Wall clock time and date at job start Tue Mar 31 2020 12:22:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.45202 * 109.46993 * 2 1 4 4 C 1.34234 * 116.99906 * 179.97438 * 3 2 1 5 5 O 1.20822 * 119.99796 * 359.97438 * 4 3 2 6 6 C 1.50702 * 119.99879 * 179.97438 * 4 3 2 7 7 F 1.39902 * 109.46937 * 85.41635 * 6 4 3 8 8 F 1.39899 * 109.47182 * 325.41796 * 6 4 3 9 9 C 1.52995 * 109.46851 * 205.41594 * 6 4 3 10 10 H 1.08996 * 109.47777 * 297.08924 * 9 6 4 11 11 O 1.42908 * 109.47398 * 57.09227 * 9 6 4 12 12 C 1.34928 * 116.99848 * 205.55801 * 11 9 6 13 13 H 1.07996 * 120.00176 * 5.02687 * 12 11 9 14 14 C 1.38636 * 119.99381 * 185.03643 * 12 11 9 15 15 N 1.31579 * 120.00544 * 359.97438 * 14 12 11 16 16 Si 1.86806 * 119.99540 * 179.97438 * 14 12 11 17 17 H 1.48497 * 109.47348 * 359.97438 * 16 14 12 18 18 H 1.48493 * 109.47065 * 119.99564 * 16 14 12 19 19 H 1.48504 * 109.46757 * 239.99304 * 16 14 12 20 20 C 1.50700 * 109.47204 * 177.08978 * 9 6 4 21 21 C 1.38249 * 119.97488 * 99.99787 * 20 9 6 22 22 C 1.38193 * 120.02703 * 180.02562 * 21 20 9 23 23 C 1.38465 * 119.97391 * 0.02562 * 22 21 20 24 24 F 1.35102 * 120.02560 * 179.97438 * 23 22 21 25 25 C 1.38452 * 119.94845 * 0.25066 * 23 22 21 26 26 C 1.38205 * 119.97464 * 359.47530 * 25 23 22 27 27 H 1.09001 * 109.47405 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47620 * 300.00532 * 1 2 3 29 29 H 1.09006 * 109.46964 * 60.00563 * 1 2 3 30 30 H 1.08993 * 109.47324 * 239.99482 * 2 1 3 31 31 H 1.09006 * 109.46964 * 119.99437 * 2 1 3 32 32 H 0.96995 * 120.00180 * 180.02562 * 15 14 12 33 33 H 1.08001 * 119.98353 * 0.02583 * 21 20 9 34 34 H 1.07998 * 120.01468 * 180.02562 * 22 21 20 35 35 H 1.08003 * 120.01637 * 179.74641 * 25 23 22 36 36 H 1.07997 * 119.98831 * 180.29848 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0015 6 6 3.9207 2.9375 0.0000 7 9 4.0009 3.4094 1.3146 8 9 3.0958 3.7830 -0.7495 9 6 5.3198 2.9104 -0.6184 10 1 5.9762 2.2928 -0.0054 11 8 5.2473 2.3648 -1.9373 12 6 6.3636 1.7815 -2.4211 13 1 7.2321 1.6700 -1.7889 14 6 6.3957 1.3253 -3.7299 15 7 5.3376 1.4609 -4.5001 16 14 7.9415 0.5183 -4.3999 17 1 8.9826 0.4876 -3.3415 18 1 7.6296 -0.8689 -4.8284 19 1 8.4410 1.2950 -5.5629 20 6 5.8672 4.3129 -0.6844 21 6 6.7645 4.7499 0.2721 22 6 7.2667 6.0360 0.2129 23 6 6.8703 6.8873 -0.8047 24 9 7.3602 8.1450 -0.8633 25 6 5.9672 6.4504 -1.7588 26 6 5.4707 5.1619 -1.7008 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 1.8933 -0.5139 -0.8899 31 1 1.8933 -0.5138 0.8901 32 1 5.3599 1.1414 -5.4156 33 1 7.0732 4.0859 1.0660 34 1 7.9680 6.3771 0.9600 35 1 5.6541 7.1148 -2.5507 36 1 4.7699 4.8194 -2.4478 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001224383492.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:22:17 Heat of formation + Delta-G solvation = -226.597364 kcal Electronic energy + Delta-G solvation = -27595.192181 eV Core-core repulsion = 23017.204870 eV Total energy + Delta-G solvation = -4577.987311 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 318.091 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -48.95458 -48.66124 -46.92228 -40.21310 -38.94542 -36.88863 -36.18561 -32.40037 -31.72929 -30.95173 -30.70267 -28.72918 -25.26895 -24.28445 -22.91820 -22.67902 -21.39168 -20.50096 -18.52261 -18.22028 -17.37228 -17.31874 -17.04017 -16.40323 -16.02609 -15.90654 -15.64658 -15.33494 -14.55127 -14.36993 -14.09004 -13.94898 -13.79396 -13.62012 -13.27814 -13.17818 -12.96870 -12.88699 -12.82820 -12.56792 -12.20379 -11.92296 -11.87344 -11.60450 -11.54084 -11.09599 -11.05388 -10.68626 -10.43662 -10.35255 -10.25001 -10.00521 -9.48441 -8.75631 -8.33618 -8.19070 -6.10734 -3.77742 1.38342 1.59649 2.12922 2.34242 3.24300 3.27142 3.32030 3.72872 3.91077 4.04953 4.34817 4.51499 4.60882 4.82016 4.97540 5.00637 5.04983 5.12589 5.17436 5.32087 5.34868 5.57641 5.65325 5.66875 5.80587 5.90996 5.94897 5.98973 6.22760 6.30453 6.39842 6.43608 6.62983 6.93730 7.21119 7.35027 7.69727 8.24964 9.30500 9.77125 11.08294 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.009216 B = 0.006441 C = 0.004241 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3037.315076 B = 4346.215198 C = 6600.744420 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.059 3.941 3 O -0.345 6.345 4 C 0.444 3.556 5 O -0.446 6.446 6 C 0.328 3.672 7 F -0.175 7.175 8 F -0.167 7.167 9 C 0.110 3.890 10 H 0.092 0.908 11 O -0.257 6.257 12 C -0.362 4.362 13 H 0.071 0.929 14 C 0.032 3.968 15 N -0.882 5.882 16 Si 0.927 3.073 17 H -0.272 1.272 18 H -0.281 1.281 19 H -0.281 1.281 20 C -0.117 4.117 21 C -0.075 4.075 22 C -0.164 4.164 23 C 0.094 3.906 24 F -0.147 7.147 25 C -0.160 4.160 26 C -0.036 4.036 27 H 0.079 0.921 28 H 0.065 0.935 29 H 0.069 0.931 30 H 0.078 0.922 31 H 0.070 0.930 32 H 0.260 0.740 33 H 0.130 0.870 34 H 0.131 0.869 35 H 0.133 0.867 36 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.296 3.190 9.816 11.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.014 4.014 3 O -0.262 6.262 4 C 0.281 3.719 5 O -0.328 6.328 6 C 0.290 3.710 7 F -0.156 7.156 8 F -0.147 7.147 9 C 0.048 3.952 10 H 0.110 0.890 11 O -0.172 6.172 12 C -0.440 4.440 13 H 0.088 0.912 14 C -0.167 4.167 15 N -0.523 5.523 16 Si 0.754 3.246 17 H -0.197 1.197 18 H -0.207 1.207 19 H -0.207 1.207 20 C -0.118 4.118 21 C -0.093 4.093 22 C -0.183 4.183 23 C 0.075 3.925 24 F -0.125 7.125 25 C -0.179 4.179 26 C -0.054 4.054 27 H 0.098 0.902 28 H 0.084 0.916 29 H 0.088 0.912 30 H 0.096 0.904 31 H 0.089 0.911 32 H 0.070 0.930 33 H 0.148 0.852 34 H 0.149 0.851 35 H 0.151 0.849 36 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -4.318 2.893 9.539 10.864 hybrid contribution 1.012 -0.190 -0.252 1.060 sum -3.306 2.703 9.288 10.223 Atomic orbital electron populations 1.21799 0.92490 1.02869 1.03627 1.23133 0.95434 0.79754 1.03088 1.86528 1.23184 1.32999 1.83528 1.23536 0.81885 0.91736 0.74738 1.90750 1.60132 1.40837 1.41122 1.20781 0.91783 0.82566 0.75877 1.93062 1.96904 1.89196 1.36467 1.93086 1.73732 1.72140 1.75776 1.21224 0.88895 0.92424 0.92617 0.89034 1.85739 1.36213 1.73018 1.22231 1.20826 0.90899 1.36310 0.96002 0.91178 1.24933 0.98096 0.98621 0.95066 1.70021 1.27923 1.47009 1.07384 0.85859 0.80940 0.78765 0.79030 1.19694 1.20742 1.20709 1.20463 0.98847 0.96255 0.96216 1.20859 0.95605 0.94882 0.97940 1.20946 1.03508 0.94441 0.99368 1.17740 0.97334 0.79791 0.97655 1.91457 1.86604 1.38190 1.96294 1.21137 0.99313 0.97728 0.99723 1.21026 0.96993 0.90933 0.96454 0.90194 0.91601 0.91161 0.90379 0.91139 0.92977 0.85200 0.85086 0.84891 0.83728 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.54 10.29 37.16 0.38 -1.16 16 2 C 0.06 0.83 6.19 37.16 0.23 1.06 16 3 O -0.35 -6.10 10.05 -39.27 -0.39 -6.49 16 4 C 0.44 8.88 6.96 36.01 0.25 9.13 16 5 O -0.45 -9.76 15.72 -21.74 -0.34 -10.10 16 6 C 0.33 6.40 1.82 -27.88 -0.05 6.35 16 7 F -0.18 -3.02 16.82 2.25 0.04 -2.98 16 8 F -0.17 -3.33 15.70 2.25 0.04 -3.29 16 9 C 0.11 2.31 1.60 -27.89 -0.04 2.27 16 10 H 0.09 1.87 7.55 -51.93 -0.39 1.48 16 11 O -0.26 -6.75 8.11 -20.96 -0.17 -6.92 16 12 C -0.36 -9.97 9.71 30.88 0.30 -9.67 16 13 H 0.07 1.85 7.67 -52.49 -0.40 1.44 16 14 C 0.03 0.91 5.49 -17.51 -0.10 0.81 16 15 N -0.88 -26.20 13.67 55.48 0.76 -25.44 16 16 Si 0.93 21.51 29.55 -169.99 -5.02 16.49 16 17 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 18 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 19 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 20 C -0.12 -2.23 4.58 -104.62 -0.48 -2.71 16 21 C -0.07 -1.20 9.67 -39.59 -0.38 -1.59 16 22 C -0.16 -2.44 10.03 -39.51 -0.40 -2.84 16 23 C 0.09 1.50 7.30 -39.42 -0.29 1.21 16 24 F -0.15 -2.27 17.27 2.25 0.04 -2.23 16 25 C -0.16 -2.67 10.03 -39.51 -0.40 -3.06 16 26 C -0.04 -0.69 8.52 -39.59 -0.34 -1.03 16 27 H 0.08 0.63 8.14 -51.93 -0.42 0.20 16 28 H 0.06 0.62 8.14 -51.93 -0.42 0.19 16 29 H 0.07 0.74 8.14 -51.93 -0.42 0.32 16 30 H 0.08 1.17 8.13 -51.93 -0.42 0.75 16 31 H 0.07 0.89 8.13 -51.93 -0.42 0.47 16 32 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 33 H 0.13 1.77 8.04 -52.49 -0.42 1.35 16 34 H 0.13 1.58 8.06 -52.49 -0.42 1.16 16 35 H 0.13 1.92 8.06 -52.48 -0.42 1.50 16 36 H 0.14 2.99 7.64 -52.49 -0.40 2.59 16 LS Contribution 336.44 15.07 5.07 5.07 Total: -1.00 -31.53 336.44 -5.01 -36.54 By element: Atomic # 1 Polarization: 4.29 SS G_CDS: -3.71 Total: 0.58 kcal Atomic # 6 Polarization: 0.09 SS G_CDS: -1.31 Total: -1.22 kcal Atomic # 7 Polarization: -26.20 SS G_CDS: 0.76 Total: -25.44 kcal Atomic # 8 Polarization: -22.61 SS G_CDS: -0.91 Total: -23.51 kcal Atomic # 9 Polarization: -8.62 SS G_CDS: 0.11 Total: -8.51 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -5.02 Total: 16.49 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -31.53 -5.01 -36.54 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001224383492.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -190.056 kcal (2) G-P(sol) polarization free energy of solvation -31.533 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -221.589 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.008 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds