Wall clock time and date at job start Tue Mar 31 2020 12:35:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35798 * 117.00568 * 2 1 4 4 C 1.39098 * 120.86551 * 359.97438 * 3 2 1 5 5 C 1.38051 * 119.21309 * 180.02562 * 4 3 2 6 6 N 1.32016 * 121.02360 * 0.02651 * 5 4 3 7 7 C 1.31959 * 121.91997 * 359.67311 * 6 5 4 8 8 Cl 1.73600 * 119.66946 * 180.29100 * 7 6 5 9 9 C 1.38986 * 120.66306 * 0.59141 * 7 6 5 10 10 N 1.39491 * 120.54044 * 179.72507 * 9 7 6 11 11 C 1.36790 * 119.99938 * 89.72230 * 10 9 7 12 12 H 1.07997 * 119.99813 * 18.23822 * 11 10 9 13 13 C 1.38769 * 120.00104 * 198.24726 * 11 10 9 14 14 N 1.31620 * 119.99444 * 312.51387 * 13 11 10 15 15 Si 1.86796 * 120.00305 * 132.51123 * 13 11 10 16 16 H 1.48499 * 109.47058 * 359.97438 * 15 13 11 17 17 H 1.48502 * 109.46977 * 120.00195 * 15 13 11 18 18 H 1.48497 * 109.47268 * 240.00051 * 15 13 11 19 19 C 1.46496 * 119.99786 * 269.72258 * 10 9 7 20 20 C 1.50703 * 109.47182 * 276.83258 * 19 10 9 21 21 C 1.38234 * 119.99779 * 84.55969 * 20 19 10 22 22 C 1.38238 * 120.00081 * 179.73043 * 21 20 19 23 23 C 1.38238 * 119.99560 * 0.26963 * 22 21 20 24 24 C 1.38234 * 120.00424 * 359.96109 * 23 22 21 25 25 C 1.38233 * 120.00037 * 264.77304 * 20 19 10 26 26 H 1.09005 * 109.46755 * 300.00015 * 1 2 3 27 27 H 1.08996 * 109.47491 * 60.00016 * 1 2 3 28 28 H 1.09004 * 109.47653 * 180.02562 * 1 2 3 29 29 H 1.07997 * 120.39162 * 0.04431 * 4 3 2 30 30 H 1.07994 * 119.48976 * 179.97438 * 5 4 3 31 31 H 0.97007 * 119.99673 * 179.97438 * 14 13 11 32 32 H 1.09002 * 109.46945 * 156.83869 * 19 10 9 33 33 H 1.08998 * 109.47640 * 36.83787 * 19 10 9 34 34 H 1.08003 * 120.00249 * 0.02562 * 21 20 19 35 35 H 1.08001 * 120.00133 * 180.25965 * 22 21 20 36 36 H 1.08000 * 119.99495 * 179.97438 * 23 22 21 37 37 H 1.07989 * 120.00011 * 179.97438 * 24 23 22 38 38 H 1.07995 * 120.00395 * 0.03637 * 25 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0456 1.2099 0.0000 4 6 1.3058 2.3879 -0.0005 5 6 1.9679 3.5993 -0.0011 6 7 3.2869 3.6537 -0.0016 7 6 4.0303 2.5635 0.0048 8 17 5.7606 2.7032 0.0113 9 6 3.4418 1.3043 0.0000 10 7 4.2301 0.1535 0.0009 11 6 4.6165 -0.4098 1.1860 12 1 4.0928 -0.1625 2.0976 13 6 5.6816 -1.2988 1.2171 14 7 5.7471 -2.2780 0.3400 15 14 7.0223 -1.1058 2.5033 16 1 6.7173 0.0650 3.3644 17 1 7.0870 -2.3318 3.3387 18 1 8.3288 -0.8967 1.8291 19 6 4.6440 -0.4518 -1.2673 20 6 3.5394 -1.3359 -1.7862 21 6 2.5072 -0.7900 -2.5261 22 6 1.4968 -1.6018 -3.0069 23 6 1.5158 -2.9586 -2.7429 24 6 2.5454 -3.5037 -1.9989 25 6 3.5560 -2.6919 -1.5185 26 1 -0.3633 0.5139 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3634 -1.0277 0.0005 29 1 0.2263 2.3551 -0.0002 30 1 1.3980 4.5166 -0.0019 31 1 6.4918 -2.8993 0.3614 32 1 5.5426 -1.0482 -1.1090 33 1 4.8525 0.3335 -1.9938 34 1 2.4926 0.2700 -2.7327 35 1 0.6926 -1.1759 -3.5885 36 1 0.7262 -3.5927 -3.1181 37 1 2.5599 -4.5636 -1.7923 38 1 4.3602 -3.1178 -0.9370 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166999558.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:35:30 Heat of formation + Delta-G solvation = 64.848590 kcal Electronic energy + Delta-G solvation = -25301.352421 eV Core-core repulsion = 21750.861811 eV Total energy + Delta-G solvation = -3550.490610 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -40.18563 -38.26959 -37.74116 -35.93438 -35.63313 -32.07417 -30.99004 -30.66434 -29.91027 -28.81587 -27.10811 -25.55639 -24.01313 -22.36624 -21.66446 -21.48994 -20.11130 -18.01156 -17.23234 -16.78335 -16.06957 -15.58023 -15.23293 -14.88454 -14.41274 -14.27343 -14.04039 -14.00614 -13.71783 -13.57438 -13.10847 -12.60798 -12.52876 -12.17005 -11.69823 -11.53542 -11.43565 -11.24428 -11.04139 -10.84400 -10.56964 -10.49343 -10.41376 -10.24831 -10.05752 -9.69069 -9.32112 -8.50735 -8.28449 -8.09999 -7.96916 -7.71342 -7.31916 -6.24323 -3.20710 1.42704 1.78232 2.27843 2.36804 2.50556 3.33639 3.48826 3.55695 3.68078 4.13001 4.33114 4.72797 4.86888 4.96997 5.13699 5.17656 5.34963 5.37156 5.42221 5.61568 5.68719 5.72162 5.81146 5.89163 6.09715 6.17343 6.34902 6.41845 6.51484 6.70107 6.72081 6.94264 7.06238 7.28924 7.44484 7.54990 7.65010 7.80864 7.86137 8.02838 8.20711 8.28713 8.95600 9.66304 10.08049 10.82420 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.009933 B = 0.008669 C = 0.005536 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2818.218694 B = 3229.169103 C = 5056.343201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.268 6.268 3 C 0.158 3.842 4 C -0.270 4.270 5 C 0.126 3.874 6 N -0.509 5.509 7 C 0.187 3.813 8 Cl -0.022 7.022 9 C 0.149 3.851 10 N -0.525 5.525 11 C -0.272 4.272 12 H 0.080 0.920 13 C 0.048 3.952 14 N -0.847 5.847 15 Si 0.849 3.151 16 H -0.274 1.274 17 H -0.293 1.293 18 H -0.284 1.284 19 C 0.166 3.834 20 C -0.064 4.064 21 C -0.112 4.112 22 C -0.141 4.141 23 C -0.141 4.141 24 C -0.142 4.142 25 C -0.081 4.081 26 H 0.049 0.951 27 H 0.049 0.951 28 H 0.096 0.904 29 H 0.133 0.867 30 H 0.155 0.845 31 H 0.261 0.739 32 H 0.127 0.873 33 H 0.023 0.977 34 H 0.094 0.906 35 H 0.099 0.901 36 H 0.100 0.900 37 H 0.104 0.896 38 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.767 3.853 -4.205 10.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.176 6.176 3 C 0.100 3.900 4 C -0.292 4.292 5 C -0.032 4.032 6 N -0.225 5.225 7 C 0.023 3.977 8 Cl 0.006 6.994 9 C 0.048 3.952 10 N -0.239 5.239 11 C -0.397 4.397 12 H 0.098 0.902 13 C -0.152 4.152 14 N -0.487 5.487 15 Si 0.675 3.325 16 H -0.199 1.199 17 H -0.221 1.221 18 H -0.210 1.210 19 C 0.043 3.957 20 C -0.067 4.067 21 C -0.131 4.131 22 C -0.159 4.159 23 C -0.160 4.160 24 C -0.160 4.160 25 C -0.100 4.100 26 H 0.067 0.933 27 H 0.068 0.932 28 H 0.114 0.886 29 H 0.150 0.850 30 H 0.173 0.827 31 H 0.071 0.929 32 H 0.145 0.855 33 H 0.042 0.958 34 H 0.112 0.888 35 H 0.117 0.883 36 H 0.118 0.882 37 H 0.122 0.878 38 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges -7.957 4.232 -4.224 9.953 hybrid contribution -0.309 -0.557 0.712 0.955 sum -8.266 3.675 -3.512 9.704 Atomic orbital electron populations 1.23019 0.79805 1.03646 1.00370 1.86414 1.19694 1.24843 1.86687 1.20481 0.92767 0.84731 0.91972 1.22205 1.01082 0.93174 1.12705 1.22113 0.88745 0.96758 0.95587 1.66962 1.06963 1.31714 1.16864 1.22659 0.87509 0.88888 0.98653 1.98373 1.06665 1.98155 1.96178 1.17377 0.87149 0.89122 1.01553 1.41462 1.56614 1.22460 1.03389 1.18823 1.10462 1.25498 0.84888 0.90219 1.24709 0.98484 0.95299 0.96755 1.70039 1.29324 1.10508 1.38788 0.87062 0.84533 0.78359 0.82502 1.19883 1.22090 1.20988 1.20965 0.97040 0.93233 0.84444 1.20779 0.96971 0.95198 0.93705 1.20858 0.95190 0.97931 0.99097 1.20748 0.98868 0.94046 1.02267 1.20830 0.98894 0.94967 1.01307 1.21147 0.95870 0.99112 0.99902 1.22046 0.98719 0.93505 0.95689 0.93276 0.93207 0.88563 0.84961 0.82749 0.92865 0.85524 0.95843 0.88818 0.88305 0.88160 0.87804 0.81871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 26. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.36 9.84 101.05 0.99 1.36 16 2 O -0.27 -5.01 8.23 -19.11 -0.16 -5.16 16 3 C 0.16 2.96 6.27 -38.62 -0.24 2.72 16 4 C -0.27 -4.10 9.11 -39.33 -0.36 -4.45 16 5 C 0.13 1.91 11.17 -17.54 -0.20 1.71 16 6 N -0.51 -9.41 10.33 -10.22 -0.11 -9.51 16 7 C 0.19 3.82 7.30 -17.22 -0.13 3.69 16 8 Cl -0.02 -0.45 28.60 -51.86 -1.48 -1.93 16 9 C 0.15 3.15 5.08 -83.46 -0.42 2.73 16 10 N -0.52 -12.11 1.77 -114.15 -0.20 -12.31 16 11 C -0.27 -6.90 9.50 -15.14 -0.14 -7.04 16 12 H 0.08 2.13 8.06 -52.49 -0.42 1.71 16 13 C 0.05 1.21 4.84 -17.45 -0.08 1.13 16 14 N -0.85 -20.91 8.11 55.49 0.45 -20.46 16 15 Si 0.85 19.94 29.69 -169.99 -5.05 14.89 16 16 H -0.27 -6.59 7.11 56.52 0.40 -6.18 16 17 H -0.29 -6.99 7.11 56.52 0.40 -6.59 16 18 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 19 C 0.17 3.75 5.31 -5.19 -0.03 3.72 16 20 C -0.06 -1.36 4.97 -104.62 -0.52 -1.88 16 21 C -0.11 -2.14 7.64 -39.58 -0.30 -2.44 16 22 C -0.14 -2.41 10.05 -39.58 -0.40 -2.80 16 23 C -0.14 -2.39 10.05 -39.58 -0.40 -2.79 16 24 C -0.14 -2.64 10.05 -39.58 -0.40 -3.04 16 25 C -0.08 -1.73 9.47 -39.58 -0.37 -2.11 16 26 H 0.05 0.57 7.71 -51.93 -0.40 0.17 16 27 H 0.05 0.58 7.71 -51.93 -0.40 0.18 16 28 H 0.10 1.20 8.14 -51.93 -0.42 0.78 16 29 H 0.13 1.57 6.46 -52.49 -0.34 1.23 16 30 H 0.16 1.73 8.06 -52.49 -0.42 1.30 16 31 H 0.26 6.21 8.31 -40.82 -0.34 5.87 16 32 H 0.13 3.10 4.90 -51.93 -0.25 2.84 16 33 H 0.02 0.51 8.08 -51.93 -0.42 0.09 16 34 H 0.09 1.77 8.06 -52.48 -0.42 1.35 16 35 H 0.10 1.44 8.06 -52.49 -0.42 1.02 16 36 H 0.10 1.43 8.06 -52.49 -0.42 1.00 16 37 H 0.10 1.73 8.06 -52.49 -0.42 1.30 16 38 H 0.16 3.77 5.30 -52.49 -0.28 3.50 16 LS Contribution 333.65 15.07 5.03 5.03 Total: -1.00 -27.01 333.65 -8.70 -35.71 By element: Atomic # 1 Polarization: 7.42 SS G_CDS: -4.19 Total: 3.24 kcal Atomic # 6 Polarization: -6.49 SS G_CDS: -3.00 Total: -9.49 kcal Atomic # 7 Polarization: -42.42 SS G_CDS: 0.14 Total: -42.28 kcal Atomic # 8 Polarization: -5.01 SS G_CDS: -0.16 Total: -5.16 kcal Atomic # 14 Polarization: 19.94 SS G_CDS: -5.05 Total: 14.89 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -1.48 Total: -1.93 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -27.01 -8.70 -35.71 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166999558.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.562 kcal (2) G-P(sol) polarization free energy of solvation -27.012 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.550 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.702 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.714 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds