Wall clock time and date at job start Tue Mar 31 2020 12:10:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.42900 * 109.47098 * 2 1 4 4 C 1.35977 * 117.00189 * 180.02562 * 3 2 1 5 5 C 1.38701 * 120.00179 * 359.72808 * 4 3 2 6 6 C 1.38126 * 120.00213 * 179.76446 * 5 4 3 7 7 C 1.38701 * 120.00151 * 0.50910 * 6 5 4 8 8 O 1.35983 * 120.00483 * 179.72509 * 7 6 5 9 9 C 1.42902 * 116.99469 * 0.02562 * 8 7 6 10 10 C 1.53006 * 109.46794 * 180.02562 * 9 8 7 11 11 N 1.46894 * 109.47423 * 64.99668 * 10 9 8 12 12 C 1.46894 * 110.99911 * 190.00248 * 11 10 9 13 13 C 1.50706 * 109.47060 * 168.78937 * 12 11 10 14 14 H 1.07995 * 120.00086 * 355.02587 * 13 12 11 15 15 C 1.37877 * 120.00143 * 175.02981 * 13 12 11 16 16 N 1.31517 * 119.99842 * 359.97438 * 15 13 12 17 17 Si 1.86800 * 120.00329 * 180.02562 * 15 13 12 18 18 H 1.48507 * 109.46827 * 59.99847 * 17 15 13 19 19 H 1.48494 * 109.47324 * 179.97438 * 17 15 13 20 20 H 1.48500 * 109.46878 * 300.00224 * 17 15 13 21 21 C 1.46896 * 111.00075 * 66.04351 * 11 10 9 22 22 C 1.53008 * 109.46906 * 61.25025 * 21 11 10 23 23 C 1.47201 * 109.47029 * 179.36844 * 22 21 11 24 24 N 9.12530 * 126.21513 * 324.30105 * 4 1 2 25 25 C 1.38697 * 119.99567 * 359.73836 * 7 6 5 26 26 C 1.38128 * 120.00254 * 0.02562 * 25 7 6 27 27 H 1.08997 * 109.46806 * 180.02562 * 1 2 3 28 28 H 1.09004 * 109.46971 * 299.99982 * 1 2 3 29 29 H 1.09000 * 109.46839 * 60.00075 * 1 2 3 30 30 H 1.09004 * 109.46971 * 240.00018 * 2 1 3 31 31 H 1.09003 * 109.47333 * 119.99850 * 2 1 3 32 32 H 1.07999 * 119.99694 * 359.97438 * 5 4 3 33 33 H 1.07995 * 120.00179 * 180.23040 * 6 5 4 34 34 H 1.09003 * 109.47113 * 300.00082 * 9 8 7 35 35 H 1.08998 * 109.47416 * 60.00348 * 9 8 7 36 36 H 1.09000 * 109.46733 * 185.00080 * 10 9 8 37 37 H 1.09004 * 109.46803 * 304.99652 * 10 9 8 38 38 H 1.09001 * 109.47193 * 288.78603 * 12 11 10 39 39 H 1.09003 * 109.47699 * 48.79150 * 12 11 10 40 40 H 0.97001 * 119.99922 * 179.97438 * 16 15 13 41 41 H 1.09003 * 109.47372 * 181.24530 * 21 11 10 42 42 H 1.08995 * 109.47377 * 301.25371 * 21 11 10 43 43 H 1.08994 * 109.47243 * 299.37452 * 22 21 11 44 44 H 1.09000 * 109.46777 * 59.37379 * 22 21 11 45 45 H 1.07998 * 120.00037 * 179.97438 * 25 7 6 46 46 H 1.08007 * 120.00049 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.3544 1.5255 -0.0005 5 6 4.1994 0.4256 0.0046 6 6 5.5687 0.6066 -0.0008 7 6 6.0989 1.8883 -0.0008 8 8 7.4470 2.0665 -0.0006 9 6 8.2569 0.8892 -0.0009 10 6 9.7345 1.2868 0.0002 11 7 10.0546 1.9785 1.2559 12 6 11.3925 2.5822 1.1980 13 6 11.5787 3.5047 2.3751 14 1 10.7564 3.6923 3.0494 15 6 12.7990 4.1092 2.5909 16 7 13.8006 3.8804 1.7699 17 14 13.0300 5.2521 4.0503 18 1 12.7713 4.5068 5.3085 19 1 14.4222 5.7687 4.0590 20 1 12.0803 6.3888 3.9440 21 6 9.9368 1.0686 2.4030 22 6 10.9281 -0.0858 2.2422 23 6 10.8206 -0.9896 3.3991 24 7 10.7372 -1.6836 4.2967 25 6 5.2539 2.9882 -0.0008 26 6 3.8846 2.8072 -0.0003 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 1.8933 -0.5139 -0.8900 31 1 1.8934 -0.5138 0.8900 32 1 3.7866 -0.5724 0.0095 33 1 6.2266 -0.2498 -0.0006 34 1 8.0394 0.2983 0.8889 35 1 8.0398 0.2990 -0.8911 36 1 10.3513 0.3926 -0.0897 37 1 9.9326 1.9509 -0.8412 38 1 12.1474 1.7965 1.2292 39 1 11.4959 3.1487 0.2725 40 1 14.6589 4.3060 1.9215 41 1 10.1577 1.6117 3.3219 42 1 8.9224 0.6725 2.4499 43 1 10.7004 -0.6358 1.3291 44 1 11.9416 0.3111 2.1841 45 1 5.6667 3.9862 -0.0004 46 1 3.2266 3.6637 0.0001 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000176108619.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:10:58 Heat of formation + Delta-G solvation = -18.759586 kcal Electronic energy + Delta-G solvation = -25759.783827 eV Core-core repulsion = 22036.624719 eV Total energy + Delta-G solvation = -3723.159108 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 318.173 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -40.42836 -39.15938 -37.87984 -36.41166 -35.82145 -32.74819 -32.07973 -31.27541 -30.80679 -29.59822 -28.28073 -26.22821 -24.57751 -24.17335 -22.95258 -21.66666 -21.57138 -19.65330 -18.56937 -17.78726 -17.41327 -16.41034 -16.34175 -16.20032 -16.01561 -14.93736 -14.86682 -14.70417 -14.33514 -14.12216 -13.76912 -13.69557 -13.52621 -13.45049 -13.39524 -12.82839 -12.70575 -12.38379 -12.24727 -12.15403 -12.05013 -11.89134 -11.68446 -11.44474 -11.36151 -11.17091 -10.95267 -10.78548 -10.66056 -10.57754 -10.33278 -10.15188 -9.84528 -9.30354 -9.12130 -8.48069 -7.69270 -7.39474 -6.08155 -4.09264 1.20898 1.47622 3.02959 3.03820 3.05834 3.32636 3.36900 3.40340 3.43111 3.71897 4.26138 4.40036 4.57279 4.59710 4.71460 4.75014 4.80115 4.91329 5.07614 5.12836 5.21284 5.27591 5.30122 5.34451 5.39849 5.42427 5.44372 5.46966 5.56811 5.67464 5.70579 5.82167 5.89368 6.05728 6.14397 6.21972 6.22433 6.34728 6.55725 6.57768 7.13374 7.18564 7.26767 7.62810 7.73262 7.82197 7.96996 8.04705 8.42459 8.98461 9.55783 11.02057 Molecular weight = 318.17amu Principal moments of inertia in cm(-1) A = 0.014521 B = 0.002623 C = 0.002412 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1927.733912 B =10673.727501 C =11605.241628 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.055 3.945 3 O -0.319 6.319 4 C 0.081 3.919 5 C -0.169 4.169 6 C -0.177 4.177 7 C 0.107 3.893 8 O -0.288 6.288 9 C 0.064 3.936 10 C 0.046 3.954 11 N -0.519 5.519 12 C 0.187 3.813 13 C -0.508 4.508 14 H 0.064 0.936 15 C 0.058 3.942 16 N -0.898 5.898 17 Si 0.895 3.105 18 H -0.277 1.277 19 H -0.289 1.289 20 H -0.276 1.276 21 C 0.069 3.931 22 C -0.075 4.075 23 C 0.223 3.777 24 N -0.460 5.460 25 C -0.113 4.113 26 C -0.111 4.111 27 H 0.076 0.924 28 H 0.065 0.935 29 H 0.065 0.935 30 H 0.059 0.941 31 H 0.059 0.941 32 H 0.125 0.875 33 H 0.129 0.871 34 H 0.060 0.940 35 H 0.057 0.943 36 H 0.053 0.947 37 H 0.085 0.915 38 H 0.004 0.996 39 H 0.031 0.969 40 H 0.262 0.738 41 H 0.094 0.906 42 H 0.062 0.938 43 H 0.098 0.902 44 H 0.123 0.877 45 H 0.140 0.860 46 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.929 -8.608 -7.667 23.023 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.020 4.020 3 O -0.234 6.234 4 C 0.036 3.964 5 C -0.187 4.187 6 C -0.195 4.195 7 C 0.061 3.939 8 O -0.201 6.201 9 C -0.012 4.012 10 C -0.083 4.083 11 N -0.241 5.241 12 C 0.062 3.938 13 C -0.547 4.547 14 H 0.082 0.918 15 C -0.144 4.144 16 N -0.537 5.537 17 Si 0.723 3.277 18 H -0.203 1.203 19 H -0.214 1.214 20 H -0.201 1.201 21 C -0.062 4.062 22 C -0.117 4.117 23 C -0.094 4.094 24 N -0.138 5.138 25 C -0.132 4.132 26 C -0.129 4.129 27 H 0.095 0.905 28 H 0.085 0.915 29 H 0.084 0.916 30 H 0.077 0.923 31 H 0.077 0.923 32 H 0.143 0.857 33 H 0.146 0.854 34 H 0.078 0.922 35 H 0.075 0.925 36 H 0.071 0.929 37 H 0.103 0.897 38 H 0.022 0.978 39 H 0.049 0.951 40 H 0.072 0.928 41 H 0.112 0.888 42 H 0.081 0.919 43 H 0.116 0.884 44 H 0.141 0.859 45 H 0.158 0.842 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -20.228 -8.875 -6.312 22.973 hybrid contribution 1.024 -0.314 0.295 1.111 sum -19.204 -9.189 -6.017 22.123 Atomic orbital electron populations 1.21769 0.92922 1.02712 1.03482 1.22716 0.95709 0.82403 1.01183 1.86051 1.19102 1.28747 1.89533 1.18814 0.82162 0.94069 1.01311 1.20971 0.93570 0.97917 1.06278 1.21060 0.95426 0.96412 1.06644 1.19037 0.84095 0.93211 0.97521 1.86301 1.12648 1.33275 1.87860 1.22972 0.91304 0.86583 1.00342 1.22213 0.91576 0.98708 0.95766 1.62373 1.33210 1.28868 0.99695 1.19870 0.81647 0.93909 0.98358 1.21089 0.96520 1.26559 1.10514 0.91786 1.24951 0.95923 0.96875 0.96651 1.69926 1.02518 1.44066 1.37219 0.86602 0.77020 0.81252 0.82829 1.20312 1.21431 1.20101 1.22126 0.95800 0.90422 0.97805 1.20274 1.06494 0.94635 0.90322 1.29347 0.92402 0.93202 0.94469 1.81216 1.09903 1.11449 1.11278 1.20314 0.91106 0.98464 1.03316 1.20219 0.94189 0.94893 1.03637 0.90530 0.91541 0.91567 0.92297 0.92259 0.85704 0.85366 0.92177 0.92507 0.92939 0.89704 0.97800 0.95078 0.92832 0.88782 0.91945 0.88382 0.85885 0.84202 0.84771 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.87 10.28 37.16 0.38 -0.49 16 2 C 0.06 0.42 5.46 37.16 0.20 0.62 16 3 O -0.32 -3.50 10.14 -19.67 -0.20 -3.70 16 4 C 0.08 0.95 6.69 -39.24 -0.26 0.69 16 5 C -0.17 -1.85 9.03 -39.45 -0.36 -2.21 16 6 C -0.18 -2.08 9.03 -39.45 -0.36 -2.43 16 7 C 0.11 1.46 6.69 -39.24 -0.26 1.20 16 8 O -0.29 -4.35 10.09 -19.69 -0.20 -4.55 16 9 C 0.06 0.79 4.80 37.16 0.18 0.97 16 10 C 0.05 0.65 5.12 -3.82 -0.02 0.64 16 11 N -0.52 -9.42 4.64 -236.07 -1.10 -10.52 16 12 C 0.19 4.21 4.54 -4.98 -0.02 4.18 16 13 C -0.51 -13.10 8.39 -34.44 -0.29 -13.39 16 14 H 0.06 1.67 7.39 -52.49 -0.39 1.28 16 15 C 0.06 1.54 5.46 -17.82 -0.10 1.44 16 16 N -0.90 -25.01 13.29 55.43 0.74 -24.28 16 17 Si 0.90 20.97 29.54 -169.99 -5.02 15.95 16 18 H -0.28 -6.46 7.11 56.52 0.40 -6.05 16 19 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 20 H -0.28 -6.44 7.11 56.52 0.40 -6.03 16 21 C 0.07 1.11 4.91 -3.82 -0.02 1.09 16 22 C -0.08 -1.06 5.05 -29.51 -0.15 -1.21 16 23 C 0.22 3.50 15.44 -20.71 -0.32 3.18 16 24 N -0.46 -8.21 18.55 42.22 0.78 -7.43 16 25 C -0.11 -1.45 9.98 -39.45 -0.39 -1.84 16 26 C -0.11 -1.30 9.98 -39.45 -0.39 -1.69 16 27 H 0.08 0.30 8.14 -51.93 -0.42 -0.13 16 28 H 0.07 0.40 8.14 -51.93 -0.42 -0.03 16 29 H 0.07 0.38 8.14 -51.93 -0.42 -0.04 16 30 H 0.06 0.40 7.67 -51.93 -0.40 0.00 16 31 H 0.06 0.42 7.65 -51.93 -0.40 0.02 16 32 H 0.13 1.08 6.29 -52.49 -0.33 0.75 16 33 H 0.13 1.28 6.29 -52.49 -0.33 0.95 16 34 H 0.06 0.71 5.83 -51.93 -0.30 0.40 16 35 H 0.06 0.57 7.66 -51.93 -0.40 0.17 16 36 H 0.05 0.64 6.05 -51.93 -0.31 0.32 16 37 H 0.08 1.28 7.92 -51.93 -0.41 0.87 16 38 H 0.00 0.10 6.02 -51.93 -0.31 -0.21 16 39 H 0.03 0.77 7.91 -51.93 -0.41 0.36 16 40 H 0.26 7.02 8.31 -40.82 -0.34 6.68 16 41 H 0.09 1.75 6.98 -51.93 -0.36 1.39 16 42 H 0.06 0.90 6.32 -51.93 -0.33 0.57 16 43 H 0.10 1.09 6.33 -51.93 -0.33 0.76 16 44 H 0.12 1.96 6.28 -51.93 -0.33 1.64 16 45 H 0.14 1.67 8.06 -52.49 -0.42 1.25 16 46 H 0.13 1.33 8.06 -52.48 -0.42 0.91 16 LS Contribution 379.85 15.07 5.72 5.72 Total: -1.00 -30.53 379.85 -8.04 -38.57 By element: Atomic # 1 Polarization: 6.06 SS G_CDS: -6.59 Total: -0.53 kcal Atomic # 6 Polarization: -7.06 SS G_CDS: -2.18 Total: -9.24 kcal Atomic # 7 Polarization: -42.65 SS G_CDS: 0.42 Total: -42.22 kcal Atomic # 8 Polarization: -7.85 SS G_CDS: -0.40 Total: -8.25 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -5.02 Total: 15.95 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -30.53 -8.04 -38.57 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000176108619.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.807 kcal (2) G-P(sol) polarization free energy of solvation -30.531 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.724 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.035 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.566 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds