Wall clock time and date at job start Tue Mar 31 2020 12:28:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52999 * 109.47117 * 2 1 4 4 N 1.46904 * 109.47022 * 181.67682 * 3 2 1 5 5 C 1.46903 * 111.00208 * 71.53717 * 4 3 2 6 6 C 1.52998 * 109.47030 * 69.48635 * 5 4 3 7 7 C 1.46901 * 111.00231 * 195.49050 * 4 3 2 8 8 C 1.52991 * 109.47536 * 159.94694 * 7 4 3 9 9 H 1.09002 * 109.47166 * 299.76114 * 8 7 4 10 10 C 1.52999 * 109.47422 * 179.75518 * 8 7 4 11 11 N 1.46506 * 109.47070 * 59.75776 * 8 7 4 12 12 C 1.34773 * 119.99935 * 221.46897 * 11 8 7 13 13 O 1.21588 * 120.00267 * 359.97438 * 12 11 8 14 14 C 1.47638 * 119.99982 * 179.97438 * 12 11 8 15 15 C 1.40017 * 119.89503 * 359.72179 * 14 12 11 16 16 C 1.36314 * 120.10587 * 179.75558 * 15 14 12 17 17 C 1.40882 * 119.89566 * 0.52237 * 16 15 14 18 18 C 1.41104 * 120.10776 * 179.71448 * 17 16 15 19 19 H 1.08007 * 119.99906 * 156.91990 * 18 17 16 20 20 C 1.40229 * 120.00021 * 336.92391 * 18 17 16 21 21 N 1.30650 * 119.99747 * 333.16251 * 20 18 17 22 22 Si 1.86791 * 120.00238 * 153.16534 * 20 18 17 23 23 H 1.48501 * 109.47322 * 94.98427 * 22 20 18 24 24 H 1.48500 * 109.47444 * 214.98619 * 22 20 18 25 25 H 1.48505 * 109.47292 * 334.98629 * 22 20 18 26 26 C 1.40894 * 119.79144 * 359.73130 * 17 16 15 27 27 C 1.36319 * 119.88808 * 0.02562 * 26 17 16 28 28 H 1.08996 * 109.46922 * 300.00060 * 1 2 3 29 29 H 1.08997 * 109.47190 * 59.99828 * 1 2 3 30 30 H 1.09001 * 109.47030 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47395 * 240.00172 * 2 1 3 32 32 H 1.08997 * 109.47190 * 120.00172 * 2 1 3 33 33 H 1.08998 * 109.47091 * 61.67719 * 3 2 1 34 34 H 1.08998 * 109.47364 * 301.67368 * 3 2 1 35 35 H 1.08995 * 109.47206 * 189.49051 * 5 4 3 36 36 H 1.08999 * 109.46829 * 309.48748 * 5 4 3 37 37 H 1.08999 * 109.47006 * 186.81254 * 6 5 4 38 38 H 1.09002 * 109.47119 * 306.81345 * 6 5 4 39 39 H 1.09001 * 109.47069 * 66.81543 * 6 5 4 40 40 H 1.09008 * 109.46986 * 39.95015 * 7 4 3 41 41 H 1.09000 * 109.47003 * 279.95369 * 7 4 3 42 42 H 1.09009 * 109.46819 * 60.00284 * 10 8 7 43 43 H 1.09002 * 109.47437 * 300.00430 * 10 8 7 44 44 H 1.09003 * 109.47409 * 179.97438 * 10 8 7 45 45 H 0.97001 * 119.99846 * 41.46503 * 11 8 7 46 46 H 1.08003 * 119.94356 * 0.02562 * 15 14 12 47 47 H 1.08005 * 120.05295 * 180.23078 * 16 15 14 48 48 H 0.96995 * 120.00032 * 180.02562 * 21 20 18 49 49 H 1.07997 * 120.05290 * 179.97438 * 26 17 16 50 50 H 1.08007 * 119.94129 * 179.97438 * 27 26 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5085 1.4427 -0.0405 5 6 3.9988 1.0211 -1.3596 6 6 3.6810 2.1046 -2.3920 7 6 4.0451 2.7607 0.3240 8 6 5.5053 2.6151 0.7565 9 1 5.5642 1.9515 1.6193 10 6 6.0660 3.9887 1.1303 11 7 6.2877 2.0521 -0.3468 12 6 7.2199 1.1106 -0.1002 13 8 7.4121 0.7288 1.0381 14 6 8.0080 0.5429 -1.2121 15 6 7.7809 0.9800 -2.5228 16 6 8.5094 0.4624 -3.5521 17 6 9.4845 -0.5219 -3.2969 18 6 10.2370 -1.0652 -4.3597 19 1 11.2000 -1.5140 -4.1654 20 6 9.7346 -1.0222 -5.6682 21 7 8.4445 -0.9883 -5.8718 22 14 10.9097 -1.0137 -7.1201 23 1 11.0952 -2.4014 -7.6150 24 1 10.3481 -0.1716 -8.2067 25 1 12.2204 -0.4612 -6.6930 26 6 9.7057 -0.9624 -1.9770 27 6 8.9757 -0.4353 -0.9535 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 1.8934 -0.5138 -0.8900 32 1 1.8933 -0.5138 0.8899 33 1 1.7014 1.9476 0.9046 34 1 1.6524 1.9649 -0.8746 35 1 5.0769 0.8674 -1.3143 36 1 3.5109 0.0901 -1.6480 37 1 3.9344 1.7426 -3.3884 38 1 2.6183 2.3442 -2.3518 39 1 4.2637 2.9990 -2.1712 40 1 3.4622 3.1755 1.1464 41 1 3.9856 3.4277 -0.5361 42 1 5.4839 4.4075 1.9513 43 1 6.0070 4.6523 0.2676 44 1 7.1062 3.8849 1.4389 45 1 6.1346 2.3570 -1.2549 46 1 7.0303 1.7317 -2.7180 47 1 8.3361 0.8028 -4.5623 48 1 8.0969 -0.9590 -6.7768 49 1 10.4519 -1.7171 -1.7766 50 1 9.1443 -0.7727 0.0585 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000358349881.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:28:39 Heat of formation + Delta-G solvation = -24.586357 kcal Electronic energy + Delta-G solvation = -27437.913166 eV Core-core repulsion = 23850.334485 eV Total energy + Delta-G solvation = -3587.578681 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 318.205 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -39.73661 -38.22365 -37.04063 -35.05303 -33.89491 -33.09060 -31.63906 -30.00414 -29.46764 -29.27097 -26.75601 -25.85962 -24.79961 -22.91933 -21.98875 -21.07717 -20.51360 -19.88304 -19.57849 -17.52329 -16.71372 -16.41900 -15.97400 -15.51807 -15.25212 -14.65668 -14.35230 -14.01305 -13.83595 -13.76235 -13.60760 -13.31307 -12.99052 -12.77141 -12.60101 -12.41551 -12.18377 -12.12852 -12.09367 -11.89232 -11.75883 -11.62572 -11.38325 -11.30070 -11.24665 -11.06258 -10.96006 -10.91753 -10.65634 -10.64094 -10.39037 -10.09140 -9.54015 -9.27173 -8.87650 -8.48822 -8.04663 -7.71552 -7.57711 -7.12373 -4.57695 2.27417 2.87911 2.93491 3.01140 3.04513 3.72254 3.84628 3.89033 3.92031 4.54528 4.80698 4.94800 4.97515 5.06996 5.23235 5.29052 5.34716 5.40673 5.43057 5.49987 5.56391 5.58192 5.60496 5.63003 5.69515 5.79514 5.90604 5.94597 6.00231 6.03749 6.05929 6.14355 6.21252 6.25080 6.33384 6.41005 6.49162 6.76542 6.81386 6.98987 7.11165 7.13228 7.16858 7.20025 7.43435 7.67462 7.77856 7.86372 8.06815 8.30572 8.38103 8.62059 8.76041 9.17388 9.81232 Molecular weight = 318.20amu Principal moments of inertia in cm(-1) A = 0.013920 B = 0.003324 C = 0.002963 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2011.043252 B = 8421.219219 C = 9448.039707 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.121 4.121 3 C 0.051 3.949 4 N -0.529 5.529 5 C 0.028 3.972 6 C -0.192 4.192 7 C 0.040 3.960 8 C 0.144 3.856 9 H 0.101 0.899 10 C -0.161 4.161 11 N -0.732 5.732 12 C 0.574 3.426 13 O -0.573 6.573 14 C -0.288 4.288 15 C -0.059 4.059 16 C -0.185 4.185 17 C 0.131 3.869 18 C -0.446 4.446 19 H 0.086 0.914 20 C 0.081 3.919 21 N -0.759 5.759 22 Si 0.905 3.095 23 H -0.267 1.267 24 H -0.272 1.272 25 H -0.256 1.256 26 C -0.242 4.242 27 C -0.018 4.018 28 H 0.052 0.948 29 H 0.050 0.950 30 H 0.054 0.946 31 H 0.063 0.937 32 H 0.069 0.931 33 H 0.068 0.932 34 H 0.034 0.966 35 H 0.104 0.896 36 H 0.072 0.928 37 H 0.065 0.935 38 H 0.052 0.948 39 H 0.055 0.945 40 H 0.078 0.922 41 H 0.045 0.955 42 H 0.060 0.940 43 H 0.052 0.948 44 H 0.062 0.938 45 H 0.394 0.606 46 H 0.085 0.915 47 H 0.110 0.890 48 H 0.287 0.713 49 H 0.097 0.903 50 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.679 7.326 3.807 14.303 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.159 4.159 3 C -0.077 4.077 4 N -0.252 5.252 5 C -0.100 4.100 6 C -0.251 4.251 7 C -0.088 4.088 8 C 0.038 3.962 9 H 0.119 0.881 10 C -0.220 4.220 11 N -0.385 5.385 12 C 0.368 3.632 13 O -0.454 6.454 14 C -0.293 4.293 15 C -0.078 4.078 16 C -0.204 4.204 17 C 0.128 3.872 18 C -0.473 4.473 19 H 0.104 0.896 20 C -0.142 4.142 21 N -0.381 5.381 22 Si 0.728 3.272 23 H -0.192 1.192 24 H -0.197 1.197 25 H -0.179 1.179 26 C -0.261 4.261 27 C -0.037 4.037 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.074 0.926 31 H 0.082 0.918 32 H 0.088 0.912 33 H 0.086 0.914 34 H 0.053 0.947 35 H 0.122 0.878 36 H 0.090 0.910 37 H 0.084 0.916 38 H 0.071 0.929 39 H 0.074 0.926 40 H 0.096 0.904 41 H 0.063 0.937 42 H 0.079 0.921 43 H 0.071 0.929 44 H 0.081 0.919 45 H 0.230 0.770 46 H 0.103 0.897 47 H 0.128 0.872 48 H 0.098 0.902 49 H 0.115 0.885 50 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -11.582 6.707 4.794 14.216 hybrid contribution -0.094 0.777 -1.921 2.074 sum -11.675 7.485 2.873 14.163 Atomic orbital electron populations 1.21732 0.95984 1.01611 1.01415 1.21519 0.94829 0.96638 1.02950 1.22208 0.87943 0.97156 1.00369 1.62133 1.07315 1.26854 1.28868 1.22684 1.03967 0.97393 0.85988 1.22431 1.01164 1.00487 1.01026 1.22564 0.95711 0.90288 1.00261 1.20858 0.88504 0.94762 0.92034 0.88145 1.22162 1.01964 0.96753 1.01097 1.46134 1.39683 1.42763 1.09948 1.18519 0.78233 0.77485 0.88914 1.90624 1.68812 1.62303 1.23702 1.18881 1.08160 1.10320 0.91907 1.20395 0.97365 0.97555 0.92464 1.20777 1.01441 1.00501 0.97707 1.17718 0.89309 0.88342 0.91867 1.19813 1.04298 1.32226 0.90975 0.89582 1.26093 0.95305 0.91605 1.01188 1.69797 1.13768 1.29911 1.24632 0.86336 0.81725 0.79403 0.79700 1.19198 1.19685 1.17936 1.20678 1.06219 1.05872 0.93331 1.20358 0.92802 0.92993 0.97589 0.92903 0.93073 0.92649 0.91839 0.91213 0.91391 0.94745 0.87771 0.91004 0.91581 0.92917 0.92631 0.90378 0.93720 0.92096 0.92879 0.91931 0.77017 0.89689 0.87167 0.90155 0.88477 0.88167 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.28 9.91 37.16 0.37 -0.91 16 2 C -0.12 -1.29 6.01 -26.73 -0.16 -1.45 16 3 C 0.05 0.55 4.87 -3.82 -0.02 0.53 16 4 N -0.53 -6.85 4.60 -234.63 -1.08 -7.93 16 5 C 0.03 0.38 5.38 -3.82 -0.02 0.36 16 6 C -0.19 -2.27 8.86 37.16 0.33 -1.94 16 7 C 0.04 0.47 4.63 -3.83 -0.02 0.46 16 8 C 0.14 2.04 3.10 -67.93 -0.21 1.83 16 9 H 0.10 1.70 7.11 -51.93 -0.37 1.33 16 10 C -0.16 -1.92 9.52 37.16 0.35 -1.57 16 11 N -0.73 -12.05 2.74 -54.81 -0.15 -12.20 16 12 C 0.57 12.08 7.16 -12.42 -0.09 11.99 16 13 O -0.57 -13.67 15.75 5.29 0.08 -13.59 16 14 C -0.29 -6.52 5.89 -104.73 -0.62 -7.13 16 15 C -0.06 -1.28 9.47 -39.61 -0.38 -1.65 16 16 C -0.19 -4.46 8.68 -39.27 -0.34 -4.80 16 17 C 0.13 3.30 5.57 -106.81 -0.59 2.71 16 18 C -0.45 -11.02 8.99 -37.75 -0.34 -11.36 16 19 H 0.09 2.04 7.98 -52.48 -0.42 1.62 16 20 C 0.08 1.87 4.92 -17.31 -0.09 1.79 16 21 N -0.76 -17.90 11.44 55.56 0.64 -17.27 16 22 Si 0.91 16.99 29.64 -169.99 -5.04 11.95 16 23 H -0.27 -4.95 7.11 56.52 0.40 -4.55 16 24 H -0.27 -4.98 7.11 56.52 0.40 -4.58 16 25 H -0.26 -4.82 7.11 56.52 0.40 -4.42 16 26 C -0.24 -5.85 9.73 -39.27 -0.38 -6.23 16 27 C -0.02 -0.43 9.52 -39.61 -0.38 -0.81 16 28 H 0.05 0.41 8.14 -51.93 -0.42 -0.01 16 29 H 0.05 0.42 8.14 -51.93 -0.42 -0.01 16 30 H 0.05 0.45 8.14 -51.93 -0.42 0.03 16 31 H 0.06 0.73 6.53 -51.93 -0.34 0.39 16 32 H 0.07 0.81 8.14 -51.93 -0.42 0.39 16 33 H 0.07 0.67 7.69 -51.93 -0.40 0.27 16 34 H 0.03 0.36 6.13 -51.93 -0.32 0.04 16 35 H 0.10 1.73 4.56 -51.93 -0.24 1.49 16 36 H 0.07 1.02 6.36 -51.93 -0.33 0.69 16 37 H 0.07 0.80 8.14 -51.93 -0.42 0.37 16 38 H 0.05 0.57 6.25 -51.93 -0.32 0.24 16 39 H 0.05 0.63 5.75 -51.93 -0.30 0.33 16 40 H 0.08 0.79 7.65 -51.92 -0.40 0.39 16 41 H 0.04 0.49 5.54 -51.93 -0.29 0.20 16 42 H 0.06 0.60 8.14 -51.92 -0.42 0.17 16 43 H 0.05 0.58 8.14 -51.93 -0.42 0.15 16 44 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 45 H 0.39 5.99 4.77 -40.82 -0.19 5.79 16 46 H 0.09 1.58 6.37 -52.48 -0.33 1.24 16 47 H 0.11 2.68 6.38 -52.48 -0.34 2.34 16 48 H 0.29 6.06 8.29 -40.82 -0.34 5.72 16 49 H 0.10 2.21 8.06 -52.49 -0.42 1.78 16 50 H 0.10 2.31 7.63 -52.48 -0.40 1.91 16 LS Contribution 385.89 15.07 5.82 5.82 Total: -1.00 -27.40 385.89 -10.23 -37.63 By element: Atomic # 1 Polarization: 21.70 SS G_CDS: -7.92 Total: 13.78 kcal Atomic # 6 Polarization: -15.62 SS G_CDS: -2.58 Total: -18.19 kcal Atomic # 7 Polarization: -36.80 SS G_CDS: -0.59 Total: -37.39 kcal Atomic # 8 Polarization: -13.67 SS G_CDS: 0.08 Total: -13.59 kcal Atomic # 14 Polarization: 16.99 SS G_CDS: -5.04 Total: 11.95 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -27.40 -10.23 -37.63 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000358349881.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.045 kcal (2) G-P(sol) polarization free energy of solvation -27.397 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.234 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.631 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds