Wall clock time and date at job start Tue Mar 31 2020 12:35:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35790 * 116.99735 * 2 1 4 4 C 1.38987 * 120.87646 * 0.25404 * 3 2 1 5 5 C 1.38253 * 119.17761 * 180.25120 * 4 3 2 6 6 Cl 1.73605 * 119.50821 * 179.71984 * 5 4 3 7 7 N 1.32052 * 120.98120 * 359.73715 * 5 4 3 8 8 C 1.31911 * 121.91965 * 0.02562 * 7 5 4 9 9 C 1.38783 * 120.71093 * 359.97438 * 8 7 5 10 10 N 1.39481 * 120.52324 * 179.97438 * 9 8 7 11 11 C 1.36799 * 120.00251 * 90.00169 * 10 9 8 12 12 H 1.07996 * 119.99909 * 50.20886 * 11 10 9 13 13 C 1.38769 * 119.99953 * 230.21394 * 11 10 9 14 14 N 1.31614 * 119.99615 * 202.84943 * 13 11 10 15 15 Si 1.86795 * 120.00251 * 23.12232 * 13 11 10 16 16 H 1.48496 * 109.47309 * 174.02828 * 15 13 11 17 17 H 1.48500 * 109.46950 * 294.02998 * 15 13 11 18 18 H 1.48501 * 109.47150 * 54.02574 * 15 13 11 19 19 C 1.46506 * 120.00005 * 270.00144 * 10 9 8 20 20 C 1.50706 * 109.46978 * 276.06630 * 19 10 9 21 21 C 1.38233 * 119.99900 * 275.26207 * 20 19 10 22 22 C 1.38233 * 119.99959 * 179.76721 * 21 20 19 23 23 C 1.38239 * 119.99824 * 0.50478 * 22 21 20 24 24 C 1.38231 * 120.00108 * 359.74797 * 23 22 21 25 25 C 1.38226 * 119.99895 * 95.53617 * 20 19 10 26 26 H 1.08994 * 109.46942 * 300.00228 * 1 2 3 27 27 H 1.08996 * 109.46686 * 60.00110 * 1 2 3 28 28 H 1.08995 * 109.46945 * 179.97438 * 1 2 3 29 29 H 1.08004 * 120.40942 * 359.96256 * 4 3 2 30 30 H 1.08006 * 119.64939 * 179.97438 * 8 7 5 31 31 H 0.96999 * 120.00910 * 0.27051 * 14 13 11 32 32 H 1.08999 * 109.46986 * 36.06586 * 19 10 9 33 33 H 1.08995 * 109.47130 * 156.06819 * 19 10 9 34 34 H 1.08004 * 119.99942 * 359.97438 * 21 20 19 35 35 H 1.08008 * 120.00224 * 180.23320 * 22 21 20 36 36 H 1.08001 * 119.99721 * 179.72344 * 23 22 21 37 37 H 1.07993 * 120.00223 * 179.97438 * 24 23 22 38 38 H 1.08003 * 120.00372 * 359.97438 * 25 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0455 1.2099 0.0000 4 6 1.3064 2.3870 0.0053 5 6 1.9702 3.5997 -0.0002 6 17 1.0554 5.0752 -0.0010 7 7 3.2896 3.6524 -0.0051 8 6 4.0312 2.5614 -0.0056 9 6 3.4428 1.3045 -0.0003 10 7 4.2307 0.1535 -0.0013 11 6 4.6223 -0.4084 1.1829 12 1 3.8924 -0.6078 1.9534 13 6 5.9575 -0.7222 1.3939 14 7 6.2862 -1.6355 2.2828 15 14 7.2886 0.1571 0.4221 16 1 8.6232 -0.2495 0.9307 17 1 7.1744 -0.2053 -1.0134 18 1 7.1262 1.6251 0.5764 19 6 4.6389 -0.4536 -1.2706 20 6 3.5392 -1.3528 -1.7740 21 6 3.4526 -2.6571 -1.3243 22 6 2.4411 -3.4803 -1.7823 23 6 1.5222 -3.0025 -2.6980 24 6 1.6119 -1.6998 -3.1516 25 6 2.6205 -0.8749 -2.6895 26 1 -0.3633 0.5138 0.8899 27 1 -0.3632 0.5138 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 0.2268 2.3546 0.0089 30 1 5.1078 2.6472 -0.0101 31 1 5.5952 -2.0921 2.7875 32 1 4.8312 0.3303 -2.0031 33 1 5.5457 -1.0390 -1.1184 34 1 4.1734 -3.0319 -0.6126 35 1 2.3712 -4.4983 -1.4282 36 1 0.7345 -3.6471 -3.0592 37 1 0.8943 -1.3266 -3.8672 38 1 2.6904 0.1429 -3.0439 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166992297.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:35:27 Heat of formation + Delta-G solvation = 43.510911 kcal Electronic energy + Delta-G solvation = -24880.534407 eV Core-core repulsion = 21329.118526 eV Total energy + Delta-G solvation = -3551.415881 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -40.29267 -38.66912 -37.84754 -36.51839 -35.75892 -32.19498 -31.35602 -30.92515 -30.36218 -28.98644 -27.23337 -25.59614 -23.92135 -22.61897 -21.99190 -21.42925 -20.52169 -18.19435 -17.77089 -16.85547 -16.36444 -15.64551 -15.54588 -15.06835 -14.70866 -14.63098 -14.33315 -14.04487 -13.83967 -13.74362 -13.39214 -13.05364 -12.90768 -12.33374 -12.25216 -11.97651 -11.61436 -11.50438 -11.22050 -11.05248 -11.02936 -10.75412 -10.58930 -10.29212 -9.94060 -9.54425 -9.41310 -8.77138 -8.64709 -8.39166 -8.30724 -7.94961 -7.28886 -6.45102 -3.85363 1.34193 1.69195 1.90157 1.94352 2.07517 3.29717 3.38631 3.51636 3.56529 4.06852 4.26811 4.39599 4.75255 4.87006 5.10392 5.13361 5.24912 5.27395 5.32241 5.36439 5.47166 5.53087 5.59522 5.66762 5.74606 5.93314 6.02838 6.03765 6.17583 6.26540 6.51088 6.57946 6.64573 6.82071 6.94082 7.01958 7.31370 7.53782 7.56914 8.07338 8.16200 8.40069 8.77489 9.33396 9.92390 10.78985 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.010132 B = 0.007001 C = 0.004758 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2762.821742 B = 3998.549694 C = 5883.774366 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.271 6.271 3 C 0.157 3.843 4 C -0.246 4.246 5 C 0.185 3.815 6 Cl -0.053 7.053 7 N -0.498 5.498 8 C 0.120 3.880 9 C 0.139 3.861 10 N -0.537 5.537 11 C -0.355 4.355 12 H 0.057 0.943 13 C 0.018 3.982 14 N -0.888 5.888 15 Si 1.042 2.958 16 H -0.289 1.289 17 H -0.278 1.278 18 H -0.282 1.282 19 C 0.164 3.836 20 C -0.070 4.070 21 C -0.088 4.088 22 C -0.126 4.126 23 C -0.137 4.137 24 C -0.128 4.128 25 C -0.111 4.111 26 H 0.050 0.950 27 H 0.051 0.949 28 H 0.096 0.904 29 H 0.137 0.863 30 H 0.166 0.834 31 H 0.270 0.730 32 H 0.046 0.954 33 H 0.082 0.918 34 H 0.122 0.878 35 H 0.111 0.889 36 H 0.108 0.892 37 H 0.107 0.893 38 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.331 2.793 -8.493 13.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.180 6.180 3 C 0.100 3.900 4 C -0.269 4.269 5 C 0.019 3.981 6 Cl -0.025 7.025 7 N -0.213 5.213 8 C -0.036 4.036 9 C 0.041 3.959 10 N -0.254 5.254 11 C -0.482 4.482 12 H 0.075 0.925 13 C -0.189 4.189 14 N -0.521 5.521 15 Si 0.871 3.129 16 H -0.216 1.216 17 H -0.205 1.205 18 H -0.208 1.208 19 C 0.041 3.959 20 C -0.073 4.073 21 C -0.107 4.107 22 C -0.144 4.144 23 C -0.155 4.155 24 C -0.147 4.147 25 C -0.130 4.130 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.115 0.885 29 H 0.154 0.846 30 H 0.183 0.817 31 H 0.081 0.919 32 H 0.065 0.935 33 H 0.100 0.900 34 H 0.140 0.860 35 H 0.129 0.871 36 H 0.126 0.874 37 H 0.125 0.875 38 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -8.226 3.536 -8.643 12.445 hybrid contribution -2.737 -0.604 0.446 2.838 sum -10.963 2.932 -8.198 14.000 Atomic orbital electron populations 1.23042 0.79789 1.03660 1.00652 1.86386 1.19810 1.24831 1.86971 1.20311 0.93045 0.84068 0.92535 1.21678 1.01057 0.90983 1.13220 1.21024 0.89735 0.86032 1.01290 1.98353 1.71358 1.35980 1.96812 1.66909 1.04928 1.33422 1.16011 1.23231 0.99892 0.85706 0.94769 1.18325 0.87463 0.90395 0.99670 1.41297 1.58605 1.22752 1.02791 1.19895 0.93076 1.41179 0.94061 0.92522 1.26566 0.97752 0.96247 0.98342 1.70930 1.37132 1.19889 1.24185 0.84122 0.76277 0.76747 0.75799 1.21563 1.20529 1.20787 1.20689 0.94418 0.93883 0.86926 1.20730 0.97959 0.94680 0.93927 1.21067 0.97989 0.93522 0.98106 1.21052 0.95770 0.99400 0.98172 1.20891 0.99521 0.95844 0.99256 1.20894 0.98613 0.94405 1.00750 1.20881 0.95437 0.98678 0.97993 0.93106 0.93077 0.88538 0.84550 0.81711 0.91914 0.93531 0.90021 0.86046 0.87123 0.87394 0.87464 0.87681 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.31 9.84 101.05 0.99 1.31 16 2 O -0.27 -4.89 8.94 -19.08 -0.17 -5.06 16 3 C 0.16 2.92 6.76 -38.62 -0.26 2.66 16 4 C -0.25 -4.01 8.87 -39.30 -0.35 -4.36 16 5 C 0.18 3.16 7.27 -17.45 -0.13 3.03 16 6 Cl -0.05 -0.77 29.10 -51.86 -1.51 -2.28 16 7 N -0.50 -9.40 10.33 -10.21 -0.11 -9.50 16 8 C 0.12 2.36 11.12 -17.32 -0.19 2.17 16 9 C 0.14 2.84 5.09 -83.50 -0.42 2.42 16 10 N -0.54 -11.85 1.63 -114.17 -0.19 -12.04 16 11 C -0.35 -9.13 9.59 -15.14 -0.15 -9.27 16 12 H 0.06 1.65 8.06 -52.49 -0.42 1.23 16 13 C 0.02 0.48 5.15 -17.45 -0.09 0.39 16 14 N -0.89 -25.07 13.71 55.49 0.76 -24.30 16 15 Si 1.04 23.39 26.94 -169.99 -4.58 18.81 16 16 H -0.29 -6.73 7.11 56.52 0.40 -6.32 16 17 H -0.28 -5.69 5.89 56.52 0.33 -5.36 16 18 H -0.28 -6.03 6.87 56.52 0.39 -5.64 16 19 C 0.16 3.31 4.36 -5.19 -0.02 3.29 16 20 C -0.07 -1.31 4.76 -104.63 -0.50 -1.81 16 21 C -0.09 -1.64 9.72 -39.59 -0.38 -2.02 16 22 C -0.13 -2.00 10.05 -39.58 -0.40 -2.40 16 23 C -0.14 -1.96 10.05 -39.58 -0.40 -2.36 16 24 C -0.13 -1.87 10.05 -39.58 -0.40 -2.27 16 25 C -0.11 -1.83 9.00 -39.58 -0.36 -2.19 16 26 H 0.05 0.60 7.70 -51.93 -0.40 0.20 16 27 H 0.05 0.58 7.72 -51.93 -0.40 0.18 16 28 H 0.10 1.13 8.14 -51.93 -0.42 0.71 16 29 H 0.14 1.84 6.46 -52.48 -0.34 1.50 16 30 H 0.17 3.16 7.82 -52.48 -0.41 2.75 16 31 H 0.27 7.66 8.73 -40.82 -0.36 7.30 16 32 H 0.05 0.86 8.00 -51.93 -0.42 0.44 16 33 H 0.08 1.74 4.97 -51.93 -0.26 1.49 16 34 H 0.12 2.45 8.06 -52.48 -0.42 2.03 16 35 H 0.11 1.54 8.06 -52.48 -0.42 1.12 16 36 H 0.11 1.27 8.06 -52.49 -0.42 0.84 16 37 H 0.11 1.30 8.06 -52.49 -0.42 0.88 16 38 H 0.11 1.66 8.06 -52.48 -0.42 1.24 16 LS Contribution 340.06 15.07 5.12 5.12 Total: -1.00 -27.94 340.06 -8.13 -36.07 By element: Atomic # 1 Polarization: 9.00 SS G_CDS: -4.42 Total: 4.58 kcal Atomic # 6 Polarization: -8.36 SS G_CDS: -3.05 Total: -11.40 kcal Atomic # 7 Polarization: -46.31 SS G_CDS: 0.47 Total: -45.84 kcal Atomic # 8 Polarization: -4.89 SS G_CDS: -0.17 Total: -5.06 kcal Atomic # 14 Polarization: 23.39 SS G_CDS: -4.58 Total: 18.81 kcal Atomic # 17 Polarization: -0.77 SS G_CDS: -1.51 Total: -2.28 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -27.94 -8.13 -36.07 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166992297.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.585 kcal (2) G-P(sol) polarization free energy of solvation -27.941 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.074 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds