Wall clock time and date at job start Tue Mar 31 2020 11:43:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31163 * 1 3 3 Cl 1.73597 * 119.99866 * 2 1 4 4 C 1.50697 * 119.99996 * 179.97438 * 2 1 3 5 5 N 1.46901 * 109.46750 * 115.00388 * 4 2 1 6 6 C 1.48183 * 111.07843 * 70.71092 * 5 4 2 7 7 C 1.53929 * 86.22638 * 137.45871 * 6 5 4 8 8 C 1.47963 * 110.99766 * 170.00050 * 5 4 2 9 9 H 1.09000 * 113.76009 * 336.84480 * 8 5 4 10 10 C 1.52998 * 113.76031 * 108.09744 * 8 5 4 11 11 N 1.46505 * 109.47470 * 303.02187 * 10 8 5 12 12 C 1.46500 * 119.99756 * 270.00188 * 11 10 8 13 13 C 1.34771 * 120.00116 * 89.99486 * 11 10 8 14 14 O 1.21288 * 119.99896 * 0.02562 * 13 11 10 15 15 C 1.50703 * 120.00048 * 180.02562 * 13 11 10 16 16 S 1.81000 * 109.46826 * 180.02562 * 15 13 11 17 17 C 1.76205 * 99.99509 * 180.02562 * 16 15 13 18 18 H 1.08002 * 120.00431 * 0.02562 * 17 16 15 19 19 C 1.38803 * 119.99884 * 180.02562 * 17 16 15 20 20 N 1.31634 * 119.99752 * 359.97438 * 19 17 16 21 21 Si 1.86796 * 119.99976 * 180.27840 * 19 17 16 22 22 H 1.48497 * 109.47173 * 179.72423 * 21 19 17 23 23 H 1.48506 * 109.46866 * 299.71959 * 21 19 17 24 24 H 1.48501 * 109.47438 * 59.72080 * 21 19 17 25 25 H 1.07995 * 119.99891 * 179.97438 * 1 2 3 26 26 H 1.07997 * 119.99948 * 0.02562 * 1 2 3 27 27 H 1.08997 * 109.47052 * 355.00371 * 4 2 1 28 28 H 1.08996 * 109.47171 * 235.00411 * 4 2 1 29 29 H 1.08998 * 113.65487 * 23.13361 * 6 5 4 30 30 H 1.09000 * 113.92456 * 251.82256 * 6 5 4 31 31 H 1.09003 * 113.73414 * 222.01137 * 7 6 5 32 32 H 1.09002 * 113.83150 * 90.74226 * 7 6 5 33 33 H 1.09000 * 109.47145 * 183.02022 * 10 8 5 34 34 H 1.09007 * 109.47138 * 63.02086 * 10 8 5 35 35 H 1.08996 * 109.46996 * 269.99683 * 12 11 10 36 36 H 1.09003 * 109.47400 * 29.99677 * 12 11 10 37 37 H 1.09003 * 109.46993 * 149.99446 * 12 11 10 38 38 H 1.09000 * 109.46926 * 60.00592 * 15 13 11 39 39 H 1.09001 * 109.47144 * 300.00330 * 15 13 11 40 40 H 0.97005 * 119.99723 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3116 0.0000 0.0000 3 17 2.1796 1.5034 0.0000 4 6 2.0651 -1.3051 0.0006 5 7 2.8169 -1.4369 -1.2546 6 6 3.9543 -0.4881 -1.2967 7 6 4.7742 -1.6548 -1.8763 8 6 3.7518 -2.5822 -1.1948 9 1 4.0284 -2.8709 -0.1808 10 6 3.3263 -3.7711 -2.0587 11 7 1.9859 -4.2088 -1.6610 12 6 1.8266 -5.2243 -0.6172 13 6 0.8994 -3.6771 -2.2553 14 8 1.0313 -2.8365 -3.1196 15 6 -0.4794 -4.1269 -1.8458 16 16 -1.7185 -3.2360 -2.8190 17 6 -3.1919 -3.9362 -2.1530 18 1 -3.1312 -4.6835 -1.3756 19 6 -4.4306 -3.5274 -2.6274 20 7 -4.5045 -2.6162 -3.5746 21 14 -5.9928 -4.2640 -1.9159 22 1 -7.1736 -3.6595 -2.5832 23 1 -5.9948 -5.7319 -2.1407 24 1 -6.0518 -3.9864 -0.4583 25 1 -0.5400 -0.9353 -0.0004 26 1 -0.5400 0.9353 -0.0004 27 1 1.3602 -2.1315 0.0905 28 1 2.7572 -1.3247 0.8424 29 1 4.2892 -0.1627 -0.3118 30 1 3.8145 0.3390 -1.9928 31 1 5.7800 -1.7320 -1.4634 32 1 4.7567 -1.7074 -2.9649 33 1 4.0316 -4.5907 -1.9217 34 1 3.3149 -3.4729 -3.1071 35 1 1.8163 -6.2147 -1.0724 36 1 2.6568 -5.1562 0.0858 37 1 0.8881 -5.0577 -0.0883 38 1 -0.6301 -3.9182 -0.7866 39 1 -0.5799 -5.1977 -2.0230 40 1 -5.3703 -2.3303 -3.9059 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001230815337.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:43:09 Heat of formation + Delta-G solvation = 20.966378 kcal Electronic energy + Delta-G solvation = -22985.511937 eV Core-core repulsion = 19568.562403 eV Total energy + Delta-G solvation = -3416.949534 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 318.091 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -40.37597 -38.74131 -36.64562 -35.06764 -33.79576 -32.40597 -30.50981 -29.33166 -27.95432 -26.20842 -25.44360 -24.35125 -23.33865 -19.91368 -19.64814 -19.06126 -17.60742 -16.68736 -16.22010 -15.96679 -15.88205 -15.18382 -14.78827 -14.70311 -14.40364 -13.85966 -13.54776 -13.15510 -12.82349 -12.73759 -12.67621 -12.39538 -12.32140 -12.19453 -11.84276 -11.55919 -11.48115 -11.43877 -11.24017 -11.03152 -11.01356 -10.75000 -10.67028 -10.36514 -9.78248 -9.13323 -9.03918 -9.02169 -8.76758 -8.25549 -8.16829 -6.45853 -6.19229 -3.89069 2.07776 2.37578 3.01665 3.23534 3.26888 3.28826 3.30315 3.63812 3.97006 4.22954 4.40926 4.66345 4.72599 4.93158 5.07792 5.13540 5.15488 5.18402 5.24952 5.30377 5.37789 5.47771 5.52096 5.61929 5.68350 5.70782 5.79780 5.90710 5.95251 5.98814 6.11513 6.16320 6.26297 6.40932 6.46496 6.79874 7.04261 7.60755 7.70950 8.36780 8.79809 9.25905 10.87833 Molecular weight = 318.09amu Principal moments of inertia in cm(-1) A = 0.014299 B = 0.004261 C = 0.003581 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1957.742262 B = 6569.175818 C = 7818.020914 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.077 4.077 3 Cl -0.099 7.099 4 C 0.069 3.931 5 N -0.442 5.442 6 C 0.003 3.997 7 C -0.138 4.138 8 C 0.012 3.988 9 H 0.074 0.926 10 C 0.139 3.861 11 N -0.626 5.626 12 C 0.081 3.919 13 C 0.531 3.469 14 O -0.488 6.488 15 C -0.150 4.150 16 S -0.055 6.055 17 C -0.537 4.537 18 H 0.070 0.930 19 C 0.075 3.925 20 N -0.867 5.867 21 Si 0.915 3.085 22 H -0.283 1.283 23 H -0.274 1.274 24 H -0.274 1.274 25 H 0.129 0.871 26 H 0.112 0.888 27 H 0.092 0.908 28 H 0.046 0.954 29 H 0.067 0.933 30 H 0.089 0.911 31 H 0.069 0.931 32 H 0.094 0.906 33 H 0.074 0.926 34 H 0.089 0.911 35 H 0.052 0.948 36 H 0.062 0.938 37 H 0.071 0.929 38 H 0.082 0.918 39 H 0.084 0.916 40 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 18.424 -0.366 9.735 20.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.103 4.103 3 Cl -0.071 7.071 4 C -0.060 4.060 5 N -0.164 5.164 6 C -0.125 4.125 7 C -0.176 4.176 8 C -0.098 4.098 9 H 0.092 0.908 10 C 0.015 3.985 11 N -0.363 5.363 12 C -0.063 4.063 13 C 0.318 3.682 14 O -0.360 6.360 15 C -0.301 4.301 16 S 0.172 5.828 17 C -0.685 4.685 18 H 0.088 0.912 19 C -0.134 4.134 20 N -0.502 5.502 21 Si 0.742 3.258 22 H -0.208 1.208 23 H -0.200 1.200 24 H -0.200 1.200 25 H 0.147 0.853 26 H 0.130 0.870 27 H 0.110 0.890 28 H 0.064 0.936 29 H 0.085 0.915 30 H 0.108 0.892 31 H 0.088 0.912 32 H 0.112 0.888 33 H 0.092 0.908 34 H 0.108 0.892 35 H 0.071 0.929 36 H 0.081 0.919 37 H 0.090 0.910 38 H 0.100 0.900 39 H 0.102 0.898 40 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 18.039 1.142 7.825 19.696 hybrid contribution -0.704 -1.435 2.381 2.868 sum 17.335 -0.294 10.206 20.119 Atomic orbital electron populations 1.24152 0.93657 1.04317 0.95823 1.22964 0.93681 0.86480 1.07178 1.98332 1.78244 1.33410 1.97158 1.21683 0.98160 0.93729 0.92393 1.68853 1.14531 1.02466 1.30536 1.23947 0.91169 0.96735 1.00677 1.23366 0.97080 0.95285 1.01860 1.23938 0.93071 0.93744 0.99089 0.90798 1.21276 0.83129 0.94224 0.99841 1.47771 1.05811 1.42353 1.40326 1.21719 1.02440 0.91397 0.90697 1.20138 0.85195 0.81157 0.81726 1.90723 1.85746 1.29709 1.29792 1.23568 0.96685 1.04936 1.04889 1.85444 0.94960 1.52806 1.49633 1.22834 0.92114 1.27968 1.25580 0.91208 1.24960 0.98690 0.94916 0.94838 1.70013 1.25624 1.28422 1.26151 0.86281 0.81169 0.79260 0.79127 1.20831 1.19994 1.19986 0.85274 0.87024 0.88963 0.93615 0.91507 0.89229 0.91220 0.88788 0.90763 0.89224 0.92923 0.91880 0.91038 0.90021 0.89790 0.92181 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.09 14.05 28.97 0.41 -1.68 16 2 C -0.08 -1.08 6.00 -36.07 -0.22 -1.30 16 3 Cl -0.10 -1.29 26.52 -51.86 -1.38 -2.67 16 4 C 0.07 0.90 5.21 -4.98 -0.03 0.88 16 5 N -0.44 -6.00 4.97 -231.16 -1.15 -7.15 16 6 C 0.00 0.04 5.95 -2.65 -0.02 0.02 16 7 C -0.14 -1.31 7.84 -25.79 -0.20 -1.52 16 8 C 0.01 0.13 3.58 -66.65 -0.24 -0.11 16 9 H 0.07 0.68 7.79 -51.93 -0.40 0.28 16 10 C 0.14 1.60 5.59 -4.04 -0.02 1.58 16 11 N -0.63 -8.46 2.83 -181.56 -0.51 -8.97 16 12 C 0.08 0.81 10.24 59.85 0.61 1.42 16 13 C 0.53 9.82 7.00 -10.99 -0.08 9.74 16 14 O -0.49 -10.94 14.88 5.55 0.08 -10.85 16 15 C -0.15 -3.00 4.71 36.01 0.17 -2.83 16 16 S -0.06 -1.47 20.57 -107.50 -2.21 -3.69 16 17 C -0.54 -15.08 9.50 30.94 0.29 -14.79 16 18 H 0.07 1.86 7.80 -52.49 -0.41 1.45 16 19 C 0.08 2.13 5.49 -17.43 -0.10 2.03 16 20 N -0.87 -26.00 13.22 55.49 0.73 -25.26 16 21 Si 0.92 21.26 29.55 -169.99 -5.02 16.23 16 22 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 23 H -0.27 -6.24 7.11 56.52 0.40 -5.83 16 24 H -0.27 -6.20 7.11 56.52 0.40 -5.80 16 25 H 0.13 2.03 7.84 -52.49 -0.41 1.62 16 26 H 0.11 1.56 8.06 -52.49 -0.42 1.13 16 27 H 0.09 1.29 7.56 -51.93 -0.39 0.90 16 28 H 0.05 0.52 7.69 -51.93 -0.40 0.12 16 29 H 0.07 0.70 7.31 -51.93 -0.38 0.32 16 30 H 0.09 1.12 8.03 -51.93 -0.42 0.71 16 31 H 0.07 0.52 8.14 -51.93 -0.42 0.09 16 32 H 0.09 0.96 7.92 -51.93 -0.41 0.55 16 33 H 0.07 0.63 8.07 -51.93 -0.42 0.21 16 34 H 0.09 1.24 7.15 -51.93 -0.37 0.87 16 35 H 0.05 0.48 8.14 -51.93 -0.42 0.06 16 36 H 0.06 0.47 8.07 -51.93 -0.42 0.05 16 37 H 0.07 0.74 6.44 -51.93 -0.33 0.41 16 38 H 0.08 1.51 7.40 -51.92 -0.38 1.12 16 39 H 0.08 1.60 8.11 -51.91 -0.42 1.18 16 40 H 0.27 7.52 8.31 -40.82 -0.34 7.18 16 LS Contribution 358.87 15.07 5.41 5.41 Total: -1.00 -33.51 358.87 -9.44 -42.95 By element: Atomic # 1 Polarization: 6.53 SS G_CDS: -5.98 Total: 0.55 kcal Atomic # 6 Polarization: -7.13 SS G_CDS: 0.59 Total: -6.54 kcal Atomic # 7 Polarization: -40.46 SS G_CDS: -0.93 Total: -41.38 kcal Atomic # 8 Polarization: -10.94 SS G_CDS: 0.08 Total: -10.85 kcal Atomic # 14 Polarization: 21.26 SS G_CDS: -5.02 Total: 16.23 kcal Atomic # 16 Polarization: -1.47 SS G_CDS: -2.21 Total: -3.69 kcal Atomic # 17 Polarization: -1.29 SS G_CDS: -1.38 Total: -2.67 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -33.51 -9.44 -42.95 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001230815337.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 63.914 kcal (2) G-P(sol) polarization free energy of solvation -33.510 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.437 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.947 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.966 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds