 24 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2087 0.0000 4 6 3.4318 1.2723 0.0005 5 6 4.0540 2.5124 0.0000 6 17 5.7856 2.6360 0.0013 7 6 3.2625 3.6507 -0.0005 8 6 1.8789 3.5147 0.0053 9 7 1.0771 4.6481 0.0105 10 6 1.6454 5.8893 -0.0933 11 1 2.5566 6.1124 0.4419 12 6 1.0506 6.8610 -0.8863 13 7 0.1722 6.5150 -1.8027 14 14 1.4971 8.6596 -0.6523 15 1 2.9514 8.8436 -0.8899 16 1 0.7289 9.4896 -1.6147 17 1 1.1655 9.0757 0.7341 18 6 -0.3773 4.5158 0.1272 19 6 -0.7573 4.4127 1.5819 20 6 -0.9323 3.1714 2.1642 21 6 -1.2762 3.0768 3.4998 22 6 -1.4551 4.2237 4.2503 23 6 -1.2852 5.4652 3.6666 24 6 -0.9362 5.5597 2.3324 25 7 1.3174 2.3134 0.0005 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8901 28 1 -0.3632 0.5139 -0.8900 29 1 4.0199 0.3665 0.0014 30 1 3.7152 4.6313 -0.0005 31 1 -0.2437 7.1940 -2.3567 32 1 -0.8581 5.3895 -0.3129 33 1 -0.7038 3.6182 -0.3980 34 1 -0.7972 2.2753 1.5766 35 1 -1.4093 2.1068 3.9558 36 1 -1.7281 4.1499 5.2927 37 1 -1.4254 6.3613 4.2530 38 1 -0.8041 6.5297 1.8762 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166992206.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:35:02 Heat of formation + Delta-G solvation = 31.466522 kcal Electronic energy + Delta-G solvation = -24388.495711 eV Core-core repulsion = 20836.557546 eV Total energy + Delta-G solvation = -3551.938165 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -39.85938 -38.74245 -37.61819 -36.32833 -35.38234 -32.34368 -31.22388 -30.95946 -30.38621 -28.88580 -26.70005 -26.03602 -24.33292 -22.10146 -22.02444 -21.59429 -20.39674 -18.26164 -17.06345 -16.47600 -16.08458 -15.54294 -15.42149 -15.02526 -14.69586 -14.61622 -14.32210 -13.99506 -13.54354 -13.33423 -13.14821 -12.90810 -12.71174 -12.15459 -11.79196 -11.73872 -11.67826 -11.45513 -11.31338 -11.17707 -10.99523 -10.58659 -10.56311 -10.47513 -10.39840 -10.24181 -9.34828 -8.81422 -8.78541 -8.42492 -8.28136 -8.19247 -6.89817 -6.48653 -4.20744 1.82348 1.90166 2.04611 2.25421 2.51997 3.06109 3.10597 3.11753 3.75942 3.88357 4.23513 4.53762 4.65889 4.87320 5.33423 5.34869 5.46236 5.54541 5.57325 5.60222 5.78703 5.92353 5.95633 6.01280 6.03435 6.11758 6.20312 6.32921 6.50817 6.62343 6.72257 6.89306 6.93482 6.94831 7.00832 7.04071 7.24609 7.31332 7.52075 7.69708 8.00716 8.33022 8.74358 9.01059 9.54188 10.42844 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.008704 B = 0.006687 C = 0.004567 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3216.225302 B = 4186.106950 C = 6128.992956 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.044 3.956 2 O -0.314 6.314 3 C 0.377 3.623 4 C -0.301 4.301 5 C 0.079 3.921 6 Cl -0.080 7.080 7 C -0.259 4.259 8 C 0.426 3.574 9 N -0.402 5.402 10 C -0.319 4.319 11 H 0.091 0.909 12 C 0.045 3.955 13 N -0.854 5.854 14 Si 0.919 3.081 15 H -0.269 1.269 16 H -0.281 1.281 17 H -0.270 1.270 18 C 0.160 3.840 19 C -0.082 4.082 20 C -0.103 4.103 21 C -0.133 4.133 22 C -0.132 4.132 23 C -0.131 4.131 24 C -0.096 4.096 25 N -0.608 5.608 26 H 0.086 0.914 27 H 0.055 0.945 28 H 0.057 0.943 29 H 0.127 0.873 30 H 0.139 0.861 31 H 0.274 0.726 32 H 0.108 0.892 33 H 0.069 0.931 34 H 0.123 0.877 35 H 0.112 0.888 36 H 0.111 0.889 37 H 0.113 0.887 38 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.626 -4.984 5.551 7.635 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 O -0.222 6.222 3 C 0.194 3.806 4 C -0.327 4.327 5 C 0.046 3.954 6 Cl -0.052 7.052 7 C -0.285 4.285 8 C 0.186 3.814 9 N -0.091 5.091 10 C -0.448 4.448 11 H 0.109 0.891 12 C -0.163 4.163 13 N -0.488 5.488 14 Si 0.745 3.255 15 H -0.194 1.194 16 H -0.207 1.207 17 H -0.195 1.195 18 C 0.037 3.963 19 C -0.084 4.084 20 C -0.122 4.122 21 C -0.151 4.151 22 C -0.150 4.150 23 C -0.149 4.149 24 C -0.115 4.115 25 N -0.344 5.344 26 H 0.104 0.896 27 H 0.073 0.927 28 H 0.075 0.925 29 H 0.145 0.855 30 H 0.157 0.843 31 H 0.084 0.916 32 H 0.126 0.874 33 H 0.087 0.913 34 H 0.141 0.859 35 H 0.130 0.870 36 H 0.129 0.871 37 H 0.131 0.869 38 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -2.570 -4.896 5.348 7.692 hybrid contribution 1.012 1.035 0.090 1.450 sum -1.558 -3.860 5.438 6.849 Atomic orbital electron populations 1.22756 0.78283 1.01778 1.02380 1.86169 1.22089 1.25499 1.88409 1.18999 0.88023 0.83756 0.89840 1.19911 0.91714 0.96805 1.24269 1.20367 0.83140 0.93922 0.97980 1.98318 1.11530 1.98506 1.96806 1.20950 0.92491 0.98306 1.16781 1.18102 0.87529 0.85346 0.90450 1.42265 1.03237 1.01453 1.62123 1.19327 1.11881 0.86120 1.27456 0.89107 1.25477 0.96786 1.00762 0.93253 1.69989 1.27168 1.34845 1.16781 0.86102 0.79256 0.81585 0.78556 1.19367 1.20654 1.19488 1.20386 0.82472 1.03950 0.89541 1.20635 0.96912 0.92674 0.98133 1.21252 0.98427 0.97797 0.94677 1.21050 1.01602 0.97860 0.94609 1.20980 1.01999 0.92895 0.99163 1.21067 1.01367 0.97141 0.95336 1.21139 0.97886 0.98766 0.93695 1.66676 1.39968 0.97473 1.30333 0.89574 0.92683 0.92451 0.85534 0.84336 0.91604 0.87445 0.91297 0.85909 0.87024 0.87078 0.86867 0.86097 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.62 10.38 101.05 1.05 1.67 16 2 O -0.31 -5.52 10.47 -18.70 -0.20 -5.72 16 3 C 0.38 7.48 7.48 -17.14 -0.13 7.36 16 4 C -0.30 -5.78 9.86 -39.18 -0.39 -6.16 16 5 C 0.08 1.56 6.36 -39.24 -0.25 1.31 16 6 Cl -0.08 -1.35 29.02 -51.86 -1.50 -2.85 16 7 C -0.26 -5.62 9.12 -39.14 -0.36 -5.97 16 8 C 0.43 9.71 7.31 -155.05 -1.13 8.57 16 9 N -0.40 -9.37 2.59 -116.36 -0.30 -9.67 16 10 C -0.32 -7.67 8.44 -15.07 -0.13 -7.79 16 11 H 0.09 2.16 6.78 -52.49 -0.36 1.81 16 12 C 0.04 1.06 4.95 -17.45 -0.09 0.97 16 13 N -0.85 -21.12 11.59 55.49 0.64 -20.48 16 14 Si 0.92 18.53 29.59 -169.99 -5.03 13.50 16 15 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 16 H -0.28 -5.67 7.11 56.52 0.40 -5.27 16 17 H -0.27 -5.35 7.11 56.52 0.40 -4.95 16 18 C 0.16 3.48 5.06 -5.19 -0.03 3.45 16 19 C -0.08 -1.60 5.44 -104.63 -0.57 -2.17 16 20 C -0.10 -1.84 9.62 -39.58 -0.38 -2.22 16 21 C -0.13 -2.09 10.05 -39.58 -0.40 -2.48 16 22 C -0.13 -1.98 10.05 -39.58 -0.40 -2.38 16 23 C -0.13 -2.09 10.05 -39.58 -0.40 -2.49 16 24 C -0.10 -1.78 9.72 -39.58 -0.38 -2.16 16 25 N -0.61 -12.86 7.47 -12.52 -0.09 -12.96 16 26 H 0.09 0.92 8.14 -51.93 -0.42 0.50 16 27 H 0.05 0.78 6.37 -51.93 -0.33 0.45 16 28 H 0.06 0.85 8.10 -51.93 -0.42 0.43 16 29 H 0.13 2.19 8.06 -52.49 -0.42 1.77 16 30 H 0.14 3.03 6.40 -52.49 -0.34 2.70 16 31 H 0.27 6.43 8.31 -40.82 -0.34 6.09 16 32 H 0.11 2.50 5.70 -51.93 -0.30 2.20 16 33 H 0.07 1.51 7.37 -51.93 -0.38 1.13 16 34 H 0.12 2.16 5.84 -52.48 -0.31 1.85 16 35 H 0.11 1.47 8.06 -52.49 -0.42 1.05 16 36 H 0.11 1.35 8.06 -52.49 -0.42 0.93 16 37 H 0.11 1.53 8.06 -52.48 -0.42 1.10 16 38 H 0.12 2.28 8.06 -52.49 -0.42 1.86 16 LS Contribution 339.26 15.07 5.11 5.11 Total: -1.00 -25.51 339.26 -9.44 -34.96 By element: Atomic # 1 Polarization: 12.72 SS G_CDS: -4.10 Total: 8.62 kcal Atomic # 6 Polarization: -6.54 SS G_CDS: -3.97 Total: -10.51 kcal Atomic # 7 Polarization: -43.36 SS G_CDS: 0.25 Total: -43.11 kcal Atomic # 8 Polarization: -5.52 SS G_CDS: -0.20 Total: -5.72 kcal Atomic # 14 Polarization: 18.53 SS G_CDS: -5.03 Total: 13.50 kcal Atomic # 17 Polarization: -1.35 SS G_CDS: -1.50 Total: -2.85 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -25.51 -9.44 -34.96 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166992206.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.423 kcal (2) G-P(sol) polarization free energy of solvation -25.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.957 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds