Wall clock time and date at job start Tue Mar 31 2020 11:54:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52995 * 109.47634 * 2 1 4 4 O 1.42900 * 109.47134 * 120.00185 * 2 1 3 5 5 C 1.35926 * 117.00138 * 84.81187 * 4 2 1 6 6 C 1.38375 * 119.98381 * 354.58044 * 5 4 2 7 7 C 1.39597 * 119.80514 * 179.97438 * 6 5 4 8 8 C 1.47903 * 120.10462 * 179.97438 * 7 6 5 9 9 C 1.40450 * 120.79275 * 180.02562 * 8 7 6 10 10 N 1.31578 * 119.09621 * 180.02562 * 9 8 7 11 11 C 1.33661 * 120.82742 * 359.97438 * 10 9 8 12 12 C 1.41063 * 119.12657 * 180.02562 * 11 10 9 13 13 H 1.08005 * 120.00380 * 359.97438 * 12 11 10 14 14 C 1.40138 * 119.99635 * 180.02562 * 12 11 10 15 15 N 1.30663 * 120.00209 * 0.02562 * 14 12 11 16 16 Si 1.86808 * 119.99788 * 180.27318 * 14 12 11 17 17 H 1.48499 * 109.46805 * 179.72332 * 16 14 12 18 18 H 1.48498 * 109.47052 * 299.72421 * 16 14 12 19 19 H 1.48496 * 109.46901 * 59.72713 * 16 14 12 20 20 N 1.33647 * 121.73702 * 0.27663 * 11 10 9 21 21 C 1.31585 * 120.83415 * 359.44020 * 20 11 10 22 22 C 1.39712 * 119.78391 * 0.25758 * 7 6 5 23 23 C 1.37906 * 119.96963 * 359.49049 * 22 7 6 24 24 C 1.38459 * 120.18955 * 0.51017 * 23 22 7 25 25 Cl 1.73598 * 119.88902 * 179.72114 * 24 23 22 26 26 H 1.09002 * 109.47039 * 59.99832 * 1 2 3 27 27 H 1.08995 * 109.47203 * 179.97438 * 1 2 3 28 28 H 1.08998 * 109.47129 * 299.99716 * 1 2 3 29 29 H 1.09004 * 109.47144 * 239.99836 * 2 1 3 30 30 H 1.08998 * 109.47438 * 179.97438 * 3 2 1 31 31 H 1.09002 * 109.47045 * 300.00164 * 3 2 1 32 32 H 1.09004 * 109.46988 * 59.99741 * 3 2 1 33 33 H 1.08000 * 120.09570 * 0.02562 * 6 5 4 34 34 H 1.08004 * 120.44880 * 0.03592 * 9 8 7 35 35 H 0.97002 * 120.00206 * 179.97438 * 15 14 12 36 36 H 1.07999 * 120.45749 * 180.27907 * 21 20 11 37 37 H 1.08006 * 120.01897 * 179.72288 * 22 7 6 38 38 H 1.07994 * 119.90685 * 180.23257 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 8 2.0063 -0.6737 1.1668 5 6 2.1088 -2.0274 1.0991 6 6 1.6541 -2.7002 -0.0213 7 6 1.7616 -4.0905 -0.0870 8 6 1.2772 -4.8164 -1.2811 9 6 1.3778 -6.2149 -1.3623 10 7 0.9366 -6.8266 -2.4405 11 6 0.3983 -6.1341 -3.4490 12 6 -0.0636 -6.8265 -4.5879 13 1 0.0204 -7.9022 -4.6369 14 6 -0.6307 -6.1186 -5.6561 15 7 -0.7310 -4.8171 -5.5974 16 14 -1.2494 -7.0362 -7.1610 17 1 -1.8059 -6.0661 -8.1381 18 1 -0.1248 -7.7779 -7.7856 19 1 -2.3096 -7.9938 -6.7557 20 7 0.2907 -4.8026 -3.4090 21 6 0.7053 -4.1237 -2.3608 22 6 2.3229 -4.7944 0.9814 23 6 2.7779 -4.1142 2.0914 24 6 2.6707 -2.7353 2.1554 25 17 3.2394 -1.8876 3.5595 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 1.8933 -0.5139 -0.8900 30 1 3.1301 1.4424 0.0005 31 1 1.6768 1.9563 -0.8900 32 1 1.6768 1.9563 0.8900 33 1 1.2180 -2.1513 -0.8428 34 1 1.8112 -6.7805 -0.5507 35 1 -1.1232 -4.3270 -6.3370 36 1 0.6113 -3.0481 -2.3330 37 1 2.4039 -5.8705 0.9364 38 1 3.2150 -4.6590 2.9150 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001236409281.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:54:35 Heat of formation + Delta-G solvation = 14.018939 kcal Electronic energy + Delta-G solvation = -23298.117547 eV Core-core repulsion = 19745.422798 eV Total energy + Delta-G solvation = -3552.694749 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -40.16569 -39.06082 -37.45350 -36.06641 -34.16912 -33.23449 -32.20504 -31.68327 -29.87014 -28.79166 -27.31767 -26.18207 -23.82236 -23.03145 -22.23677 -20.88736 -20.49571 -18.17398 -17.98902 -16.40190 -16.27001 -15.55797 -15.40759 -15.07799 -14.72788 -14.59013 -14.05221 -13.53416 -13.44361 -13.17127 -12.86871 -12.86465 -12.49995 -12.36252 -12.35071 -11.99078 -11.68886 -11.51262 -11.47953 -11.22398 -11.21325 -10.97874 -10.82522 -10.69208 -10.51102 -10.43192 -9.73826 -9.39337 -9.35923 -8.92746 -8.15002 -7.55190 -7.41892 -6.82714 -4.96230 1.23200 1.67476 2.52067 2.53941 2.81631 2.89732 2.92480 2.98085 3.25272 3.66655 4.04300 4.48122 4.74045 4.86498 4.99456 5.08258 5.26710 5.34415 5.46976 5.50298 5.56653 5.65860 5.69167 5.70087 5.72326 5.77167 5.87791 5.99676 6.04243 6.13449 6.14835 6.40524 6.50802 6.57523 6.72035 6.88197 6.97325 7.26141 7.40008 7.55761 7.86910 8.19693 8.27928 8.85147 9.81309 10.00500 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.018601 B = 0.003275 C = 0.002822 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1504.958920 B = 8546.496821 C = 9918.667123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.075 3.925 3 C -0.146 4.146 4 O -0.304 6.304 5 C 0.155 3.845 6 C -0.230 4.230 7 C 0.085 3.915 8 C -0.339 4.339 9 C 0.196 3.804 10 N -0.592 5.592 11 C 0.377 3.623 12 C -0.367 4.367 13 H 0.099 0.901 14 C 0.058 3.942 15 N -0.691 5.691 16 Si 0.925 3.075 17 H -0.273 1.273 18 H -0.260 1.260 19 H -0.260 1.260 20 N -0.508 5.508 21 C 0.187 3.813 22 C -0.174 4.174 23 C -0.060 4.060 24 C -0.110 4.110 25 Cl -0.082 7.082 26 H 0.071 0.929 27 H 0.067 0.933 28 H 0.065 0.935 29 H 0.076 0.924 30 H 0.063 0.937 31 H 0.075 0.925 32 H 0.065 0.935 33 H 0.134 0.866 34 H 0.135 0.865 35 H 0.282 0.718 36 H 0.129 0.871 37 H 0.128 0.872 38 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.940 7.915 7.767 11.472 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.019 3.981 3 C -0.203 4.203 4 O -0.218 6.218 5 C 0.109 3.891 6 C -0.249 4.249 7 C 0.083 3.917 8 C -0.350 4.350 9 C 0.020 3.980 10 N -0.310 5.310 11 C 0.146 3.854 12 C -0.399 4.399 13 H 0.117 0.883 14 C -0.171 4.171 15 N -0.311 5.311 16 Si 0.747 3.253 17 H -0.198 1.198 18 H -0.184 1.184 19 H -0.184 1.184 20 N -0.223 5.223 21 C 0.009 3.991 22 C -0.193 4.193 23 C -0.078 4.078 24 C -0.137 4.137 25 Cl -0.054 7.054 26 H 0.090 0.910 27 H 0.086 0.914 28 H 0.084 0.916 29 H 0.094 0.906 30 H 0.083 0.917 31 H 0.094 0.906 32 H 0.084 0.916 33 H 0.152 0.848 34 H 0.152 0.848 35 H 0.093 0.907 36 H 0.146 0.854 37 H 0.146 0.854 38 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.535 7.741 6.889 10.668 hybrid contribution 0.015 0.278 0.162 0.323 sum 2.550 8.019 7.051 10.979 Atomic orbital electron populations 1.22387 0.94986 1.03551 1.02895 1.22444 0.94463 0.93535 0.87665 1.21830 1.02014 0.93634 1.02833 1.86149 1.81001 1.15984 1.38634 1.18464 0.94795 0.82712 0.93135 1.21192 1.10020 0.94928 0.98780 1.18560 0.89861 0.91364 0.91958 1.19688 1.20880 0.95598 0.98785 1.22726 0.90546 0.90483 0.94284 1.68674 1.18877 1.40580 1.02843 1.19958 0.88616 0.85904 0.90960 1.19567 1.28199 0.95623 0.96498 0.88345 1.26272 0.95064 0.95144 1.00647 1.70102 1.24058 1.07411 1.29518 0.86083 0.80074 0.79941 0.79178 1.19785 1.18414 1.18404 1.69350 1.20911 1.08467 1.23614 1.23015 0.88990 0.98828 0.88235 1.21003 1.04525 1.00021 0.93777 1.20664 0.98016 0.90848 0.98319 1.19949 1.11606 0.91905 0.90261 1.98306 1.88236 1.78342 1.40481 0.90980 0.91426 0.91637 0.90597 0.91748 0.90586 0.91632 0.84806 0.84783 0.90684 0.85363 0.85389 0.85197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.04 9.17 37.16 0.34 -1.70 16 2 C 0.08 0.91 2.85 -26.73 -0.08 0.83 16 3 C -0.15 -1.40 9.56 37.16 0.36 -1.05 16 4 O -0.30 -4.49 9.25 -19.51 -0.18 -4.67 16 5 C 0.16 2.48 6.59 -39.24 -0.26 2.22 16 6 C -0.23 -3.81 7.64 -39.02 -0.30 -4.11 16 7 C 0.08 1.52 5.88 -104.88 -0.62 0.91 16 8 C -0.34 -7.10 5.94 -104.27 -0.62 -7.72 16 9 C 0.20 4.24 10.70 -16.83 -0.18 4.06 16 10 N -0.59 -14.82 10.34 -12.41 -0.13 -14.95 16 11 C 0.38 10.02 7.35 -158.16 -1.16 8.86 16 12 C -0.37 -9.35 9.35 -37.80 -0.35 -9.70 16 13 H 0.10 2.38 7.85 -52.48 -0.41 1.97 16 14 C 0.06 1.36 5.50 -17.34 -0.10 1.26 16 15 N -0.69 -16.78 11.40 55.56 0.63 -16.15 16 16 Si 0.92 17.00 29.56 -169.99 -5.03 11.97 16 17 H -0.27 -4.84 7.11 56.52 0.40 -4.44 16 18 H -0.26 -4.73 7.11 56.52 0.40 -4.32 16 19 H -0.26 -4.73 7.11 56.52 0.40 -4.33 16 20 N -0.51 -13.18 7.83 -12.41 -0.10 -13.28 16 21 C 0.19 4.22 10.70 -16.82 -0.18 4.04 16 22 C -0.17 -2.75 9.45 -39.15 -0.37 -3.12 16 23 C -0.06 -0.87 9.81 -39.62 -0.39 -1.26 16 24 C -0.11 -1.70 6.34 -39.21 -0.25 -1.95 16 25 Cl -0.08 -1.17 28.49 -51.86 -1.48 -2.64 16 26 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 27 H 0.07 0.87 6.89 -51.93 -0.36 0.51 16 28 H 0.06 0.71 8.14 -51.93 -0.42 0.28 16 29 H 0.08 0.94 6.32 -51.93 -0.33 0.61 16 30 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 31 H 0.08 0.59 8.14 -51.93 -0.42 0.17 16 32 H 0.06 0.61 8.14 -51.93 -0.42 0.18 16 33 H 0.13 2.10 3.64 -52.49 -0.19 1.91 16 34 H 0.13 2.42 6.33 -52.48 -0.33 2.08 16 35 H 0.28 6.10 8.29 -40.82 -0.34 5.76 16 36 H 0.13 2.53 6.33 -52.49 -0.33 2.19 16 37 H 0.13 1.82 6.28 -52.48 -0.33 1.49 16 38 H 0.13 1.56 8.06 -52.49 -0.42 1.13 16 LS Contribution 335.69 15.07 5.06 5.06 Total: -1.00 -28.12 335.69 -9.32 -37.44 By element: Atomic # 1 Polarization: 9.62 SS G_CDS: -3.95 Total: 5.67 kcal Atomic # 6 Polarization: -4.29 SS G_CDS: -4.15 Total: -8.45 kcal Atomic # 7 Polarization: -44.78 SS G_CDS: 0.41 Total: -44.37 kcal Atomic # 8 Polarization: -4.49 SS G_CDS: -0.18 Total: -4.67 kcal Atomic # 14 Polarization: 17.00 SS G_CDS: -5.03 Total: 11.97 kcal Atomic # 17 Polarization: -1.17 SS G_CDS: -1.48 Total: -2.64 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -28.12 -9.32 -37.44 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001236409281.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.458 kcal (2) G-P(sol) polarization free energy of solvation -28.119 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.340 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.439 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.019 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds