Wall clock time and date at job start Tue Mar 31 2020 11:34:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 N 1.46489 * 109.47308 * 2 1 4 4 C 1.46505 * 120.00362 * 280.73190 * 3 2 1 5 5 C 1.50698 * 109.47207 * 270.00620 * 4 3 2 6 6 H 1.07994 * 120.00140 * 359.97438 * 5 4 3 7 7 C 1.37880 * 119.99595 * 179.97438 * 5 4 3 8 8 N 1.31507 * 120.00188 * 359.97438 * 7 5 4 9 9 Si 1.86804 * 119.99506 * 179.97438 * 7 5 4 10 10 H 1.48496 * 109.47179 * 359.97438 * 9 7 5 11 11 H 1.48501 * 109.47104 * 120.00121 * 9 7 5 12 12 H 1.48500 * 109.47117 * 239.99841 * 9 7 5 13 13 C 1.34782 * 120.00103 * 100.73724 * 3 2 1 14 14 O 1.21591 * 120.00166 * 187.07634 * 13 3 2 15 15 C 1.47522 * 119.99718 * 7.06959 * 13 3 2 16 16 C 1.39989 * 120.60033 * 328.29854 * 15 13 3 17 17 C 1.38331 * 118.34712 * 179.70975 * 16 15 13 18 18 C 1.38364 * 119.46035 * 0.52771 * 17 16 15 19 19 C 1.50690 * 119.40520 * 179.73041 * 18 17 16 20 20 F 1.39903 * 109.46854 * 184.73040 * 19 18 17 21 21 F 1.39902 * 109.47803 * 64.73149 * 19 18 17 22 22 F 1.39901 * 109.47753 * 304.72833 * 19 18 17 23 23 N 1.31878 * 121.18146 * 359.45379 * 18 17 16 24 24 C 1.32237 * 121.80460 * 0.27994 * 23 18 17 25 25 O 1.35421 * 119.79952 * 179.97438 * 24 23 18 26 26 H 1.08992 * 109.47339 * 180.02562 * 1 2 3 27 27 H 1.08999 * 109.46628 * 300.00252 * 1 2 3 28 28 H 1.09002 * 109.47056 * 59.99314 * 1 2 3 29 29 H 1.08999 * 109.46628 * 239.99748 * 2 1 3 30 30 H 1.08995 * 109.46751 * 120.00468 * 2 1 3 31 31 H 1.09008 * 109.46600 * 30.00440 * 4 3 2 32 32 H 1.08994 * 109.47071 * 149.99955 * 4 3 2 33 33 H 0.97007 * 119.99867 * 180.02562 * 8 7 5 34 34 H 1.07995 * 120.82364 * 359.97438 * 16 15 13 35 35 H 1.08000 * 120.26835 * 180.25844 * 17 16 15 36 36 H 0.96702 * 114.00393 * 90.00095 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3811 0.0000 4 6 2.0399 2.1506 -1.2465 5 6 3.3633 1.9489 -1.9386 6 1 4.1135 1.3118 -1.4942 7 6 3.6162 2.5780 -3.1392 8 7 2.7025 3.3535 -3.6806 9 14 5.2570 2.3286 -3.9967 10 1 6.1052 1.4176 -3.1870 11 1 5.0291 1.7324 -5.3375 12 1 5.9410 3.6380 -4.1470 13 6 2.4481 1.9440 1.1468 14 8 2.7317 3.1260 1.1749 15 6 2.5742 1.1259 2.3679 16 6 1.7106 0.0480 2.5958 17 6 1.8744 -0.6915 3.7534 18 6 2.8693 -0.3419 4.6492 19 6 3.0427 -1.1445 5.9127 20 9 4.0266 -0.5510 6.7108 21 9 3.4303 -2.4488 5.5873 22 9 1.8322 -1.1789 6.6132 23 7 3.6720 0.6778 4.4144 24 6 3.5621 1.4140 3.3214 25 8 4.4080 2.4524 3.1215 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3632 0.5139 0.8900 28 1 -0.3633 0.5140 -0.8899 29 1 1.8933 -0.5139 -0.8900 30 1 1.8933 -0.5139 0.8899 31 1 1.2340 1.8106 -1.8972 32 1 1.9043 3.2086 -1.0227 33 1 2.8803 3.7957 -4.5254 34 1 0.9385 -0.2027 1.8836 35 1 1.2281 -1.5321 3.9584 36 1 5.2153 2.2160 2.6445 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000270963075.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:34:04 Heat of formation + Delta-G solvation = -154.594555 kcal Electronic energy + Delta-G solvation = -27027.386096 eV Core-core repulsion = 22484.813813 eV Total energy + Delta-G solvation = -4542.572283 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 318.098 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -50.39782 -47.94307 -47.82421 -41.21498 -38.87412 -37.41631 -35.67194 -33.61319 -32.50654 -31.41861 -30.42342 -27.96330 -26.62418 -24.11374 -23.64968 -23.08783 -22.44215 -19.68550 -19.24031 -18.79910 -18.78893 -17.87663 -17.05354 -16.84069 -16.51446 -16.01179 -15.23089 -14.94534 -14.78811 -14.77550 -14.61910 -14.30584 -14.22832 -14.01106 -13.98334 -13.93198 -13.49683 -13.05323 -12.60810 -12.53889 -12.38489 -12.19532 -11.86115 -11.78248 -11.33637 -11.12681 -10.99066 -10.72047 -10.27056 -10.09992 -10.03082 -9.74722 -9.40543 -9.11668 -8.54729 -7.87738 -6.15852 -4.21730 0.12417 0.69876 2.11074 2.73107 3.08152 3.22347 3.30312 3.32329 3.40413 3.52330 3.64541 3.90054 4.10512 4.33565 4.36460 4.47576 4.56003 4.80557 5.04484 5.07146 5.19139 5.34431 5.36863 5.50783 5.55115 5.76274 5.88846 6.05155 6.31618 6.86502 7.17283 7.28018 7.34834 7.49626 7.79311 8.08547 8.14117 8.68736 8.85765 9.44007 10.92220 Molecular weight = 318.10amu Principal moments of inertia in cm(-1) A = 0.020596 B = 0.003537 C = 0.003340 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1359.149460 B = 7913.725236 C = 8380.097941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.074 3.926 3 N -0.584 5.584 4 C 0.246 3.754 5 C -0.532 4.532 6 H 0.058 0.942 7 C 0.063 3.937 8 N -0.891 5.891 9 Si 0.899 3.101 10 H -0.274 1.274 11 H -0.283 1.283 12 H -0.282 1.282 13 C 0.546 3.454 14 O -0.508 6.508 15 C -0.152 4.152 16 C -0.057 4.057 17 C -0.142 4.142 18 C 0.069 3.931 19 C 0.523 3.477 20 F -0.161 7.161 21 F -0.170 7.170 22 F -0.170 7.170 23 N -0.469 5.469 24 C 0.369 3.631 25 O -0.452 6.452 26 H 0.067 0.933 27 H 0.056 0.944 28 H 0.072 0.928 29 H 0.085 0.915 30 H 0.085 0.915 31 H 0.037 0.963 32 H 0.048 0.952 33 H 0.264 0.736 34 H 0.183 0.817 35 H 0.155 0.845 36 H 0.408 0.592 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.439 -12.817 14.496 19.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C -0.050 4.050 3 N -0.316 5.316 4 C 0.127 3.873 5 C -0.571 4.571 6 H 0.076 0.924 7 C -0.139 4.139 8 N -0.530 5.530 9 Si 0.726 3.274 10 H -0.198 1.198 11 H -0.209 1.209 12 H -0.208 1.208 13 C 0.330 3.670 14 O -0.383 6.383 15 C -0.159 4.159 16 C -0.082 4.082 17 C -0.163 4.163 18 C -0.071 4.071 19 C 0.467 3.533 20 F -0.142 7.142 21 F -0.151 7.151 22 F -0.151 7.151 23 N -0.188 5.188 24 C 0.188 3.812 25 O -0.259 6.259 26 H 0.086 0.914 27 H 0.075 0.925 28 H 0.091 0.909 29 H 0.103 0.897 30 H 0.103 0.897 31 H 0.055 0.945 32 H 0.066 0.934 33 H 0.074 0.926 34 H 0.199 0.801 35 H 0.173 0.827 36 H 0.268 0.732 Dipole moment (debyes) X Y Z Total from point charges -3.047 -11.464 15.185 19.269 hybrid contribution 0.717 -0.689 -1.179 1.542 sum -2.330 -12.153 14.006 18.690 Atomic orbital electron populations 1.22292 0.96121 1.02103 1.03153 1.22224 0.94110 0.84782 1.03853 1.48190 1.60663 1.13257 1.09484 1.19377 0.97416 0.92438 0.78063 1.21420 1.00636 1.29451 1.05576 0.92399 1.24926 0.97155 0.94762 0.97077 1.69932 1.33860 1.30275 1.18910 0.86437 0.83568 0.78117 0.79258 1.19826 1.20882 1.20768 1.17641 0.79891 0.87100 0.82330 1.90843 1.48710 1.14662 1.84133 1.21768 0.99028 0.97541 0.97595 1.22748 0.98334 0.91301 0.95828 1.21754 0.98311 1.02113 0.94105 1.20730 0.95827 0.95237 0.95295 1.17877 0.74412 0.77664 0.83317 1.93248 1.62260 1.83420 1.75254 1.93242 1.91025 1.38226 1.92632 1.93237 1.45122 1.96381 1.80400 1.66676 1.26305 1.04370 1.21491 1.18881 0.90481 0.85366 0.86496 1.84803 1.34448 1.27885 1.78740 0.91438 0.92538 0.90853 0.89689 0.89725 0.94534 0.93378 0.92603 0.80083 0.82721 0.73189 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.01 9.16 37.16 0.34 -1.67 16 2 C 0.07 1.03 5.60 -4.04 -0.02 1.01 16 3 N -0.58 -11.32 2.47 -176.30 -0.44 -11.75 16 4 C 0.25 5.99 5.20 -5.19 -0.03 5.96 16 5 C -0.53 -14.19 9.39 -34.44 -0.32 -14.51 16 6 H 0.06 1.53 7.81 -52.49 -0.41 1.12 16 7 C 0.06 1.73 5.46 -17.82 -0.10 1.63 16 8 N -0.89 -25.41 13.29 55.43 0.74 -24.67 16 9 Si 0.90 20.91 29.54 -169.99 -5.02 15.89 16 10 H -0.27 -6.25 7.11 56.52 0.40 -5.85 16 11 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 12 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 13 C 0.55 10.82 7.33 -12.47 -0.09 10.73 16 14 O -0.51 -12.29 15.39 -13.29 -0.20 -12.50 16 15 C -0.15 -2.37 5.58 -104.69 -0.58 -2.95 16 16 C -0.06 -0.65 7.58 -38.89 -0.29 -0.95 16 17 C -0.14 -1.41 9.57 -39.50 -0.38 -1.79 16 18 C 0.07 0.84 6.27 -82.53 -0.52 0.33 16 19 C 0.52 5.76 3.31 36.00 0.12 5.88 16 20 F -0.16 -2.01 16.84 2.25 0.04 -1.97 16 21 F -0.17 -1.75 17.28 2.25 0.04 -1.71 16 22 F -0.17 -1.74 17.16 2.25 0.04 -1.70 16 23 N -0.47 -6.90 9.73 -9.21 -0.09 -6.99 16 24 C 0.37 5.81 7.74 -16.61 -0.13 5.68 16 25 O -0.45 -7.31 12.12 -36.53 -0.44 -7.75 16 26 H 0.07 0.55 8.14 -51.93 -0.42 0.13 16 27 H 0.06 0.60 7.16 -51.93 -0.37 0.23 16 28 H 0.07 0.96 7.73 -51.93 -0.40 0.56 16 29 H 0.08 1.24 8.14 -51.93 -0.42 0.81 16 30 H 0.09 0.97 3.88 -52.13 -0.20 0.77 16 31 H 0.04 0.89 7.66 -51.92 -0.40 0.50 16 32 H 0.05 1.34 7.34 -51.93 -0.38 0.96 16 33 H 0.26 7.11 8.31 -40.82 -0.34 6.77 16 34 H 0.18 1.73 3.05 -52.49 -0.16 1.57 16 35 H 0.16 0.97 8.06 -52.49 -0.42 0.54 16 36 H 0.41 4.84 9.06 45.56 0.41 5.25 16 LS Contribution 323.66 15.07 4.88 4.88 Total: -1.00 -33.04 323.66 -4.78 -37.82 By element: Atomic # 1 Polarization: 3.43 SS G_CDS: -2.31 Total: 1.12 kcal Atomic # 6 Polarization: 11.35 SS G_CDS: -2.00 Total: 9.34 kcal Atomic # 7 Polarization: -43.63 SS G_CDS: 0.21 Total: -43.42 kcal Atomic # 8 Polarization: -19.60 SS G_CDS: -0.65 Total: -20.25 kcal Atomic # 9 Polarization: -5.50 SS G_CDS: 0.12 Total: -5.38 kcal Atomic # 14 Polarization: 20.91 SS G_CDS: -5.02 Total: 15.89 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -33.04 -4.78 -37.82 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000270963075.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.770 kcal (2) G-P(sol) polarization free energy of solvation -33.041 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.811 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.784 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.824 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds